Package omero.api
-
Interface Summary Interface Description _ClientCallbackOperations Primary callback interface for interaction between client and server session (""ServiceFactory"")._ClientCallbackOperationsNC Primary callback interface for interaction between client and server session (""ServiceFactory"")._ExporterOperations Stateful service for generating OME-XML or OME-TIFF from data stored in OMERO._ExporterOperationsNC Stateful service for generating OME-XML or OME-TIFF from data stored in OMERO._IAdminOperations Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions._IAdminOperationsNC Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions._IConfigOperations Access to server configuration._IConfigOperationsNC Access to server configuration._IContainerOperations Provides methods for dealing with the core Pojos of OME._IContainerOperationsNC Provides methods for dealing with the core Pojos of OME._ILdapOperations Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions._ILdapOperationsNC Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions._IMetadataOperations Provides method to interact with acquisition metadata and annotations._IMetadataOperationsNC Provides method to interact with acquisition metadata and annotations._IPixelsOperations Metadata gateway for theRenderingEngine
and clients._IPixelsOperationsNC Metadata gateway for theRenderingEngine
and clients._IProjectionOperations Provides methods for performing projections of Pixels sets._IProjectionOperationsNC Provides methods for performing projections of Pixels sets._IQueryOperations Provides methods for directly querying object graphs._IQueryOperationsNC Provides methods for directly querying object graphs._IRenderingSettingsOperations Provides method to apply rendering settings to a collection of images._IRenderingSettingsOperationsNC Provides method to apply rendering settings to a collection of images._IRepositoryInfoOperations Provides methods for obtaining information for server repository disk space allocation._IRepositoryInfoOperationsNC Provides methods for obtaining information for server repository disk space allocation._IRoiOperations Interface for working with regions of interest._IRoiOperationsNC Interface for working with regions of interest._IScriptOperations Utility service for managing and launching scripts for execution by the Processor API._IScriptOperationsNC Utility service for managing and launching scripts for execution by the Processor API._ISessionOperations Session
creation service for OMERO._ISessionOperationsNC Session
creation service for OMERO._IShareOperations Provides method for sharing - collaboration process for images, datasets, projects._IShareOperationsNC Provides method for sharing - collaboration process for images, datasets, projects._ITimelineOperations Service for the querying of OMERO metadata based on creation and modification time._ITimelineOperationsNC Service for the querying of OMERO metadata based on creation and modification time._ITypesOperations Access to reflective type information._ITypesOperationsNC Access to reflective type information._IUpdateOperations Provides methods for directly updating object graphs._IUpdateOperationsNC Provides methods for directly updating object graphs._JobHandleOperations Allows submission of asynchronous jobs._JobHandleOperationsNC Allows submission of asynchronous jobs._MetadataStoreOperations Server-side interface for import._MetadataStoreOperationsNC Server-side interface for import._PyramidServiceOperations _PyramidServiceOperationsNC _RawFileStoreOperations Raw file gateway which provides access to the OMERO file repository._RawFileStoreOperationsNC Raw file gateway which provides access to the OMERO file repository._RawPixelsStoreOperations Binary data provider._RawPixelsStoreOperationsNC Binary data provider._RenderingEngineOperations Defines a service to render a given pixels set._RenderingEngineOperationsNC Defines a service to render a given pixels set._SearchOperations Central search interface, allowing Web2.0 style queries._SearchOperationsNC Central search interface, allowing Web2.0 style queries._ServiceFactoryOperations Starting point for all OMERO.blitz interaction._ServiceFactoryOperationsNC Starting point for all OMERO.blitz interaction._ServiceInterfaceOperations Service marker similar to ome.api.ServiceInterface._ServiceInterfaceOperationsNC Service marker similar to ome.api.ServiceInterface._StatefulServiceInterfaceOperations Service marker for stateful services which permits the closing of a particular service before the destruction of the session._StatefulServiceInterfaceOperationsNC Service marker for stateful services which permits the closing of a particular service before the destruction of the session._ThumbnailStoreOperations Provides methods for dealing with thumbnails._ThumbnailStoreOperationsNC Provides methods for dealing with thumbnails.AMD_Exporter_addImage Adds a single image with basic metadata to the Exporter for inclusion on the next call to getBytes().AMD_Exporter_generateTiff Generates an OME-TIFF file.AMD_Exporter_generateXml Generates an OME-XML file.AMD_Exporter_read Returnslength
bytes from the output file.AMD_IAdmin_addGroupOwners Adds the given users to the owner list for this group.AMD_IAdmin_addGroups Adds a user to the given groups.AMD_IAdmin_canUpdate Returns true if the currently logged in user can modify the givenIObject
.AMD_IAdmin_changeExpiredCredentials Used after anExpiredCredentialException
instance is thrown.AMD_IAdmin_changeGroup Deprecated. changeGroup() is deprecated.AMD_IAdmin_changeOwner Deprecated. changeOwner() is deprecated.AMD_IAdmin_changePassword Changes the password for the current user.AMD_IAdmin_changePasswordWithOldPassword Changes the password for the current user by passing the old password.AMD_IAdmin_changePermissions Deprecated. changePermissions() is deprecated.AMD_IAdmin_changeUserPassword Changes the password for the a given user.AMD_IAdmin_containedExperimenters Fetches allExperimenter
users contained in this group.AMD_IAdmin_containedGroups Fetches allExperimenterGroup
groups of which the given user is a member.AMD_IAdmin_createExperimenter Creates and returns a new user in the given groups.AMD_IAdmin_createExperimenterWithPassword Creates and returns a new user in the given groups with password.AMD_IAdmin_createGroup Creates and returns a new group.AMD_IAdmin_createRestrictedSystemUser Creates and returns a new system user.AMD_IAdmin_createRestrictedSystemUserWithPassword Creates and returns a new system user.AMD_IAdmin_createSystemUser Creates and returns a new system user.AMD_IAdmin_createUser Creates and returns a new user.AMD_IAdmin_deleteExperimenter Removes a user by removing the password information for that user as well as allGroupExperimenterMap
instances.AMD_IAdmin_deleteGroup Removes a group by first removing all users in the group, and then deleting the actualExperimenterGroup
instance.AMD_IAdmin_getAdminPrivileges Gets the light administrator privileges for the given user.AMD_IAdmin_getAdminsWithPrivileges Gets the administrators who have all the given privileges.AMD_IAdmin_getCurrentAdminPrivileges Gets the light administrator privileges for the current user.AMD_IAdmin_getDefaultGroup Retrieves the defaultExperimenterGroup
group for the given user id.AMD_IAdmin_getEventContext Returns an implementation ofEventContext
loaded with the security for the current user and thread.AMD_IAdmin_getExperimenter Fetches anExperimenter
and all relatedExperimenterGroup
.AMD_IAdmin_getGroup Fetches anExperimenterGroup
and all containedExperimenter
users.AMD_IAdmin_getLeaderOfGroupIds Finds the ids for all groups for which the givenExperimenter
is owner/leader.AMD_IAdmin_getMemberOfGroupIds Finds the ids for all groups for which the givenExperimenter
is a member.AMD_IAdmin_getMyUserPhotos Retrieves theOriginalFile
object attached to this user as specified byuploadMyUserPhoto
.AMD_IAdmin_getSecurityRoles Returns the activeRoles
in use by the server.AMD_IAdmin_lookupExperimenter Looks up anExperimenter
and all relatedExperimenterGroup
by name.AMD_IAdmin_lookupExperimenters Looks up allExperimenter
experimenters present and all relatedExperimenterGroup
groups.AMD_IAdmin_lookupGroup Looks up anExperimenterGroup
and all containedExperimenter
users by name.AMD_IAdmin_lookupGroups Looks up allExperimenterGroup
groups present and all relatedExperimenter
experimenters.AMD_IAdmin_lookupLdapAuthExperimenter Looks upExperimenter
experimenters who use LDAP authentication (has set dn on password table).AMD_IAdmin_lookupLdapAuthExperimenters Looks up all ids ofExperimenter
experimenters who use LDAP authentication (has set dn on password table).AMD_IAdmin_moveToCommonSpace Moves the given objects into the user group to make them visible and linkable from all security contexts.AMD_IAdmin_removeGroupOwners removes the given users from the owner list for this group.AMD_IAdmin_removeGroups Removes an experimenter from the given groups.AMD_IAdmin_reportForgottenPassword Deprecated. reportForgottenPassword() is deprecated.AMD_IAdmin_setAdminPrivileges Sets the set of light administrator privileges for the given user.AMD_IAdmin_setDefaultGroup Sets the default group for a given user.AMD_IAdmin_setGroupOwner Adds the user to the owner list for this group.AMD_IAdmin_synchronizeLoginCache Uses JMX to refresh the login cache if supported.AMD_IAdmin_unsetGroupOwner Removes the user from the owner list for this group.AMD_IAdmin_updateExperimenter Updates an experimenter if admin or owner of group.AMD_IAdmin_updateExperimenterWithPassword Updates an experimenter if admin or owner of group.AMD_IAdmin_updateGroup Updates an experimenter group if admin or owner of group.AMD_IAdmin_updateSelf Allows a user to update his/her own information.AMD_IAdmin_uploadMyUserPhoto Uploads a photo for the user which will be displayed on his/her profile.AMD_IConfig_getClientConfigDefaults Reads the etc/omero.properties file and returns all the key/value pairs that are found there which match the prefix omero.client.AMD_IConfig_getClientConfigValues Retrieves configuration values likegetConfigValues
but only those with the prefix omero.client.AMD_IConfig_getConfigDefaults Reads the etc/omero.properties file and returns all the key/value pairs that are found there.AMD_IConfig_getConfigValue Retrieves a configuration value from the backend store.AMD_IConfig_getConfigValues Retrieves configuration values from the backend store which match the given regex.AMD_IConfig_getDatabaseTime Checks the database for its time using a SELECT statement.AMD_IConfig_getDatabaseUuid Provides the UUID for this OMERO (database) instance.AMD_IConfig_getServerTime Checks the current server for its time.AMD_IConfig_getVersion Provides the release version.AMD_IConfig_setConfigValue Sets a configuration value in the backend store.AMD_IConfig_setConfigValueIfEquals CallssetConfigValue
if and only if the configuration property is currently equal to the test argument.AMD_IContainer_createDataObject Creates the specified data object.AMD_IContainer_createDataObjects Convenience method to save network calls.AMD_IContainer_findContainerHierarchies Retrieves hierarchy trees in various hierarchies that contain the specified Images.AMD_IContainer_getCollectionCount Counts the number of members in a collection for a given object.AMD_IContainer_getImages Retrieve a user's (or all users') images within any given container.AMD_IContainer_getImagesByOptions Retrieves images by options.AMD_IContainer_getImagesBySplitFilesets Given a list of IDs of certain entity types, calculates which filesets are split such that a non-empty proper subset of their images are referenced, directly or indirectly, as being included.AMD_IContainer_getUserImages Retrieves a user's images.AMD_IContainer_link Convenience method for creating links.AMD_IContainer_loadContainerHierarchy Retrieves hierarchy trees rooted by a given node (unless orphan is specified -- See below)AMD_IContainer_retrieveCollection Retrieves a collection with all members initialized (loaded).AMD_IContainer_unlink Removes links between OmeroDataObjects e.g Project-Dataset, Dataset-Image Note that the objects themselves aren't deleted, only the Link objects.AMD_IContainer_updateDataObject Updates a data object.AMD_IContainer_updateDataObjects Convenience method to save network calls.AMD_ILdap_createUser Creates anExperimenter
entry in the OMERO DB based on the supplied LDAP username.AMD_ILdap_discover Discovers and listsExperimenter
s who are present in the remote LDAP server and in the local DB but have theldap
property set tofalse
.AMD_ILdap_discoverGroups Discovers and listsExperimenterGroup
s which are present in the remote LDAP server and in the local DB but have theldap
property set tofalse
.AMD_ILdap_findDN Searches unique Distinguished Name - string in LDAP for Common Name equals username.AMD_ILdap_findExperimenter Searches Experimenter by unique Distinguished Name - string in LDAP for Common Name equals username.AMD_ILdap_findGroup Looks up a specificExperimenterGroup
in LDAP using the provided group name.AMD_ILdap_findGroupDN Looks up the DN for a group.AMD_ILdap_getSetting Gets config value from properties.AMD_ILdap_searchAll Searches allExperimenter
list on LDAP for attribute objectClass = person.AMD_ILdap_searchByAttribute Searches allExperimenter
in LDAP for specified attribute.AMD_ILdap_searchByAttributes Searches allExperimenter
in LDAP for specified attributes.AMD_ILdap_searchByDN Searches oneExperimenter
in LDAP for specified Distinguished Name.AMD_ILdap_searchDnInGroups Searches Distinguished Name in groups.AMD_ILdap_setDN Deprecated. setDN() is deprecated.AMD_IMetadata_countAnnotationsUsedNotOwned Counts the number of annotation of a given type used by the specified user but not owned by the user.AMD_IMetadata_countSpecifiedAnnotations Counts the number of annotation of a given type.AMD_IMetadata_getTaggedObjectsCount Returns a map whose key is a tag id and the value the number of Projects, Datasets, and Images linked to that tag.AMD_IMetadata_loadAnnotation Loads the specified annotations.AMD_IMetadata_loadAnnotations Loads all the annotations of given types, that have been attached to the specifiedrootNodes
