Package omero.api
Interface IProjectionPrx
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- All Superinterfaces:
Ice.ObjectPrx,ServiceInterfacePrx
- All Known Implementing Classes:
IProjectionPrxHelper
public interface IProjectionPrx extends ServiceInterfacePrx
Provides methods for performing projections of Pixels sets.
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, Ice.Callback __cb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, IceInternal.Functional_LongCallback __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, IceInternal.Functional_LongCallback __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb, IceInternal.Functional_BoolCallback __sentCb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx, Ice.Callback __cb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx, IceInternal.Functional_LongCallback __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx, IceInternal.Functional_LongCallback __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb, IceInternal.Functional_BoolCallback __sentCb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx, Callback_IProjection_projectPixels __cb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, Callback_IProjection_projectPixels __cb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, Ice.Callback __cb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, IceInternal.Functional_GenericCallback1<byte[]> __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, IceInternal.Functional_GenericCallback1<byte[]> __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb, IceInternal.Functional_BoolCallback __sentCb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx, Ice.Callback __cb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx, IceInternal.Functional_GenericCallback1<byte[]> __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx, IceInternal.Functional_GenericCallback1<byte[]> __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb, IceInternal.Functional_BoolCallback __sentCb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx, Callback_IProjection_projectStack __cb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.Ice.AsyncResultbegin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, Callback_IProjection_projectStack __cb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.longend_projectPixels(Ice.AsyncResult __result)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.byte[]end_projectStack(Ice.AsyncResult __result)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.longprojectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.longprojectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.byte[]projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.byte[]projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.-
Methods inherited from interface Ice.ObjectPrx
begin_ice_flushBatchRequests, begin_ice_flushBatchRequests, begin_ice_flushBatchRequests, begin_ice_flushBatchRequests, begin_ice_getConnection, begin_ice_getConnection, begin_ice_getConnection, begin_ice_getConnection, begin_ice_id, begin_ice_id, begin_ice_id, begin_ice_id, begin_ice_id, begin_ice_id, begin_ice_id, begin_ice_id, begin_ice_id, begin_ice_id, begin_ice_ids, begin_ice_ids, begin_ice_ids, begin_ice_ids, begin_ice_ids, begin_ice_ids, begin_ice_ids, begin_ice_ids, begin_ice_ids, begin_ice_ids, begin_ice_invoke, begin_ice_invoke, begin_ice_invoke, begin_ice_invoke, begin_ice_invoke, begin_ice_invoke, begin_ice_invoke, begin_ice_invoke, begin_ice_invoke, begin_ice_invoke, begin_ice_isA, begin_ice_isA, begin_ice_isA, begin_ice_isA, begin_ice_isA, begin_ice_isA, begin_ice_isA, begin_ice_isA, begin_ice_isA, begin_ice_isA, begin_ice_ping, begin_ice_ping, begin_ice_ping, begin_ice_ping, begin_ice_ping, begin_ice_ping, begin_ice_ping, begin_ice_ping, begin_ice_ping, begin_ice_ping, end_ice_flushBatchRequests, end_ice_getConnection, end_ice_id, end_ice_ids, end_ice_invoke, end_ice_isA, end_ice_ping, equals, ice_adapterId, ice_batchDatagram, ice_batchOneway, ice_collocationOptimized, ice_compress, ice_connectionCached, ice_connectionId, ice_context, ice_datagram, ice_encodingVersion, ice_endpoints, ice_endpointSelection, ice_facet, ice_flushBatchRequests, ice_getAdapterId, ice_getCachedConnection, ice_getCommunicator, ice_getConnection, ice_getConnectionId, ice_getContext, ice_getEncodingVersion, ice_getEndpoints, ice_getEndpointSelection, ice_getFacet, ice_getIdentity, ice_getInvocationTimeout, ice_getLocator, ice_getLocatorCacheTimeout, ice_getRouter, ice_id, ice_id, ice_identity, ice_ids, ice_ids, ice_invocationTimeout, ice_invoke, ice_invoke, ice_isA, ice_isA, ice_isBatchDatagram, ice_isBatchOneway, ice_isCollocationOptimized, ice_isConnectionCached, ice_isDatagram, ice_isOneway, ice_isPreferSecure, ice_isSecure, ice_isTwoway, ice_locator, ice_locatorCacheTimeout, ice_oneway, ice_ping, ice_ping, ice_preferSecure, ice_router, ice_secure, ice_timeout, ice_twoway
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Method Detail
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projectStack
byte[] projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end) throws ServerErrorPerforms a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.pixelsType- The destination Pixels type. Ifnull, the source Pixels set pixels type will be used.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.channelIndex- Index of the channel to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.end- Optical section to finish projecting.- Returns:
- A byte array of projected pixel values whose length
is equal to the Pixels set
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sizeX * sizeY * bytesPerPixelin big-endian format. - Throws:
ValidationException- Where:algorithmis unknowntimepointis out of rangechannelIndexis out of rangestartis out of rangeendis out of rangestartis greater thanend- the Pixels set qualified by
pixelsIdis not locatable.