for the specifiedannotatorIds
.AMD_IMetadata_loadAnnotationsUsedNotOwned Loads the annotations of a given type used by the specified user but not owned by the user.AMD_IMetadata_loadChannelAcquisitionData Loads the logical channels and the acquisition metadata related to them.AMD_IMetadata_loadInstrument Loads the instrument and its components i.e.AMD_IMetadata_loadLogFiles Finds the original file IDs for the import logs corresponding to the given Image or Fileset IDs.AMD_IMetadata_loadSpecifiedAnnotations Loads all the annotations of a given type.AMD_IMetadata_loadSpecifiedAnnotationsLinkedTo Loads the annotations of a given type linked to the specified objects.AMD_IMetadata_loadTagContent Loads the TagSet if the id is specified otherwise loads all the TagSet.AMD_IMetadata_loadTagSets Loads all the TagSets.AMD_IPixels_copyAndResizeImage Copies the metadata, and only the metadata linked to a Image object into a new Image object of equal or differing size across one or many of its three physical dimensions or temporal dimension.AMD_IPixels_copyAndResizePixels Copies the metadata, and only the metadata linked to a Pixels object into a new Pixels object of equal or differing size across one or many of its three physical dimensions or temporal dimension.AMD_IPixels_createImage Creates the metadata, and only the metadata linked to an Image object.AMD_IPixels_getAllEnumerations Deprecated. Use ITypes#allEnumerations(string) instead.AMD_IPixels_getBitDepth Bit depth for a given pixel type.AMD_IPixels_getEnumeration Deprecated. Use ITypes#getEnumeration(string, string) instead.AMD_IPixels_loadRndSettings Loads a specific set of rendering settings.AMD_IPixels_retrieveAllRndSettings Retrieves all the rendering settings for a given pixels set and the passed user.AMD_IPixels_retrievePixDescription Retrieves the pixels metadata.AMD_IPixels_retrieveRndSettings Retrieves the rendering settings for a given pixels set and the currently logged in user.AMD_IPixels_retrieveRndSettingsFor Retrieves the rendering settings for a given pixels set and the passed user.AMD_IPixels_saveRndSettings Saves the specified rendering settings.AMD_IPixels_setChannelGlobalMinMax Sets the channel global (all 2D optical sections corresponding to a particular channel) minimum and maximum for a Pixels set.AMD_IProjection_projectPixels Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.AMD_IProjection_projectStack Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.AMD_IQuery_find Looks up an entity by class and id.AMD_IQuery_findAll Looks up all entities that belong to this class and match filter.AMD_IQuery_findAllByExample Searches based on provided example entity.AMD_IQuery_findAllByFullText Executes a full text search based on Lucene.AMD_IQuery_findAllByQuery Executes the stored query with the given name.AMD_IQuery_findAllByString Searches a given field matching against a String.AMD_IQuery_findByExample Searches based on provided example entity.AMD_IQuery_findByQuery Executes the stored query with the given name.AMD_IQuery_findByString Searches a given field matching against a String.AMD_IQuery_get Looks up an entity by class and id.AMD_IQuery_projection Return a sequence ofRType
sequences.AMD_IQuery_refresh Refreshes an entireIObject
graph, recursive loading all data for the managed instances in the graph from the database.AMD_IRenderingSettings_applySettingsToDataset Applies rendering settings to all images in a given Dataset.AMD_IRenderingSettings_applySettingsToImage Applies rendering settings to a given Image.AMD_IRenderingSettings_applySettingsToImages Applies rendering settings to a given Image.AMD_IRenderingSettings_applySettingsToPixels Applies rendering settings to a given Pixels.AMD_IRenderingSettings_applySettingsToProject Applies rendering settings to all images in all Datasets of a given Project.AMD_IRenderingSettings_applySettingsToSet Applies rendering settings to one or many containers.AMD_IRenderingSettings_createNewRenderingDef Creates a new rendering definition object along with its sub-objects.AMD_IRenderingSettings_getRenderingSettings Returns the default rendering settings for a given pixels for the current user.AMD_IRenderingSettings_resetDefaults Resets the given rendering settings to those that are specified by the rendering engine intelligent pretty good image (PG) logic for the pixels set linked to that set of rendering settings.AMD_IRenderingSettings_resetDefaultsByOwnerInSet Resets the rendering settings of a given group of containers based on the owner's (essentially a copy).AMD_IRenderingSettings_resetDefaultsForPixels Resets a Pixels' default rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.AMD_IRenderingSettings_resetDefaultsInDataset Resets a dataset's rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.AMD_IRenderingSettings_resetDefaultsInImage Resets an image's default rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.AMD_IRenderingSettings_resetDefaultsInSet Resets a rendering settings back to one or many containers that are specified by the rendering engine intelligent pretty good image (PG) logic.AMD_IRenderingSettings_resetDefaultsNoSave Resets the given rendering settings to those that are specified by the rendering engine intelligent pretty good image (PG) logic for the pixels set linked to that set of rendering settings.AMD_IRenderingSettings_resetMinMaxInSet Resets a the channel windows for one or many containers back to their global minimum and global maximum for the channel.AMD_IRenderingSettings_sanityCheckPixels Checks if the specified sets of pixels are compatible.AMD_IRenderingSettings_setOriginalSettingsForPixels Resets an Pixels' default rendering settings back to channel global minimum and maximum.AMD_IRenderingSettings_setOriginalSettingsInDataset Resets a dataset's rendering settings back to channel global minimum and maximum.AMD_IRenderingSettings_setOriginalSettingsInImage Resets an image's default rendering settings back to channel global minimum and maximum.AMD_IRenderingSettings_setOriginalSettingsInSet Resets a rendering settings back to channel global minimum and maximum for the specified containers.AMD_IRepositoryInfo_getFreeSpaceInKilobytes Returns the free or available space on this file system including nested subdirectories.AMD_IRepositoryInfo_getUsageFraction Returns a double of the used space divided by the free space.AMD_IRepositoryInfo_getUsedSpaceInKilobytes Returns the total space in bytes for this file system including nested subdirectories.AMD_IRepositoryInfo_removeUnusedFiles Removes all files from the server that do not have an OriginalFile complement in the database, all the Pixels that do not have a complement in the database and all the Thumbnail's that do not have a complement in the database.AMD_IRepositoryInfo_sanityCheckRepository Checks that image data repository has not exceeded 95% disk space use level.AMD_IRoi_findByImage Deprecated. IROI is deprecated.AMD_IRoi_findByPlane Deprecated. IROI is deprecated.AMD_IRoi_findByRoi Deprecated. IROI is deprecated.AMD_IRoi_getMeasuredRois Deprecated. IROI is deprecated.AMD_IRoi_getMeasuredRoisMap Deprecated. IROI is deprecated.AMD_IRoi_getPoints Deprecated. IROI is deprecated.AMD_IRoi_getRoiMeasurements Deprecated. IROI is deprecated.AMD_IRoi_getRoiStats Deprecated. IROI is deprecated.AMD_IRoi_getShapeStats Deprecated. IROI is deprecated.AMD_IRoi_getShapeStatsList Deprecated. IROI is deprecated.AMD_IRoi_getShapeStatsRestricted Deprecated. IROI is deprecated.AMD_IRoi_getTable Deprecated. IROI is deprecated.AMD_IRoi_uploadMask Deprecated. IROI is deprecated.AMD_IScript_canRunScript Returns true if there is a processor which will run the given script.AMD_IScript_deleteScript Delete the script on the server with id.AMD_IScript_editScript Modify the text for the given script object.AMD_IScript_getParams Get the parameters that the script takes and returns, along with other metadata available from the script.AMD_IScript_getScriptID Get the id of an official script by the script path.AMD_IScript_getScripts This method returns official server scripts as a list ofOriginalFile
objects.AMD_IScript_getScriptsByMimetype This method returns official server scripts identified with the specified extension as a list ofOriginalFile
objects.AMD_IScript_getScriptText Get the text from the server for the script with given id.AMD_IScript_getScriptWithDetails Get the script from the server with details from OriginalFileAMD_IScript_getUserScripts Returns non-official scripts which have been uploaded by individual users.AMD_IScript_runScript IfResourceError
is thrown, then noProcessor
is available.AMD_IScript_uploadOfficialScript LikeuploadScript
but is only callable by administrators.AMD_IScript_uploadScript Upload a user script to the server and return the id.AMD_IScript_validateScript Used internally by processor.py to check if the script attached to theJob
has a valid script attached, based on theacceptsList
and the current security context.AMD_ISession_closeSession Closes session and releases all resources.AMD_ISession_createSession Creates a new session and returns it to the user.AMD_ISession_createSessionWithTimeout Allows an admin to create aSession
for the givePrincipal
.AMD_ISession_createSessionWithTimeouts Allows an admin to create aSession
for the givenPrincipal
.AMD_ISession_createUserSession Allows a user to open up another session for him/herself with the given defaults without needing to re-enter password.AMD_ISession_getInput Retrieves an entry from the givenSession
input environment.AMD_ISession_getInputKeys Retrieves all keys in theSession
input environment.AMD_ISession_getInputs Retrieves all inputs from the givenSession
input environment.AMD_ISession_getMyOpenAgentSessions LikegetMyOpenSessions
but returns only those sessions with the given agent string.AMD_ISession_getMyOpenClientSessions LikegetMyOpenSessions
but returns only those sessions started by official OMERO clients.AMD_ISession_getMyOpenSessions Returns a list of open sessions for the current user.AMD_ISession_getOutput Retrieves an entry from theSession
output environment.AMD_ISession_getOutputKeys Retrieves all keys in theSession
output environment.AMD_ISession_getOutputs Retrieves all outputs from the givenSession
input environment.AMD_ISession_getReferenceCount Retrieves the current reference count for the given uuid.AMD_ISession_getSession Retrieves the session associated with this uuid, updating the last access time as well.AMD_ISession_setInput Places an entry in the givenSession
input environment.AMD_ISession_setOutput Places an entry in the givenSession
output environment.AMD_IShare_activate Turns on the access control lists attached to the given share for the current session.AMD_IShare_addComment CreatesTextAnnotation
comment forSession
share.AMD_IShare_addGuest Adds guest email address to the share.AMD_IShare_addGuests Adds guest email addresses to the share.AMD_IShare_addObject AMD_IShare_addObjects AMD_IShare_addReply CreatesTextAnnotation
comment which replies to an existing comment.AMD_IShare_addUser AddsExperimenter
experimenter toSession
share.AMD_IShare_addUsers AddsExperimenter
experimenters toSession
share.AMD_IShare_closeShare ClosesSession
share.AMD_IShare_createShare AMD_IShare_deactivate Turns off the access control lists with the current share.AMD_IShare_deleteComment DeletesAnnotation
comment from the database.AMD_IShare_getActiveConnections Gets actual active connections toSession
share.AMD_IShare_getAllGuests Get the email addresses for all share guests.AMD_IShare_getAllMembers Get allExperimenter
users who are a member of the share.AMD_IShare_getAllUsers Get a single set containing theomero.model.Experimenter.getOmeName
login names of the users as well email addresses for guests.AMD_IShare_getCommentCount Returns a map from share id to comment count.AMD_IShare_getComments Looks up allAnnotation
comments which belong to theSession
share.AMD_IShare_getContentMap Returns the contents of the share keyed by type.AMD_IShare_getContents AMD_IShare_getContentSize Returns the number of items in the share.AMD_IShare_getContentSubList Returns a range of items from the share.AMD_IShare_getEvents Gets events forSession
share perExperimenter
experimenter for period of time.AMD_IShare_getMemberCount Returns a map from share id to the count of total members (including the owner).AMD_IShare_getMemberShares Gets all shares where currentExperimenter
is a member.AMD_IShare_getMemberSharesFor Gets all shares where givenExperimenter
is a member.AMD_IShare_getOwnShares Gets all owned shares for the currentExperimenter
.AMD_IShare_getPastConnections Gets previous connections toSession
share.AMD_IShare_getShare Gets a share as aSession
with all related:Annotation
comments,Experimenter
members, fully loaded.AMD_IShare_getSharesOwnedBy Gets all shares owned by the givenExperimenter
.AMD_IShare_invalidateConnection Makes the connection invalid forSession
share for specified user.AMD_IShare_notifyMembersOfShare Notifies via email selected members of share.AMD_IShare_removeGuest Removes guest email address from share.AMD_IShare_removeGuests Removes guest email addresses from the share.AMD_IShare_removeObject AMD_IShare_removeObjects Remove existing items from the share.AMD_IShare_removeUser RemovesExperimenter
experimenter fromSession
share.AMD_IShare_removeUsers RemovesExperimenter
experimenters fromSession
share.AMD_IShare_setActive AMD_IShare_setDescription AMD_IShare_setExpiration AMD_ITimeline_countByPeriod Queries the same information as getByPeriod, but only returns the counts for the given objects.AMD_ITimeline_getByPeriod Returns the given LIMIT objects of TYPES as ordered by creation/modification times in the Event table, but within the given time window.AMD_ITimeline_getEventLogsByPeriod Returns the EventLog table objects which are queried to produce the counts above.AMD_ITimeline_getMostRecentAnnotationLinks Return the last LIMIT annotation __Links__ whose parent (IAnnotated) matches one of the parentTypes, whose child (Annotation) matches one of the childTypes (limit of one for the moment), and who namespace matches via ILIKE.AMD_ITimeline_getMostRecentObjects Returns the last LIMIT objects of TYPES as ordered by creation/modification times in the Event table.AMD_ITimeline_getMostRecentShareCommentLinks Return the last LIMIT comment annotation links attached to a share by __others__.AMD_ITypes_allEnumerations AMD_ITypes_createEnumeration AMD_ITypes_deleteEnumeration Deletes enumeration value specified by object.AMD_ITypes_getAnnotationTypes Returns a list of classes which implementIAnnotated
.AMD_ITypes_getEnumeration Lookup an enumeration value.AMD_ITypes_getEnumerationsWithEntries Gets all metadata classes which are IEnum type with contained objects.AMD_ITypes_getEnumerationTypes Gets all metadata classes which are IEnum type.AMD_ITypes_getOriginalEnumerations Gets all original values.AMD_ITypes_resetEnumerations AMD_ITypes_updateEnumeration Updates enumeration value specified by object.AMD_ITypes_updateEnumerations Updates enumeration value specified by object.AMD_IUpdate_deleteObject Deprecated. use omero::cmd::Delete2 insteadAMD_IUpdate_indexObject Initiates full-text indexing for the given object.AMD_IUpdate_saveAndReturnArray AMD_IUpdate_saveAndReturnIds AMD_IUpdate_saveAndReturnObject AMD_IUpdate_saveArray AMD_IUpdate_saveCollection AMD_IUpdate_saveObject AMD_JobHandle_attach Returns the currentJobStatus
for the Job id.AMD_JobHandle_cancelJob Marks a job for cancellation.AMD_JobHandle_getJob Returns the currentJob
AMD_JobHandle_jobError Returnstrue
if theJob
has thrown an error.AMD_JobHandle_jobFinished AMD_JobHandle_jobMessage Returns the current message for job.AMD_JobHandle_jobRunning Returnstrue
if theJob
is running, i.e.AMD_JobHandle_jobStatus Returns the currentJobStatus
.AMD_JobHandle_setMessage Sets the job's message string, and returns the previous value.AMD_JobHandle_setStatus Updates theJobStatus
for the current job.AMD_JobHandle_setStatusAndMessage LikesetStatus
but also sets the message.AMD_JobHandle_submit Submits aJob
and returns its database id.AMD_MetadataStore_createRoot AMD_MetadataStore_populateMinMax AMD_MetadataStore_postProcess AMD_MetadataStore_saveToDB AMD_MetadataStore_setPixelsFile AMD_MetadataStore_updateObjects AMD_MetadataStore_updateReferences AMD_PyramidService_getResolutionDescriptions Retrieves a more complete definition of the resolution level in question.AMD_PyramidService_getResolutionLevel Retrieves the active resolution level.AMD_PyramidService_getResolutionLevels Retrieves the number of resolution levels that the backing pixels pyramid contains.AMD_PyramidService_getTileSize Retrieves the tile size for the pixel store.AMD_PyramidService_requiresPixelsPyramid Whether or not this raw pixels store requires a backing pixels pyramid to provide sub-resolutions of the data.AMD_PyramidService_setResolutionLevel Sets the active resolution level.AMD_RawFileStore_exists Checks to see if a raw file exists with the file ID that the service was initialized with.AMD_RawFileStore_getFileId Returns the current file id or null if none has been set.AMD_RawFileStore_read Readslength
bytes of data at theposition
from the raw file into an array of bytes.AMD_RawFileStore_save Saves theOriginalFile
associated with the service if it has been modified.AMD_RawFileStore_setFileId This method manages the state of the service.AMD_RawFileStore_size Returns the size of the file on disk (not as stored in the database since that value will only be updated onsave
.AMD_RawFileStore_truncate Limits the size of a file to the given length.AMD_RawFileStore_write Writeslength
bytes of data from the specifiedbuf
byte array starting at atposition
to the raw file.AMD_RawPixelsStore_calculateMessageDigest Calculates a SHA-1 message digest for the entire pixel store.AMD_RawPixelsStore_findMinMax Find the minimum and maximum pixel values for the specified channels by iterating over a full plane.AMD_RawPixelsStore_getByteWidth Returns the byte width for the pixel store.AMD_RawPixelsStore_getCol Retrieves a particular column from this pixel store.AMD_RawPixelsStore_getHistogram Retrieves the histogram data for the specified plane and channels.AMD_RawPixelsStore_getHypercube Retrieves a n-dimensional block from this pixel store.AMD_RawPixelsStore_getPixelsId Returns the current Pixels set identifier.AMD_RawPixelsStore_getPixelsPath Returns the current Pixels path.AMD_RawPixelsStore_getPlane Retrieves a particular 2D image plane from this pixel store.AMD_RawPixelsStore_getPlaneOffset Retrieves the offset for a particular 2D image plane in this pixel store.AMD_RawPixelsStore_getPlaneRegion Retrieves a region from a given plane from this pixel store.AMD_RawPixelsStore_getPlaneSize Retrieves the in memory size of a 2D image plane in this pixel store.AMD_RawPixelsStore_getRegion Retrieves a region from this pixel store.AMD_RawPixelsStore_getRow Retrieves a particular row or scanline from this pixel store.AMD_RawPixelsStore_getRowOffset Retrieves the offset for a particular row or scanline in this pixel store.AMD_RawPixelsStore_getRowSize Retrieves the in memory size of a row or scanline of pixels in this pixel store.AMD_RawPixelsStore_getStack Retrieves the the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.AMD_RawPixelsStore_getStackOffset Retrieves the offset for the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.AMD_RawPixelsStore_getStackSize Retrieves the in memory size of the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.AMD_RawPixelsStore_getTile Retrieves a tile from this pixel buffer.AMD_RawPixelsStore_getTimepoint Retrieves the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.AMD_RawPixelsStore_getTimepointOffset Retrieves the in memory size of the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.AMD_RawPixelsStore_getTimepointSize Retrieves the in memory size of the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.AMD_RawPixelsStore_getTotalSize Retrieves the in memory size of the entire pixel store.AMD_RawPixelsStore_isFloat Returns whether or not the pixel buffer has floating point pixels.AMD_RawPixelsStore_isSigned Returns whether or not the pixel store has signed pixels.AMD_RawPixelsStore_prepare Prepares the stateful service with a cache of loaded Pixels objects.AMD_RawPixelsStore_save Save the current state of the pixels, updating the SHA1.AMD_RawPixelsStore_setPixelsId Initializes the stateful service for a given Pixels set.AMD_RawPixelsStore_setPlane Sets a particular 2D image plane in this pixel store.AMD_RawPixelsStore_setRegion Sets a region in this pixel buffer.AMD_RawPixelsStore_setRow Sets a particular row or scanline in this pixel store.AMD_RawPixelsStore_setStack Sets the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.AMD_RawPixelsStore_setTile Sets a tile in this pixel buffer.AMD_RawPixelsStore_setTimepoint Sets the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.AMD_RenderingEngine_addCodomainMap Deprecated. addCodomainMap() is deprecated.AMD_RenderingEngine_addCodomainMapToChannel Adds the context to the mapping chain.AMD_RenderingEngine_getAvailableFamilies Returns the list of mapping families supported by the Rendering engine.AMD_RenderingEngine_getAvailableModels Returns the list of color models supported by the Rendering engine.AMD_RenderingEngine_getChannelCurveCoefficient Returns the coefficient identifying a map in the family.AMD_RenderingEngine_getChannelFamily Returns the family associated to the specified channel.AMD_RenderingEngine_getChannelLookupTable AMD_RenderingEngine_getChannelNoiseReduction Returnstrue
if the noise reduction algorithm used to map the pixels intensity values is turned on,false
if the algorithm is turned off.AMD_RenderingEngine_getChannelStats AMD_RenderingEngine_getChannelWindowEnd Returns the upper bound of the pixels intensity interval.AMD_RenderingEngine_getChannelWindowStart Returns the lower bound of the pixels intensity interval.AMD_RenderingEngine_getCodomainMapContext Returns the list of codomain contexts for the specified channel.AMD_RenderingEngine_getCompressionLevel Returns the current compression level for the service.AMD_RenderingEngine_getDefaultT Returns the default timepoint index.AMD_RenderingEngine_getDefaultZ Returns the index of the default focal section.AMD_RenderingEngine_getModel Returns the model that dictates how transformed raw data has to be mapped onto a color space.AMD_RenderingEngine_getPixels Returns thePixels
set the Rendering engine is for.AMD_RenderingEngine_getPixelsTypeLowerBound Returns the maximum value for that channels depending on the pixels type and the original range (globalmin, globalmax)AMD_RenderingEngine_getPixelsTypeUpperBound Returns the minimum value for that channels depending on the pixels type and the original range (globalmin, globalmax)AMD_RenderingEngine_getQuantumDef Returns the quantization object.AMD_RenderingEngine_getRenderingDefId AMD_RenderingEngine_getRGBA Returns a 4D-array representing the color associated to the specified channel.AMD_RenderingEngine_isActive Returnstrue
if the channel is mapped,false
otherwise.AMD_RenderingEngine_isPixelsTypeSigned Returnstrue
if the pixels type is signed,false
otherwise.AMD_RenderingEngine_load Creates an instance of the rendering engine.AMD_RenderingEngine_loadRenderingDef Loads a specific set of rendering settings that does not necessarily have to be linked to the given Pixels set.AMD_RenderingEngine_lookupPixels Loads the Pixels set this Rendering Engine is for.AMD_RenderingEngine_lookupRenderingDef Loads the rendering settings associated to the specified pixels set.AMD_RenderingEngine_removeCodomainMap Deprecated. removeCodomainMap() is deprecated.AMD_RenderingEngine_removeCodomainMapFromChannel Removes the specified context from the chain.AMD_RenderingEngine_render Renders the data selected bydef
according to the current rendering settings.AMD_RenderingEngine_renderAsPackedInt Renders the data selected bydef
according to the current rendering settings.AMD_RenderingEngine_renderCompressed Renders the data selected bydef
according to the current rendering settings and compresses the resulting RGBA composite image.AMD_RenderingEngine_renderProjectedAsPackedInt Performs a projection through selected optical sections of a particular timepoint with the currently active channels and renders the data for display.AMD_RenderingEngine_renderProjectedCompressed Performs a projection through selected optical sections of a particular timepoint with the currently active channels, renders the data for display and compresses the resulting RGBA composite image.AMD_RenderingEngine_resetDefaultSettings Resets the default settings i.e.AMD_RenderingEngine_saveAsNewSettings Saves the current rendering settings in the database as a newRenderingDef
and loads the object into the currentRenderingEngine
.AMD_RenderingEngine_saveCurrentSettings Saves the current rendering settings in the database.AMD_RenderingEngine_setActive Maps the specified channel iftrue
, unmaps the channel otherwise.AMD_RenderingEngine_setChannelLookupTable AMD_RenderingEngine_setChannelWindow Returns the pixels intensity interval.AMD_RenderingEngine_setCodomainInterval Sets the sub-interval of the device space i.e.AMD_RenderingEngine_setCompressionLevel Sets the current compression level for the service.AMD_RenderingEngine_setDefaultT Sets the default timepoint index.AMD_RenderingEngine_setDefaultZ Sets the index of the default focal section.AMD_RenderingEngine_setModel Specifies the model that dictates how transformed raw data has to be mapped onto a color space.AMD_RenderingEngine_setOverlays Deprecated. use omero::romio::PlaneDefWithMasks insteadAMD_RenderingEngine_setQuantizationMap Sets the quantization map, one per channel.AMD_RenderingEngine_setQuantumStrategy Sets the quantization strategy.AMD_RenderingEngine_setRGBA Sets the four components composing the color associated to the specified channel.AMD_RenderingEngine_updateCodomainMap Deprecated. removeCodomainMap() is deprecated.AMD_RenderingEngine_updateSettings Updates the current rendering settings based on a provided rendering definition and associated sub-objects.AMD_Search_activeQueries Returns the number of active queries.AMD_Search_addOrderByAsc A path from the target entity which will be added to the current stack of order statements applied to the query.AMD_Search_addOrderByDesc A path from the target entity which will be added to the current stack of order statements applied to the query.AMD_Search_allTypes Permits all types to be returned.AMD_Search_and Applies the next by* method to the previous by* method, so that a callhasNext
,next
, orresults
sees only the intersection of the two calls.AMD_Search_byAnnotatedWith Finds entities annotated with anAnnotation
similar to the example.AMD_Search_byFullText Passes the query as is to the Lucene backend.AMD_Search_byGroupForTags Returns transient (without ID)TagAnnotation
instances which represent all theTagAnnotation
tags in the given group.AMD_Search_byHqlQuery Delegates toomero.api.IQuery.findAllByQuery
method to take advantage of theand
,or
, andnot
methods, or queue-semantics.AMD_Search_byLuceneQueryBuilder Builds a Lucene query and passes it to the Lucene backend.AMD_Search_bySimilarTerms Returns transient (without ID)TextAnnotation
instances which represent terms which are similar to the given terms.AMD_Search_bySomeMustNone Builds a Lucene query and passes it tobyFullText
.AMD_Search_byTagForGroups Creates a query which will return transient (without ID)TagAnnotation
instances which represent all theTagAnnotation
tag groups which the given tag belongs to.AMD_Search_clearQueries Removes all active queries (leavingresetDefaults
settings alone), such thatactiveQueries
will return 0.AMD_Search_currentMetadata Provides access to the extra query information (for example Lucene score and boost values) for a single call tonext
.AMD_Search_currentMetadataList Provides access to the extra query information (for example Lucene score and boost values) for a single call toresults
.AMD_Search_fetchAlso Adds a fetch clause for loading non-annotation fields of returned entities.AMD_Search_fetchAnnotations Queries the database for allAnnotation
annotations of the given types for all returned instances.AMD_Search_getBatchSize Returns the current batch size.AMD_Search_hasNext Returnstrue
if another call tonext
is valid.AMD_Search_isAllowLeadingWildcard Returns the current leading-wildcard setting.AMD_Search_isCaseSensitive Returns the current case sensitivity setting.AMD_Search_isMergedBatches Returns the current merged-batches setting.AMD_Search_isReturnUnloaded Returns the current return-unloaded setting.AMD_Search_isUseProjections Returns the current use-projection setting.AMD_Search_next Returns the next entity from the current query.AMD_Search_not Applies the next by* method to the previous by* method, so that a callhasNext
,next
, orresults
sees only the intersection of the two calls.AMD_Search_notAnnotatedBy Restricts entities by who has not annotated them with anAnnotation
matching the other filters.AMD_Search_notOwnedBy Uses theDetails.getOwner()
andDetails.getGroup()
information to restrict the entities which will be returned.AMD_Search_onlyAnnotatedBetween Restricts entities by the time in which any annotation (which matches the other filters) was added them.AMD_Search_onlyAnnotatedBy Restricts entities by who has annotated them with anAnnotation
matching the other filters.AMD_Search_onlyAnnotatedWith Restricts entities to having anAnnotation
of all the given types.AMD_Search_onlyCreatedBetween Restricts the time between which an entity may have been created.AMD_Search_onlyIds Restricts the set of ids which will be checked.AMD_Search_onlyModifiedBetween Restricts the time between which an entity may have last been modified.AMD_Search_onlyOwnedBy Uses theDetails.getOwner()
andDetails.getGroup()
information to restrict the entities which will be returned.AMD_Search_onlyType Restricts the search to a single type.AMD_Search_onlyTypes Restricts searches to a set of types.AMD_Search_or Applies the next by* method to the previous by* method, so that a callhasNext
,next
orresults
sees only the union of the two calls.AMD_Search_remove Unsupported operation.AMD_Search_resetDefaults Resets all settings (non-query state) to the original default values, as if the instance had just be created.AMD_Search_results Returns up togetBatchSize
batch size number of results along with the related query metadata.AMD_Search_setAllowLeadingWildcard Permits full-text queries with a leading query if true.AMD_Search_setBatchSize Sets the maximum number of results that will be returned by one call toresults
.AMD_Search_setCaseSensitive Sets the case sensitivity on all queries where case-sensitivity is supported.AMD_Search_setCaseSentivice Deprecated. use setCaseSensitive insteadAMD_Search_setMergedBatches Set whether or not results from two separate queries can be returned in the same call toresults
.AMD_Search_setReturnUnloaded Determines if all results should be returned as unloaded objects.AMD_Search_setUseProjections Determines if Lucene queries should not hit the database.AMD_Search_unordered Removes the current stack of order statements.AMD_StatefulServiceInterface_activate Load a service implementation from disk if it was previously passivated.AMD_StatefulServiceInterface_close Frees all resources -- passivated or active -- for the given stateful service and removes its name from the object adapter.AMD_StatefulServiceInterface_getCurrentEventContext To free clients from tracking the mapping from session to stateful service, each stateful service can returns its own context information.AMD_StatefulServiceInterface_passivate Causes the blitz server to store the service implementation to disk to free memory.AMD_ThumbnailStore_createThumbnail Creates a thumbnail for a pixels set using a given set of rendering settings (RenderingDef) in the on-disk cache.AMD_ThumbnailStore_createThumbnails Creates thumbnails for a pixels set using a given set of rendering settings (RenderingDef) in the on-disk cache for every sizeX/sizeY combination already cached.AMD_ThumbnailStore_createThumbnailsByLongestSideSet Creates thumbnails for a number of pixels sets using a given set of rendering settings (RenderingDef) in the on-disk cache.AMD_ThumbnailStore_getRenderingDefId Return the id of theRenderingDef
loaded in this instance.AMD_ThumbnailStore_getThumbnail Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).AMD_ThumbnailStore_getThumbnailByLongestSide Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).AMD_ThumbnailStore_getThumbnailByLongestSideDirect Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).AMD_ThumbnailStore_getThumbnailByLongestSideSet Retrieves a number of thumbnails for pixels sets using given sets of rendering settings (RenderingDef).AMD_ThumbnailStore_getThumbnailDirect Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).AMD_ThumbnailStore_getThumbnailForSectionByLongestSideDirect Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef) for a particular section.AMD_ThumbnailStore_getThumbnailForSectionDirect Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef) for a particular section.AMD_ThumbnailStore_getThumbnailSet Retrieves a number of thumbnails for pixels sets using given sets of rendering settings (RenderingDef).AMD_ThumbnailStore_getThumbnailWithoutDefault Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).AMD_ThumbnailStore_isInProgress This returns the last available in progress state for a thumbnail.AMD_ThumbnailStore_resetDefaults Resets the rendering definition for the active pixels set to its default settings.AMD_ThumbnailStore_setPixelsId This method manages the state of the service; it must be invoked before using any other methods.AMD_ThumbnailStore_setRenderingDefId This method manages the state of the service; it should be invoked directly aftersetPixelsId
.AMD_ThumbnailStore_thumbnailExists Checks if a thumbnail of a particular size exists for a pixels set.ClientCallback Primary callback interface for interaction between client and server session (""ServiceFactory"").ClientCallbackPrx Primary callback interface for interaction between client and server session (""ServiceFactory"").Exporter Stateful service for generating OME-XML or OME-TIFF from data stored in OMERO.ExporterPrx Stateful service for generating OME-XML or OME-TIFF from data stored in OMERO.IAdmin Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions.IAdminPrx Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions.IConfig Access to server configuration.IConfigPrx Access to server configuration.IContainer Provides methods for dealing with the core Pojos of OME.IContainerPrx Provides methods for dealing with the core Pojos of OME.ILdap Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions.ILdapPrx Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions.IMetadata Provides method to interact with acquisition metadata and annotations.IMetadataPrx Provides method to interact with acquisition metadata and annotations.IPixels Metadata gateway for theRenderingEngine
and clients.IPixelsPrx Metadata gateway for theRenderingEngine
and clients.IProjection Provides methods for performing projections of Pixels sets.IProjectionPrx Provides methods for performing projections of Pixels sets.IQuery Provides methods for directly querying object graphs.IQueryPrx Provides methods for directly querying object graphs.IRenderingSettings Provides method to apply rendering settings to a collection of images.IRenderingSettingsPrx Provides method to apply rendering settings to a collection of images.IRepositoryInfo Provides methods for obtaining information for server repository disk space allocation.IRepositoryInfoPrx Provides methods for obtaining information for server repository disk space allocation.IRoi Interface for working with regions of interest.IRoiPrx Interface for working with regions of interest.IScript Utility service for managing and launching scripts for execution by the Processor API.IScriptPrx Utility service for managing and launching scripts for execution by the Processor API.ISession Session
creation service for OMERO.ISessionPrx Session
creation service for OMERO.IShare Provides method for sharing - collaboration process for images, datasets, projects.ISharePrx Provides method for sharing - collaboration process for images, datasets, projects.ITimeline Service for the querying of OMERO metadata based on creation and modification time.ITimelinePrx Service for the querying of OMERO metadata based on creation and modification time.ITypes Access to reflective type information.ITypesPrx Access to reflective type information.IUpdate Provides methods for directly updating object graphs.IUpdatePrx Provides methods for directly updating object graphs.JobHandle Allows submission of asynchronous jobs.JobHandlePrx Allows submission of asynchronous jobs.MetadataStore Server-side interface for import.MetadataStorePrx Server-side interface for import.PyramidService PyramidServicePrx RawFileStore Raw file gateway which provides access to the OMERO file repository.RawFileStorePrx Raw file gateway which provides access to the OMERO file repository.RawPixelsStore Binary data provider.RawPixelsStorePrx Binary data provider.RenderingEngine Defines a service to render a given pixels set.RenderingEnginePrx Defines a service to render a given pixels set.ResolutionDescriptionPrx RoiOptionsPrx Specifies filters used when querying the ROIs.RoiResultPrx Returned by most search methods.RoiStatsPrx Container for ShapeStats, one with the combined values, and one per shape.SavePrx SaveRspPrx Search Central search interface, allowing Web2.0 style queries.SearchPrx Central search interface, allowing Web2.0 style queries.ServiceFactory Starting point for all OMERO.blitz interaction.ServiceFactoryPrx Starting point for all OMERO.blitz interaction.ServiceInterface Service marker similar to ome.api.ServiceInterface.ServiceInterfacePrx Service marker similar to ome.api.ServiceInterface.ShapePointsPrx Contains a discrete representation of the geometry of an omero::model::Shape.ShapeStatsPrx Contains arrays, one entry per channel, of the statistics for a given shape.StatefulServiceInterface Service marker for stateful services which permits the closing of a particular service before the destruction of the session.StatefulServiceInterfacePrx Service marker for stateful services which permits the closing of a particular service before the destruction of the session.ThumbnailStore Provides methods for dealing with thumbnails.ThumbnailStorePrx Provides methods for dealing with thumbnails. -
Class Summary Class Description _ClientCallbackDisp Primary callback interface for interaction between client and server session (""ServiceFactory"")._ClientCallbackTie _ExporterDisp Stateful service for generating OME-XML or OME-TIFF from data stored in OMERO._ExporterTie _IAdminDisp Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions._IAdminTie _IConfigDisp Access to server configuration._IConfigTie _IContainerDisp Provides methods for dealing with the core Pojos of OME._IContainerTie _ILdapDisp Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions._ILdapTie _IMetadataDisp Provides method to interact with acquisition metadata and annotations._IMetadataTie _IPixelsDisp Metadata gateway for theRenderingEngine
and clients._IPixelsTie _IProjectionDisp Provides methods for performing projections of Pixels sets._IProjectionTie _IQueryDisp Provides methods for directly querying object graphs._IQueryTie _IRenderingSettingsDisp Provides method to apply rendering settings to a collection of images._IRenderingSettingsTie _IRepositoryInfoDisp Provides methods for obtaining information for server repository disk space allocation._IRepositoryInfoTie _IRoiDisp Interface for working with regions of interest._IRoiTie _IScriptDisp Utility service for managing and launching scripts for execution by the Processor API._IScriptTie _ISessionDisp Session
creation service for OMERO._ISessionTie _IShareDisp Provides method for sharing - collaboration process for images, datasets, projects._IShareTie _ITimelineDisp Service for the querying of OMERO metadata based on creation and modification time._ITimelineTie _ITypesDisp Access to reflective type information._ITypesTie _IUpdateDisp Provides methods for directly updating object graphs._IUpdateTie _JobHandleDisp Allows submission of asynchronous jobs._JobHandleTie _MetadataStoreDisp Server-side interface for import._MetadataStoreTie _PyramidServiceDisp _PyramidServiceTie _RawFileStoreDisp Raw file gateway which provides access to the OMERO file repository._RawFileStoreTie _RawPixelsStoreDisp Binary data provider._RawPixelsStoreTie _RenderingEngineDisp Defines a service to render a given pixels set._RenderingEngineTie _SearchDisp Central search interface, allowing Web2.0 style queries._SearchTie _ServiceFactoryDisp Starting point for all OMERO.blitz interaction._ServiceFactoryTie _ServiceInterfaceDisp Service marker similar to ome.api.ServiceInterface._ServiceInterfaceTie _StatefulServiceInterfaceDisp Service marker for stateful services which permits the closing of a particular service before the destruction of the session._StatefulServiceInterfaceTie _ThumbnailStoreDisp Provides methods for dealing with thumbnails._ThumbnailStoreTie AdminPrivilegeListHelper AdminPrivilegeListHolder AnnotationListHelper AnnotationListHolder BoolArrayHelper BoolArrayHolder BooleanIdListMapHelper BooleanIdListMapHolder BooleanLongListMapHelper BooleanLongListMapHolder ByteArrayArrayHelper ByteArrayArrayHolder ByteArrayHelper ByteArrayHolder Callback_ClientCallback_requestHeartbeat Heartbeat-request made by the server to guarantee that the client is alive.Callback_ClientCallback_sessionClosed The session to which this ServiceFactory is connected has been closed.Callback_ClientCallback_shutdownIn Message that the server will be shutting down in the given number of milliseconds, after which all new and running method invocations will receive a CancelledException.Callback_Exporter_addImage Adds a single image with basic metadata to the Exporter for inclusion on the next call to getBytes().Callback_Exporter_generateTiff Generates an OME-TIFF file.Callback_Exporter_generateXml Generates an OME-XML file.Callback_Exporter_read Returnslength
bytes from the output file.Callback_IAdmin_addGroupOwners Adds the given users to the owner list for this group.Callback_IAdmin_addGroups Adds a user to the given groups.Callback_IAdmin_canUpdate Returns true if the currently logged in user can modify the givenIObject
.Callback_IAdmin_changeExpiredCredentials Used after anExpiredCredentialException
instance is thrown.Callback_IAdmin_changeGroup Deprecated. changeGroup() is deprecated.Callback_IAdmin_changeOwner Deprecated. changeOwner() is deprecated.Callback_IAdmin_changePassword Changes the password for the current user.Callback_IAdmin_changePasswordWithOldPassword Changes the password for the current user by passing the old password.Callback_IAdmin_changePermissions Deprecated. changePermissions() is deprecated.Callback_IAdmin_changeUserPassword Changes the password for the a given user.Callback_IAdmin_containedExperimenters Fetches allExperimenter
users contained in this group.Callback_IAdmin_containedGroups Fetches allExperimenterGroup
groups of which the given user is a member.Callback_IAdmin_createExperimenter Creates and returns a new user in the given groups.Callback_IAdmin_createExperimenterWithPassword Creates and returns a new user in the given groups with password.Callback_IAdmin_createGroup Creates and returns a new group.Callback_IAdmin_createRestrictedSystemUser Creates and returns a new system user.Callback_IAdmin_createRestrictedSystemUserWithPassword Creates and returns a new system user.Callback_IAdmin_createSystemUser Creates and returns a new system user.Callback_IAdmin_createUser Creates and returns a new user.Callback_IAdmin_deleteExperimenter Removes a user by removing the password information for that user as well as allGroupExperimenterMap
instances.Callback_IAdmin_deleteGroup Removes a group by first removing all users in the group, and then deleting the actualExperimenterGroup
instance.Callback_IAdmin_getAdminPrivileges Gets the light administrator privileges for the given user.Callback_IAdmin_getAdminsWithPrivileges Gets the administrators who have all the given privileges.Callback_IAdmin_getCurrentAdminPrivileges Gets the light administrator privileges for the current user.Callback_IAdmin_getDefaultGroup Retrieves the defaultExperimenterGroup
group for the given user id.Callback_IAdmin_getEventContext Returns an implementation ofEventContext
loaded with the security for the current user and thread.Callback_IAdmin_getExperimenter Fetches anExperimenter
and all relatedExperimenterGroup
.Callback_IAdmin_getGroup Fetches anExperimenterGroup
and all containedExperimenter
users.Callback_IAdmin_getLeaderOfGroupIds Finds the ids for all groups for which the givenExperimenter
is owner/leader.Callback_IAdmin_getMemberOfGroupIds Finds the ids for all groups for which the givenExperimenter
is a member.Callback_IAdmin_getMyUserPhotos Retrieves theOriginalFile
object attached to this user as specified byuploadMyUserPhoto
.Callback_IAdmin_getSecurityRoles Returns the activeRoles
in use by the server.Callback_IAdmin_lookupExperimenter Looks up anExperimenter
and all relatedExperimenterGroup
by name.Callback_IAdmin_lookupExperimenters Looks up allExperimenter
experimenters present and all relatedExperimenterGroup
groups.Callback_IAdmin_lookupGroup Looks up anExperimenterGroup
and all containedExperimenter
users by name.Callback_IAdmin_lookupGroups Looks up allExperimenterGroup
groups present and all relatedExperimenter
experimenters.Callback_IAdmin_lookupLdapAuthExperimenter Looks upExperimenter
experimenters who use LDAP authentication (has set dn on password table).Callback_IAdmin_lookupLdapAuthExperimenters Looks up all ids ofExperimenter
experimenters who use LDAP authentication (has set dn on password table).Callback_IAdmin_moveToCommonSpace Moves the given objects into the user group to make them visible and linkable from all security contexts.Callback_IAdmin_removeGroupOwners removes the given users from the owner list for this group.Callback_IAdmin_removeGroups Removes an experimenter from the given groups.Callback_IAdmin_reportForgottenPassword Deprecated. reportForgottenPassword() is deprecated.Callback_IAdmin_setAdminPrivileges Sets the set of light administrator privileges for the given user.Callback_IAdmin_setDefaultGroup Sets the default group for a given user.Callback_IAdmin_setGroupOwner Adds the user to the owner list for this group.Callback_IAdmin_synchronizeLoginCache Uses JMX to refresh the login cache if supported.Callback_IAdmin_unsetGroupOwner Removes the user from the owner list for this group.Callback_IAdmin_updateExperimenter Updates an experimenter if admin or owner of group.Callback_IAdmin_updateExperimenterWithPassword Updates an experimenter if admin or owner of group.Callback_IAdmin_updateGroup Updates an experimenter group if admin or owner of group.Callback_IAdmin_updateSelf Allows a user to update his/her own information.Callback_IAdmin_uploadMyUserPhoto Uploads a photo for the user which will be displayed on his/her profile.Callback_IConfig_getClientConfigDefaults Reads the etc/omero.properties file and returns all the key/value pairs that are found there which match the prefix omero.client.Callback_IConfig_getClientConfigValues Retrieves configuration values likegetConfigValues
but only those with the prefix omero.client.Callback_IConfig_getConfigDefaults Reads the etc/omero.properties file and returns all the key/value pairs that are found there.Callback_IConfig_getConfigValue Retrieves a configuration value from the backend store.Callback_IConfig_getConfigValues Retrieves configuration values from the backend store which match the given regex.Callback_IConfig_getDatabaseTime Checks the database for its time using a SELECT statement.Callback_IConfig_getDatabaseUuid Provides the UUID for this OMERO (database) instance.Callback_IConfig_getServerTime Checks the current server for its time.Callback_IConfig_getVersion Provides the release version.Callback_IConfig_setConfigValue Sets a configuration value in the backend store.Callback_IConfig_setConfigValueIfEquals CallssetConfigValue
if and only if the configuration property is currently equal to the test argument.Callback_IContainer_createDataObject Creates the specified data object.Callback_IContainer_createDataObjects Convenience method to save network calls.Callback_IContainer_findContainerHierarchies Retrieves hierarchy trees in various hierarchies that contain the specified Images.Callback_IContainer_getCollectionCount Counts the number of members in a collection for a given object.Callback_IContainer_getImages Retrieve a user's (or all users') images within any given container.Callback_IContainer_getImagesByOptions Retrieves images by options.Callback_IContainer_getImagesBySplitFilesets Given a list of IDs of certain entity types, calculates which filesets are split such that a non-empty proper subset of their images are referenced, directly or indirectly, as being included.Callback_IContainer_getUserImages Retrieves a user's images.Callback_IContainer_link Convenience method for creating links.Callback_IContainer_loadContainerHierarchy Retrieves hierarchy trees rooted by a given node (unless orphan is specified -- See below)Callback_IContainer_retrieveCollection Retrieves a collection with all members initialized (loaded).Callback_IContainer_unlink Removes links between OmeroDataObjects e.g Project-Dataset, Dataset-Image Note that the objects themselves aren't deleted, only the Link objects.Callback_IContainer_updateDataObject Updates a data object.Callback_IContainer_updateDataObjects Convenience method to save network calls.Callback_ILdap_createUser Creates anExperimenter
entry in the OMERO DB based on the supplied LDAP username.Callback_ILdap_discover Discovers and listsExperimenter
s who are present in the remote LDAP server and in the local DB but have theldap
property set tofalse
.Callback_ILdap_discoverGroups Discovers and listsExperimenterGroup
s which are present in the remote LDAP server and in the local DB but have theldap
property set tofalse
.Callback_ILdap_findDN Searches unique Distinguished Name - string in LDAP for Common Name equals username.Callback_ILdap_findExperimenter Searches Experimenter by unique Distinguished Name - string in LDAP for Common Name equals username.Callback_ILdap_findGroup Looks up a specificExperimenterGroup
in LDAP using the provided group name.Callback_ILdap_findGroupDN Looks up the DN for a group.Callback_ILdap_getSetting Gets config value from properties.Callback_ILdap_searchAll Searches allExperimenter
list on LDAP for attribute objectClass = person.Callback_ILdap_searchByAttribute Searches allExperimenter
in LDAP for specified attribute.Callback_ILdap_searchByAttributes Searches allExperimenter
in LDAP for specified attributes.Callback_ILdap_searchByDN Searches oneExperimenter
in LDAP for specified Distinguished Name.Callback_ILdap_searchDnInGroups Searches Distinguished Name in groups.Callback_ILdap_setDN Deprecated. setDN() is deprecated.Callback_IMetadata_countAnnotationsUsedNotOwned Counts the number of annotation of a given type used by the specified user but not owned by the user.Callback_IMetadata_countSpecifiedAnnotations Counts the number of annotation of a given type.Callback_IMetadata_getTaggedObjectsCount Returns a map whose key is a tag id and the value the number of Projects, Datasets, and Images linked to that tag.Callback_IMetadata_loadAnnotation Loads the specified annotations.Callback_IMetadata_loadAnnotations Loads all the annotations of given types, that have been attached to the specifiedrootNodes
for the specifiedannotatorIds
.Callback_IMetadata_loadAnnotationsUsedNotOwned Loads the annotations of a given type used by the specified user but not owned by the user.Callback_IMetadata_loadChannelAcquisitionData Loads the logical channels and the acquisition metadata related to them.Callback_IMetadata_loadInstrument Loads the instrument and its components i.e.Callback_IMetadata_loadLogFiles Finds the original file IDs for the import logs corresponding to the given Image or Fileset IDs.Callback_IMetadata_loadSpecifiedAnnotations Loads all the annotations of a given type.Callback_IMetadata_loadSpecifiedAnnotationsLinkedTo Loads the annotations of a given type linked to the specified objects.Callback_IMetadata_loadTagContent Loads the TagSet if the id is specified otherwise loads all the TagSet.Callback_IMetadata_loadTagSets Loads all the TagSets.Callback_IPixels_copyAndResizeImage Copies the metadata, and only the metadata linked to a Image object into a new Image object of equal or differing size across one or many of its three physical dimensions or temporal dimension.Callback_IPixels_copyAndResizePixels Copies the metadata, and only the metadata linked to a Pixels object into a new Pixels object of equal or differing size across one or many of its three physical dimensions or temporal dimension.Callback_IPixels_createImage Creates the metadata, and only the metadata linked to an Image object.Callback_IPixels_getAllEnumerations Deprecated. Use ITypes#allEnumerations(string) instead.Callback_IPixels_getBitDepth Bit depth for a given pixel type.Callback_IPixels_getEnumeration Deprecated. Use ITypes#getEnumeration(string, string) instead.Callback_IPixels_loadRndSettings Loads a specific set of rendering settings.Callback_IPixels_retrieveAllRndSettings Retrieves all the rendering settings for a given pixels set and the passed user.Callback_IPixels_retrievePixDescription Retrieves the pixels metadata.Callback_IPixels_retrieveRndSettings Retrieves the rendering settings for a given pixels set and the currently logged in user.Callback_IPixels_retrieveRndSettingsFor Retrieves the rendering settings for a given pixels set and the passed user.Callback_IPixels_saveRndSettings Saves the specified rendering settings.Callback_IPixels_setChannelGlobalMinMax Sets the channel global (all 2D optical sections corresponding to a particular channel) minimum and maximum for a Pixels set.Callback_IProjection_projectPixels Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Callback_IProjection_projectStack Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Callback_IQuery_find Looks up an entity by class and id.Callback_IQuery_findAll Looks up all entities that belong to this class and match filter.Callback_IQuery_findAllByExample Searches based on provided example entity.Callback_IQuery_findAllByFullText Executes a full text search based on Lucene.Callback_IQuery_findAllByQuery Executes the stored query with the given name.Callback_IQuery_findAllByString Searches a given field matching against a String.Callback_IQuery_findByExample Searches based on provided example entity.Callback_IQuery_findByQuery Executes the stored query with the given name.Callback_IQuery_findByString Searches a given field matching against a String.Callback_IQuery_get Looks up an entity by class and id.Callback_IQuery_projection Return a sequence ofRType
sequences.Callback_IQuery_refresh Refreshes an entireIObject
graph, recursive loading all data for the managed instances in the graph from the database.Callback_IRenderingSettings_applySettingsToDataset Applies rendering settings to all images in a given Dataset.Callback_IRenderingSettings_applySettingsToImage Applies rendering settings to a given Image.Callback_IRenderingSettings_applySettingsToImages Applies rendering settings to a given Image.Callback_IRenderingSettings_applySettingsToPixels Applies rendering settings to a given Pixels.Callback_IRenderingSettings_applySettingsToProject Applies rendering settings to all images in all Datasets of a given Project.Callback_IRenderingSettings_applySettingsToSet Applies rendering settings to one or many containers.Callback_IRenderingSettings_createNewRenderingDef Creates a new rendering definition object along with its sub-objects.Callback_IRenderingSettings_getRenderingSettings Returns the default rendering settings for a given pixels for the current user.Callback_IRenderingSettings_resetDefaults Resets the given rendering settings to those that are specified by the rendering engine intelligent pretty good image (PG) logic for the pixels set linked to that set of rendering settings.Callback_IRenderingSettings_resetDefaultsByOwnerInSet Resets the rendering settings of a given group of containers based on the owner's (essentially a copy).Callback_IRenderingSettings_resetDefaultsForPixels Resets a Pixels' default rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.Callback_IRenderingSettings_resetDefaultsInDataset Resets a dataset's rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.Callback_IRenderingSettings_resetDefaultsInImage Resets an image's default rendering settings back to those that are specified by the rendering engine intelligent pretty good image (PG) logic.Callback_IRenderingSettings_resetDefaultsInSet Resets a rendering settings back to one or many containers that are specified by the rendering engine intelligent pretty good image (PG) logic.Callback_IRenderingSettings_resetDefaultsNoSave Resets the given rendering settings to those that are specified by the rendering engine intelligent pretty good image (PG) logic for the pixels set linked to that set of rendering settings.Callback_IRenderingSettings_resetMinMaxInSet Resets a the channel windows for one or many containers back to their global minimum and global maximum for the channel.Callback_IRenderingSettings_sanityCheckPixels Checks if the specified sets of pixels are compatible.Callback_IRenderingSettings_setOriginalSettingsForPixels Resets an Pixels' default rendering settings back to channel global minimum and maximum.Callback_IRenderingSettings_setOriginalSettingsInDataset Resets a dataset's rendering settings back to channel global minimum and maximum.Callback_IRenderingSettings_setOriginalSettingsInImage Resets an image's default rendering settings back to channel global minimum and maximum.Callback_IRenderingSettings_setOriginalSettingsInSet Resets a rendering settings back to channel global minimum and maximum for the specified containers.Callback_IRepositoryInfo_getFreeSpaceInKilobytes Returns the free or available space on this file system including nested subdirectories.Callback_IRepositoryInfo_getUsageFraction Returns a double of the used space divided by the free space.Callback_IRepositoryInfo_getUsedSpaceInKilobytes Returns the total space in bytes for this file system including nested subdirectories.Callback_IRepositoryInfo_removeUnusedFiles Removes all files from the server that do not have an OriginalFile complement in the database, all the Pixels that do not have a complement in the database and all the Thumbnail's that do not have a complement in the database.Callback_IRepositoryInfo_sanityCheckRepository Checks that image data repository has not exceeded 95% disk space use level.Callback_IRoi_findByImage Deprecated. IROI is deprecated.Callback_IRoi_findByPlane Deprecated. IROI is deprecated.Callback_IRoi_findByRoi Deprecated. IROI is deprecated.Callback_IRoi_getMeasuredRois Deprecated. IROI is deprecated.Callback_IRoi_getMeasuredRoisMap Deprecated. IROI is deprecated.Callback_IRoi_getPoints Deprecated. IROI is deprecated.Callback_IRoi_getRoiMeasurements Deprecated. IROI is deprecated.Callback_IRoi_getRoiStats Deprecated. IROI is deprecated.Callback_IRoi_getShapeStats Deprecated. IROI is deprecated.Callback_IRoi_getShapeStatsList Deprecated. IROI is deprecated.Callback_IRoi_getShapeStatsRestricted Deprecated. IROI is deprecated.Callback_IRoi_getTable Deprecated. IROI is deprecated.Callback_IRoi_uploadMask Deprecated. IROI is deprecated.Callback_IScript_canRunScript Returns true if there is a processor which will run the given script.Callback_IScript_deleteScript Delete the script on the server with id.Callback_IScript_editScript Modify the text for the given script object.Callback_IScript_getParams Get the parameters that the script takes and returns, along with other metadata available from the script.Callback_IScript_getScriptID Get the id of an official script by the script path.Callback_IScript_getScripts This method returns official server scripts as a list ofOriginalFile
objects.Callback_IScript_getScriptsByMimetype This method returns official server scripts identified with the specified extension as a list ofOriginalFile
objects.Callback_IScript_getScriptText Get the text from the server for the script with given id.Callback_IScript_getScriptWithDetails Get the script from the server with details from OriginalFileCallback_IScript_getUserScripts Returns non-official scripts which have been uploaded by individual users.Callback_IScript_runScript IfResourceError
is thrown, then noProcessor
is available.Callback_IScript_uploadOfficialScript LikeuploadScript
but is only callable by administrators.Callback_IScript_uploadScript Upload a user script to the server and return the id.Callback_IScript_validateScript Used internally by processor.py to check if the script attached to theJob
has a valid script attached, based on theacceptsList
and the current security context.Callback_ISession_closeSession Closes session and releases all resources.Callback_ISession_createSession Creates a new session and returns it to the user.Callback_ISession_createSessionWithTimeout Allows an admin to create aSession
for the givePrincipal
.Callback_ISession_createSessionWithTimeouts Allows an admin to create aSession
for the givenPrincipal
.Callback_ISession_createUserSession Allows a user to open up another session for him/herself with the given defaults without needing to re-enter password.Callback_ISession_getInput Retrieves an entry from the givenSession
input environment.Callback_ISession_getInputKeys Retrieves all keys in theSession
input environment.Callback_ISession_getInputs Retrieves all inputs from the givenSession
input environment.Callback_ISession_getMyOpenAgentSessions LikegetMyOpenSessions
but returns only those sessions with the given agent string.Callback_ISession_getMyOpenClientSessions LikegetMyOpenSessions
but returns only those sessions started by official OMERO clients.Callback_ISession_getMyOpenSessions Returns a list of open sessions for the current user.Callback_ISession_getOutput Retrieves an entry from theSession
output environment.Callback_ISession_getOutputKeys Retrieves all keys in theSession
output environment.Callback_ISession_getOutputs Retrieves all outputs from the givenSession
input environment.Callback_ISession_getReferenceCount Retrieves the current reference count for the given uuid.Callback_ISession_getSession Retrieves the session associated with this uuid, updating the last access time as well.Callback_ISession_setInput Places an entry in the givenSession
input environment.Callback_ISession_setOutput Places an entry in the givenSession
output environment.Callback_IShare_activate Turns on the access control lists attached to the given share for the current session.Callback_IShare_addComment CreatesTextAnnotation
comment forSession
share.Callback_IShare_addGuest Adds guest email address to the share.Callback_IShare_addGuests Adds guest email addresses to the share.Callback_IShare_addObject Callback_IShare_addObjects Callback_IShare_addReply CreatesTextAnnotation
comment which replies to an existing comment.Callback_IShare_addUser AddsExperimenter
experimenter toSession
share.Callback_IShare_addUsers AddsExperimenter
experimenters toSession
share.Callback_IShare_closeShare ClosesSession
share.Callback_IShare_createShare Callback_IShare_deactivate Turns off the access control lists with the current share.Callback_IShare_deleteComment DeletesAnnotation
comment from the database.Callback_IShare_getActiveConnections Gets actual active connections toSession
share.Callback_IShare_getAllGuests Get the email addresses for all share guests.Callback_IShare_getAllMembers Get allExperimenter
users who are a member of the share.Callback_IShare_getAllUsers Get a single set containing theomero.model.Experimenter.getOmeName
login names of the users as well email addresses for guests.Callback_IShare_getCommentCount Returns a map from share id to comment count.Callback_IShare_getComments Looks up allAnnotation
comments which belong to theSession
share.Callback_IShare_getContentMap Returns the contents of the share keyed by type.Callback_IShare_getContents Callback_IShare_getContentSize Returns the number of items in the share.Callback_IShare_getContentSubList Returns a range of items from the share.Callback_IShare_getEvents Gets events forSession
share perExperimenter
experimenter for period of time.Callback_IShare_getMemberCount Returns a map from share id to the count of total members (including the owner).Callback_IShare_getMemberShares Gets all shares where currentExperimenter
is a member.Callback_IShare_getMemberSharesFor Gets all shares where givenExperimenter
is a member.Callback_IShare_getOwnShares Gets all owned shares for the currentExperimenter
.Callback_IShare_getPastConnections Gets previous connections toSession
share.Callback_IShare_getShare Gets a share as aSession
with all related:Annotation
comments,Experimenter
members, fully loaded.Callback_IShare_getSharesOwnedBy Gets all shares owned by the givenExperimenter
.Callback_IShare_invalidateConnection Makes the connection invalid forSession
share for specified user.Callback_IShare_notifyMembersOfShare Notifies via email selected members of share.Callback_IShare_removeGuest Removes guest email address from share.Callback_IShare_removeGuests Removes guest email addresses from the share.Callback_IShare_removeObject Callback_IShare_removeObjects Remove existing items from the share.Callback_IShare_removeUser RemovesExperimenter
experimenter fromSession
share.Callback_IShare_removeUsers RemovesExperimenter
experimenters fromSession
share.Callback_IShare_setActive Callback_IShare_setDescription Callback_IShare_setExpiration Callback_ITimeline_countByPeriod Queries the same information as getByPeriod, but only returns the counts for the given objects.Callback_ITimeline_getByPeriod Returns the given LIMIT objects of TYPES as ordered by creation/modification times in the Event table, but within the given time window.Callback_ITimeline_getEventLogsByPeriod Returns the EventLog table objects which are queried to produce the counts above.Callback_ITimeline_getMostRecentAnnotationLinks Return the last LIMIT annotation __Links__ whose parent (IAnnotated) matches one of the parentTypes, whose child (Annotation) matches one of the childTypes (limit of one for the moment), and who namespace matches via ILIKE.Callback_ITimeline_getMostRecentObjects Returns the last LIMIT objects of TYPES as ordered by creation/modification times in the Event table.Callback_ITimeline_getMostRecentShareCommentLinks Return the last LIMIT comment annotation links attached to a share by __others__.Callback_ITypes_allEnumerations Callback_ITypes_createEnumeration Callback_ITypes_deleteEnumeration Deletes enumeration value specified by object.Callback_ITypes_getAnnotationTypes Returns a list of classes which implementIAnnotated
.Callback_ITypes_getEnumeration Lookup an enumeration value.Callback_ITypes_getEnumerationsWithEntries Gets all metadata classes which are IEnum type with contained objects.Callback_ITypes_getEnumerationTypes Gets all metadata classes which are IEnum type.Callback_ITypes_getOriginalEnumerations Gets all original values.Callback_ITypes_resetEnumerations Callback_ITypes_updateEnumeration Updates enumeration value specified by object.Callback_ITypes_updateEnumerations Updates enumeration value specified by object.Callback_IUpdate_deleteObject Deprecated. use omero::cmd::Delete2 insteadCallback_IUpdate_indexObject Initiates full-text indexing for the given object.Callback_IUpdate_saveAndReturnArray Callback_IUpdate_saveAndReturnIds Callback_IUpdate_saveAndReturnObject Callback_IUpdate_saveArray Callback_IUpdate_saveCollection Callback_IUpdate_saveObject Callback_JobHandle_attach Returns the currentJobStatus
for the Job id.Callback_JobHandle_cancelJob Marks a job for cancellation.Callback_JobHandle_getJob Returns the currentJob
Callback_JobHandle_jobError Returnstrue
if theJob
has thrown an error.Callback_JobHandle_jobFinished Callback_JobHandle_jobMessage Returns the current message for job.Callback_JobHandle_jobRunning Returnstrue
if theJob
is running, i.e.Callback_JobHandle_jobStatus Returns the currentJobStatus
.Callback_JobHandle_setMessage Sets the job's message string, and returns the previous value.Callback_JobHandle_setStatus Updates theJobStatus
for the current job.Callback_JobHandle_setStatusAndMessage LikesetStatus
but also sets the message.Callback_JobHandle_submit Submits aJob
and returns its database id.Callback_MetadataStore_createRoot Callback_MetadataStore_populateMinMax Callback_MetadataStore_postProcess Callback_MetadataStore_saveToDB Callback_MetadataStore_setPixelsFile Callback_MetadataStore_updateObjects Callback_MetadataStore_updateReferences Callback_PyramidService_getResolutionDescriptions Retrieves a more complete definition of the resolution level in question.Callback_PyramidService_getResolutionLevel Retrieves the active resolution level.Callback_PyramidService_getResolutionLevels Retrieves the number of resolution levels that the backing pixels pyramid contains.Callback_PyramidService_getTileSize Retrieves the tile size for the pixel store.Callback_PyramidService_requiresPixelsPyramid Whether or not this raw pixels store requires a backing pixels pyramid to provide sub-resolutions of the data.Callback_PyramidService_setResolutionLevel Sets the active resolution level.Callback_RawFileStore_exists Checks to see if a raw file exists with the file ID that the service was initialized with.Callback_RawFileStore_getFileId Returns the current file id or null if none has been set.Callback_RawFileStore_read Readslength
bytes of data at theposition
from the raw file into an array of bytes.Callback_RawFileStore_save Saves theOriginalFile
associated with the service if it has been modified.Callback_RawFileStore_setFileId This method manages the state of the service.Callback_RawFileStore_size Returns the size of the file on disk (not as stored in the database since that value will only be updated onsave
.Callback_RawFileStore_truncate Limits the size of a file to the given length.Callback_RawFileStore_write Writeslength
bytes of data from the specifiedbuf
byte array starting at atposition
to the raw file.Callback_RawPixelsStore_calculateMessageDigest Calculates a SHA-1 message digest for the entire pixel store.Callback_RawPixelsStore_findMinMax Find the minimum and maximum pixel values for the specified channels by iterating over a full plane.Callback_RawPixelsStore_getByteWidth Returns the byte width for the pixel store.Callback_RawPixelsStore_getCol Retrieves a particular column from this pixel store.Callback_RawPixelsStore_getHistogram Retrieves the histogram data for the specified plane and channels.Callback_RawPixelsStore_getHypercube Retrieves a n-dimensional block from this pixel store.Callback_RawPixelsStore_getPixelsId Returns the current Pixels set identifier.Callback_RawPixelsStore_getPixelsPath Returns the current Pixels path.Callback_RawPixelsStore_getPlane Retrieves a particular 2D image plane from this pixel store.Callback_RawPixelsStore_getPlaneOffset Retrieves the offset for a particular 2D image plane in this pixel store.Callback_RawPixelsStore_getPlaneRegion Retrieves a region from a given plane from this pixel store.Callback_RawPixelsStore_getPlaneSize Retrieves the in memory size of a 2D image plane in this pixel store.Callback_RawPixelsStore_getRegion Retrieves a region from this pixel store.Callback_RawPixelsStore_getRow Retrieves a particular row or scanline from this pixel store.Callback_RawPixelsStore_getRowOffset Retrieves the offset for a particular row or scanline in this pixel store.Callback_RawPixelsStore_getRowSize Retrieves the in memory size of a row or scanline of pixels in this pixel store.Callback_RawPixelsStore_getStack Retrieves the the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.Callback_RawPixelsStore_getStackOffset Retrieves the offset for the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.Callback_RawPixelsStore_getStackSize Retrieves the in memory size of the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.Callback_RawPixelsStore_getTile Retrieves a tile from this pixel buffer.Callback_RawPixelsStore_getTimepoint Retrieves the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.Callback_RawPixelsStore_getTimepointOffset Retrieves the in memory size of the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.Callback_RawPixelsStore_getTimepointSize Retrieves the in memory size of the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.Callback_RawPixelsStore_getTotalSize Retrieves the in memory size of the entire pixel store.Callback_RawPixelsStore_isFloat Returns whether or not the pixel buffer has floating point pixels.Callback_RawPixelsStore_isSigned Returns whether or not the pixel store has signed pixels.Callback_RawPixelsStore_prepare Prepares the stateful service with a cache of loaded Pixels objects.Callback_RawPixelsStore_save Save the current state of the pixels, updating the SHA1.Callback_RawPixelsStore_setPixelsId Initializes the stateful service for a given Pixels set.Callback_RawPixelsStore_setPlane Sets a particular 2D image plane in this pixel store.Callback_RawPixelsStore_setRegion Sets a region in this pixel buffer.Callback_RawPixelsStore_setRow Sets a particular row or scanline in this pixel store.Callback_RawPixelsStore_setStack Sets the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.Callback_RawPixelsStore_setTile Sets a tile in this pixel buffer.Callback_RawPixelsStore_setTimepoint Sets the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.Callback_RenderingEngine_addCodomainMap Deprecated. addCodomainMap() is deprecated.Callback_RenderingEngine_addCodomainMapToChannel Adds the context to the mapping chain.Callback_RenderingEngine_getAvailableFamilies Returns the list of mapping families supported by the Rendering engine.Callback_RenderingEngine_getAvailableModels Returns the list of color models supported by the Rendering engine.Callback_RenderingEngine_getChannelCurveCoefficient Returns the coefficient identifying a map in the family.Callback_RenderingEngine_getChannelFamily Returns the family associated to the specified channel.Callback_RenderingEngine_getChannelLookupTable Callback_RenderingEngine_getChannelNoiseReduction Returnstrue
if the noise reduction algorithm used to map the pixels intensity values is turned on,false
if the algorithm is turned off.Callback_RenderingEngine_getChannelStats Callback_RenderingEngine_getChannelWindowEnd Returns the upper bound of the pixels intensity interval.Callback_RenderingEngine_getChannelWindowStart Returns the lower bound of the pixels intensity interval.Callback_RenderingEngine_getCodomainMapContext Returns the list of codomain contexts for the specified channel.Callback_RenderingEngine_getCompressionLevel Returns the current compression level for the service.Callback_RenderingEngine_getDefaultT Returns the default timepoint index.Callback_RenderingEngine_getDefaultZ Returns the index of the default focal section.Callback_RenderingEngine_getModel Returns the model that dictates how transformed raw data has to be mapped onto a color space.Callback_RenderingEngine_getPixels Returns thePixels
set the Rendering engine is for.Callback_RenderingEngine_getPixelsTypeLowerBound Returns the maximum value for that channels depending on the pixels type and the original range (globalmin, globalmax)Callback_RenderingEngine_getPixelsTypeUpperBound Returns the minimum value for that channels depending on the pixels type and the original range (globalmin, globalmax)Callback_RenderingEngine_getQuantumDef Returns the quantization object.Callback_RenderingEngine_getRenderingDefId Callback_RenderingEngine_getRGBA Returns a 4D-array representing the color associated to the specified channel.Callback_RenderingEngine_isActive Returnstrue
if the channel is mapped,false
otherwise.Callback_RenderingEngine_isPixelsTypeSigned Returnstrue
if the pixels type is signed,false
otherwise.Callback_RenderingEngine_load Creates an instance of the rendering engine.Callback_RenderingEngine_loadRenderingDef Loads a specific set of rendering settings that does not necessarily have to be linked to the given Pixels set.Callback_RenderingEngine_lookupPixels Loads the Pixels set this Rendering Engine is for.Callback_RenderingEngine_lookupRenderingDef Loads the rendering settings associated to the specified pixels set.Callback_RenderingEngine_removeCodomainMap Deprecated. removeCodomainMap() is deprecated.Callback_RenderingEngine_removeCodomainMapFromChannel Removes the specified context from the chain.Callback_RenderingEngine_render Renders the data selected bydef
according to the current rendering settings.Callback_RenderingEngine_renderAsPackedInt Renders the data selected bydef
according to the current rendering settings.Callback_RenderingEngine_renderCompressed Renders the data selected bydef
according to the current rendering settings and compresses the resulting RGBA composite image.Callback_RenderingEngine_renderProjectedAsPackedInt Performs a projection through selected optical sections of a particular timepoint with the currently active channels and renders the data for display.Callback_RenderingEngine_renderProjectedCompressed Performs a projection through selected optical sections of a particular timepoint with the currently active channels, renders the data for display and compresses the resulting RGBA composite image.Callback_RenderingEngine_resetDefaultSettings Resets the default settings i.e.Callback_RenderingEngine_saveAsNewSettings Saves the current rendering settings in the database as a newRenderingDef
and loads the object into the currentRenderingEngine
.Callback_RenderingEngine_saveCurrentSettings Saves the current rendering settings in the database.Callback_RenderingEngine_setActive Maps the specified channel iftrue
, unmaps the channel otherwise.Callback_RenderingEngine_setChannelLookupTable Callback_RenderingEngine_setChannelWindow Returns the pixels intensity interval.Callback_RenderingEngine_setCodomainInterval Sets the sub-interval of the device space i.e.Callback_RenderingEngine_setCompressionLevel Sets the current compression level for the service.Callback_RenderingEngine_setDefaultT Sets the default timepoint index.Callback_RenderingEngine_setDefaultZ Sets the index of the default focal section.Callback_RenderingEngine_setModel Specifies the model that dictates how transformed raw data has to be mapped onto a color space.Callback_RenderingEngine_setOverlays Deprecated. use omero::romio::PlaneDefWithMasks insteadCallback_RenderingEngine_setQuantizationMap Sets the quantization map, one per channel.Callback_RenderingEngine_setQuantumStrategy Sets the quantization strategy.Callback_RenderingEngine_setRGBA Sets the four components composing the color associated to the specified channel.Callback_RenderingEngine_updateCodomainMap Deprecated. removeCodomainMap() is deprecated.Callback_RenderingEngine_updateSettings Updates the current rendering settings based on a provided rendering definition and associated sub-objects.Callback_Search_activeQueries Returns the number of active queries.Callback_Search_addOrderByAsc A path from the target entity which will be added to the current stack of order statements applied to the query.Callback_Search_addOrderByDesc A path from the target entity which will be added to the current stack of order statements applied to the query.Callback_Search_allTypes Permits all types to be returned.Callback_Search_and Applies the next by* method to the previous by* method, so that a callhasNext
,next
, orresults
sees only the intersection of the two calls.Callback_Search_byAnnotatedWith Finds entities annotated with anAnnotation
similar to the example.Callback_Search_byFullText Passes the query as is to the Lucene backend.Callback_Search_byGroupForTags Returns transient (without ID)TagAnnotation
instances which represent all theTagAnnotation
tags in the given group.Callback_Search_byHqlQuery Delegates toomero.api.IQuery.findAllByQuery
method to take advantage of theand
,or
, andnot
methods, or queue-semantics.Callback_Search_byLuceneQueryBuilder Builds a Lucene query and passes it to the Lucene backend.Callback_Search_bySimilarTerms Returns transient (without ID)TextAnnotation
instances which represent terms which are similar to the given terms.Callback_Search_bySomeMustNone Builds a Lucene query and passes it tobyFullText
.Callback_Search_byTagForGroups Creates a query which will return transient (without ID)TagAnnotation
instances which represent all theTagAnnotation
tag groups which the given tag belongs to.Callback_Search_clearQueries Removes all active queries (leavingresetDefaults
settings alone), such thatactiveQueries
will return 0.Callback_Search_currentMetadata Provides access to the extra query information (for example Lucene score and boost values) for a single call tonext
.Callback_Search_currentMetadataList Provides access to the extra query information (for example Lucene score and boost values) for a single call toresults
.Callback_Search_fetchAlso Adds a fetch clause for loading non-annotation fields of returned entities.Callback_Search_fetchAnnotations Queries the database for allAnnotation
annotations of the given types for all returned instances.Callback_Search_getBatchSize Returns the current batch size.Callback_Search_hasNext Returnstrue
if another call tonext
is valid.Callback_Search_isAllowLeadingWildcard Returns the current leading-wildcard setting.Callback_Search_isCaseSensitive Returns the current case sensitivity setting.Callback_Search_isMergedBatches Returns the current merged-batches setting.Callback_Search_isReturnUnloaded Returns the current return-unloaded setting.Callback_Search_isUseProjections Returns the current use-projection setting.Callback_Search_next Returns the next entity from the current query.Callback_Search_not Applies the next by* method to the previous by* method, so that a callhasNext
,next
, orresults
sees only the intersection of the two calls.Callback_Search_notAnnotatedBy Restricts entities by who has not annotated them with anAnnotation
matching the other filters.Callback_Search_notOwnedBy Uses theDetails.getOwner()
andDetails.getGroup()
information to restrict the entities which will be returned.Callback_Search_onlyAnnotatedBetween Restricts entities by the time in which any annotation (which matches the other filters) was added them.Callback_Search_onlyAnnotatedBy Restricts entities by who has annotated them with anAnnotation
matching the other filters.Callback_Search_onlyAnnotatedWith Restricts entities to having anAnnotation
of all the given types.Callback_Search_onlyCreatedBetween Restricts the time between which an entity may have been created.Callback_Search_onlyIds Restricts the set of ids which will be checked.Callback_Search_onlyModifiedBetween Restricts the time between which an entity may have last been modified.Callback_Search_onlyOwnedBy Uses theDetails.getOwner()
andDetails.getGroup()
information to restrict the entities which will be returned.Callback_Search_onlyType Restricts the search to a single type.Callback_Search_onlyTypes Restricts searches to a set of types.Callback_Search_or Applies the next by* method to the previous by* method, so that a callhasNext
,next
orresults
sees only the union of the two calls.Callback_Search_remove Unsupported operation.Callback_Search_resetDefaults Resets all settings (non-query state) to the original default values, as if the instance had just be created.Callback_Search_results Returns up togetBatchSize
batch size number of results along with the related query metadata.Callback_Search_setAllowLeadingWildcard Permits full-text queries with a leading query if true.Callback_Search_setBatchSize Sets the maximum number of results that will be returned by one call toresults
.Callback_Search_setCaseSensitive Sets the case sensitivity on all queries where case-sensitivity is supported.Callback_Search_setCaseSentivice Deprecated. use setCaseSensitive insteadCallback_Search_setMergedBatches Set whether or not results from two separate queries can be returned in the same call toresults
.Callback_Search_setReturnUnloaded Determines if all results should be returned as unloaded objects.Callback_Search_setUseProjections Determines if Lucene queries should not hit the database.Callback_Search_unordered Removes the current stack of order statements.Callback_ServiceFactory_activeServices Returns a list of string ids for currently active services.Callback_ServiceFactory_closeOnDestroy Marks the session for closure rather than detachment, which will be triggered by the destruction of the Glacier2 connection via router.destroySession() Closing the session rather the detaching is more secure, since all resources are removed from the server and can safely be set once it is clear that a client is finished with those resources.Callback_ServiceFactory_createByName Allows looking up any stateful service by name.Callback_ServiceFactory_createExporter Callback_ServiceFactory_createJobHandle Callback_ServiceFactory_createRawFileStore Callback_ServiceFactory_createRawPixelsStore Callback_ServiceFactory_createRenderingEngine Callback_ServiceFactory_createSearchService Callback_ServiceFactory_createThumbnailStore Callback_ServiceFactory_detachOnDestroy Marks the session for detachment rather than closure, which will be triggered by the destruction of the Glacier2 connection via router.destroySession() This is the default and allows a lost session to be reconnected, at a slight security cost since the session will persist longer and can be used by others if the UUID is intercepted.Callback_ServiceFactory_getAdminService Callback_ServiceFactory_getByName Allows looking up any stateless service by name.Callback_ServiceFactory_getConfigService Callback_ServiceFactory_getContainerService Callback_ServiceFactory_getLdapService Callback_ServiceFactory_getMetadataService Callback_ServiceFactory_getPixelsService Callback_ServiceFactory_getProjectionService Callback_ServiceFactory_getQueryService Callback_ServiceFactory_getRenderingSettingsService Callback_ServiceFactory_getRepositoryInfoService Callback_ServiceFactory_getRoiService Callback_ServiceFactory_getScriptService Callback_ServiceFactory_getSecurityContexts Provides a list of all valid security contexts for this session.Callback_ServiceFactory_getSessionService Callback_ServiceFactory_getShareService Callback_ServiceFactory_getTimelineService Callback_ServiceFactory_getTypesService Callback_ServiceFactory_getUpdateService Callback_ServiceFactory_keepAlive Returns true if the given service is alive.Callback_ServiceFactory_keepAllAlive Requests that the given services be marked as alive.Callback_ServiceFactory_setCallback Sets the single callback used by the ServiceFactory to communicate with the client application.Callback_ServiceFactory_setSecurityContext Changes the security context for the current session.Callback_ServiceFactory_setSecurityPassword Re-validates the password for the current session.Callback_ServiceFactory_sharedResources Returns a reference to a back-end manager.Callback_ServiceFactory_subscribe Subscribe to a given topic.Callback_StatefulServiceInterface_activate Load a service implementation from disk if it was previously passivated.Callback_StatefulServiceInterface_close Frees all resources -- passivated or active -- for the given stateful service and removes its name from the object adapter.Callback_StatefulServiceInterface_getCurrentEventContext To free clients from tracking the mapping from session to stateful service, each stateful service can returns its own context information.Callback_StatefulServiceInterface_passivate Causes the blitz server to store the service implementation to disk to free memory.Callback_ThumbnailStore_createThumbnail Creates a thumbnail for a pixels set using a given set of rendering settings (RenderingDef) in the on-disk cache.Callback_ThumbnailStore_createThumbnails Creates thumbnails for a pixels set using a given set of rendering settings (RenderingDef) in the on-disk cache for every sizeX/sizeY combination already cached.Callback_ThumbnailStore_createThumbnailsByLongestSideSet Creates thumbnails for a number of pixels sets using a given set of rendering settings (RenderingDef) in the on-disk cache.Callback_ThumbnailStore_getRenderingDefId Return the id of theRenderingDef
loaded in this instance.Callback_ThumbnailStore_getThumbnail Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).Callback_ThumbnailStore_getThumbnailByLongestSide Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).Callback_ThumbnailStore_getThumbnailByLongestSideDirect Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).Callback_ThumbnailStore_getThumbnailByLongestSideSet Retrieves a number of thumbnails for pixels sets using given sets of rendering settings (RenderingDef).Callback_ThumbnailStore_getThumbnailDirect Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).Callback_ThumbnailStore_getThumbnailForSectionByLongestSideDirect Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef) for a particular section.Callback_ThumbnailStore_getThumbnailForSectionDirect Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef) for a particular section.Callback_ThumbnailStore_getThumbnailSet Retrieves a number of thumbnails for pixels sets using given sets of rendering settings (RenderingDef).Callback_ThumbnailStore_getThumbnailWithoutDefault Retrieves a thumbnail for a pixels set using a given set of rendering settings (RenderingDef).Callback_ThumbnailStore_isInProgress This returns the last available in progress state for a thumbnail.Callback_ThumbnailStore_resetDefaults Resets the rendering definition for the active pixels set to its default settings.Callback_ThumbnailStore_setPixelsId This method manages the state of the service; it must be invoked before using any other methods.Callback_ThumbnailStore_setRenderingDefId This method manages the state of the service; it should be invoked directly aftersetPixelsId
.Callback_ThumbnailStore_thumbnailExists Checks if a thumbnail of a particular size exists for a pixels set.ChecksumAlgorithmListHelper ChecksumAlgorithmListHolder ClientCallbackHolder ClientCallbackPrxHelper Provides type-specific helper functions.ClientCallbackPrxHolder DatasetListHelper DatasetListHolder DoubleArrayArrayArrayHelper DoubleArrayArrayArrayHolder DoubleArrayArrayHelper DoubleArrayArrayHolder DoubleArrayHelper DoubleArrayHolder EventContextListHelper EventContextListHolder EventListHelper EventListHolder EventLogListHelper EventLogListHolder ExperimenterGroupListHelper ExperimenterGroupListHolder ExperimenterListHelper ExperimenterListHolder ExporterHolder ExporterPrxHelper Provides type-specific helper functions.ExporterPrxHolder FloatArrayArrayArrayHelper FloatArrayArrayArrayHolder FloatArrayArrayHelper FloatArrayArrayHolder FloatArrayHelper FloatArrayHolder IAdminHolder IAdminPrxHelper Provides type-specific helper functions.IAdminPrxHolder IConfigHolder IConfigPrxHelper Provides type-specific helper functions.IConfigPrxHolder IContainerHolder IContainerPrxHelper Provides type-specific helper functions.IContainerPrxHolder IdBooleanLongListMapMapHelper IdBooleanLongListMapMapHolder IdListMapHelper IdListMapHolder ILdapHolder ILdapPrxHelper Provides type-specific helper functions.ILdapPrxHolder ImageListHelper ImageListHolder IMetadataHolder IMetadataPrxHelper Provides type-specific helper functions.IMetadataPrxHolder IntegerArrayArrayArrayHelper IntegerArrayArrayArrayHolder IntegerArrayArrayHelper IntegerArrayArrayHolder IntegerArrayHelper IntegerArrayHolder IntegerDoubleArrayMapHelper IntegerDoubleArrayMapHolder IntegerIntegerArrayMapHelper IntegerIntegerArrayMapHolder IntegerListHelper IntegerListHolder IntShapeListMapHelper IntShapeListMapHolder IntStringMapHelper IntStringMapHolder IObjectListHelper IObjectListHolder IObjectListMapHelper IObjectListMapHolder IPixelsHolder IPixelsPrxHelper Provides type-specific helper functions.IPixelsPrxHolder IProjectionHolder IProjectionPrxHelper Provides type-specific helper functions.IProjectionPrxHolder IQueryHolder IQueryPrxHelper Provides type-specific helper functions.IQueryPrxHolder IRenderingSettingsHolder IRenderingSettingsPrxHelper Provides type-specific helper functions.IRenderingSettingsPrxHolder IRepositoryInfoHolder IRepositoryInfoPrxHelper Provides type-specific helper functions.IRepositoryInfoPrxHolder IRoiHolder IRoiPrxHelper Provides type-specific helper functions.IRoiPrxHolder IScriptHolder IScriptPrxHelper Provides type-specific helper functions.IScriptPrxHolder ISessionHolder ISessionPrxHelper Provides type-specific helper functions.ISessionPrxHolder IShareHolder ISharePrxHelper Provides type-specific helper functions.ISharePrxHolder ITimelineHolder ITimelinePrxHelper Provides type-specific helper functions.ITimelinePrxHolder ITypesHolder ITypesPrxHelper Provides type-specific helper functions.ITypesPrxHolder IUpdateHolder IUpdatePrxHelper Provides type-specific helper functions.IUpdatePrxHolder JobHandleHolder JobHandlePrxHelper Provides type-specific helper functions.JobHandlePrxHolder LogicalChannelListHelper LogicalChannelListHolder LongAnnotationListMapHelper LongAnnotationListMapHolder LongArrayArrayHelper LongArrayArrayHolder LongArrayHelper LongArrayHolder LongByteArrayMapHelper LongByteArrayMapHolder LongIntMapHelper LongIntMapHolder LongIObjectListMapHelper LongIObjectListMapHolder LongListHelper LongListHolder LongPair LongPairHolder LongPairIntMapHelper LongPairIntMapHolder LongPairLongMapHelper LongPairLongMapHolder LongPairToStringIntMapHelper LongPairToStringIntMapHolder LongPairToStringLongMapHelper LongPairToStringLongMapHolder LongPixelsMapHelper LongPixelsMapHolder LongRoiResultMapHelper LongRoiResultMapHolder LongShapeListMapHelper LongShapeListMapHolder LongStringMapHelper LongStringMapHolder MetadataStoreHolder MetadataStorePrxHelper Provides type-specific helper functions.MetadataStorePrxHolder NamedValueListHelper NamedValueListHolder OriginalFileListHelper OriginalFileListHolder OriginalFileMapHelper OriginalFileMapHolder PixelsListHelper PixelsListHolder PixelsTypeListHelper PixelsTypeListHolder ProjectListHelper ProjectListHolder PyramidServiceHolder PyramidServicePrxHelper Provides type-specific helper functions.PyramidServicePrxHolder RawFileStoreHolder RawFileStorePrxHelper Provides type-specific helper functions.RawFileStorePrxHolder RawPixelsStoreHolder RawPixelsStorePrxHelper Provides type-specific helper functions.RawPixelsStorePrxHolder RenderingEngineHolder RenderingEnginePrxHelper Provides type-specific helper functions.RenderingEnginePrxHolder ResolutionDescription ResolutionDescriptionHolder ResolutionDescriptionPrxHelper Provides type-specific helper functions.ResolutionDescriptionPrxHolder ResolutionDescriptionsHelper ResolutionDescriptionsHolder RoiListHelper RoiListHolder RoiOptions Specifies filters used when querying the ROIs.RoiOptionsHolder RoiOptionsPrxHelper Provides type-specific helper functions.RoiOptionsPrxHolder RoiResult Returned by most search methods.RoiResultHolder RoiResultPrxHelper Provides type-specific helper functions.RoiResultPrxHolder RoiStats Container for ShapeStats, one with the combined values, and one per shape.RoiStatsHolder RoiStatsPrxHelper Provides type-specific helper functions.RoiStatsPrxHolder RTypeDictArrayHelper RTypeDictArrayHolder Save SaveHolder SavePrxHelper Provides type-specific helper functions.SavePrxHolder SaveRsp SaveRspHolder SaveRspPrxHelper Provides type-specific helper functions.SaveRspPrxHolder ScriptJobListHelper ScriptJobListHolder SearchHolder SearchMetadataHelper SearchMetadataHolder SearchMetadataListHelper SearchMetadataListHolder SearchPrxHelper Provides type-specific helper functions.SearchPrxHolder ServiceFactoryHolder ServiceFactoryPrxHelper Provides type-specific helper functions.ServiceFactoryPrxHolder ServiceInterfaceHolder ServiceInterfacePrxHelper Provides type-specific helper functions.ServiceInterfacePrxHolder ServiceListHelper ServiceListHolder SessionListHelper SessionListHolder ShapeListHelper ShapeListHolder ShapePoints Contains a discrete representation of the geometry of an omero::model::Shape.ShapePointsHolder ShapePointsPrxHelper Provides type-specific helper functions.ShapePointsPrxHolder ShapeStats Contains arrays, one entry per channel, of the statistics for a given shape.ShapeStatsHolder ShapeStatsListHelper ShapeStatsListHolder ShapeStatsPrxHelper Provides type-specific helper functions.ShapeStatsPrxHolder ShortArrayArrayHelper ShortArrayArrayHolder ShortArrayHelper ShortArrayHolder StatefulServiceInterfaceHolder StatefulServiceInterfacePrxHelper Provides type-specific helper functions.StatefulServiceInterfacePrxHolder StringArrayArrayHelper StringArrayArrayHolder StringArrayHelper StringArrayHolder StringIntMapHelper StringIntMapHolder StringLongListMapHelper StringLongListMapHolder StringLongMapHelper StringLongMapHolder StringRStringMapHelper StringRStringMapHolder StringRTypeMapHelper StringRTypeMapHolder StringSetHelper StringSetHolder StringShapeListMapHelper StringShapeListMapHolder StringStringArrayMapHelper StringStringArrayMapHolder StringStringMapHelper StringStringMapHolder ThumbnailStoreHolder ThumbnailStorePrxHelper Provides type-specific helper functions.ThumbnailStorePrxHolder UserMapHelper UserMapHolder