ServerError- See Also:
projectPixels(long, omero.model.PixelsType, omero.constants.projection.ProjectionType, int, int, java.util.List<java.lang.Integer>, int, int, int, java.lang.String)
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projectStack
byte[] projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx) throws ServerErrorPerforms a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.pixelsType- The destination Pixels type. Ifnull, the source Pixels set pixels type will be used.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.channelIndex- Index of the channel to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.end- Optical section to finish projecting.__ctx- The Context map to send with the invocation.- Returns:
- A byte array of projected pixel values whose length
is equal to the Pixels set
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sizeX * sizeY * bytesPerPixelin big-endian format. - Throws:
ValidationException- Where:algorithmis unknowntimepointis out of rangechannelIndexis out of rangestartis out of rangeendis out of rangestartis greater thanend- the Pixels set qualified by
pixelsIdis not locatable.
ServerError- See Also:
projectPixels(long, omero.model.PixelsType, omero.constants.projection.ProjectionType, int, int, java.util.List<java.lang.Integer>, int, int, int, java.lang.String)
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__ctx- The Context map to send with the invocation.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, Ice.Callback __cb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__cb- The asynchronous callback object.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx, Ice.Callback __cb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__ctx- The Context map to send with the invocation.__cb- The asynchronous callback object.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, Callback_IProjection_projectStack __cb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__cb- The asynchronous callback object.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx, Callback_IProjection_projectStack __cb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__ctx- The Context map to send with the invocation.__cb- The asynchronous callback object.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, IceInternal.Functional_GenericCallback1<byte[]> __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__responseCb- The lambda response callback.__userExceptionCb- The lambda user exception callback.__exceptionCb- The lambda exception callback.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, IceInternal.Functional_GenericCallback1<byte[]> __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb, IceInternal.Functional_BoolCallback __sentCb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__responseCb- The lambda response callback.__userExceptionCb- The lambda user exception callback.__exceptionCb- The lambda exception callback.__sentCb- The lambda sent callback.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx, IceInternal.Functional_GenericCallback1<byte[]> __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__ctx- The Context map to send with the invocation.__responseCb- The lambda response callback.__userExceptionCb- The lambda user exception callback.__exceptionCb- The lambda exception callback.- Returns:
- The asynchronous result object.
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begin_projectStack
Ice.AsyncResult begin_projectStack(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, java.util.Map<java.lang.String,java.lang.String> __ctx, IceInternal.Functional_GenericCallback1<byte[]> __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb, IceInternal.Functional_BoolCallback __sentCb)Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.timepoint- Timepoint to perform the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.start- Optical section to start projecting from.__ctx- The Context map to send with the invocation.__responseCb- The lambda response callback.__userExceptionCb- The lambda user exception callback.__exceptionCb- The lambda exception callback.__sentCb- The lambda sent callback.- Returns:
- The asynchronous result object.
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end_projectStack
byte[] end_projectStack(Ice.AsyncResult __result) throws ServerErrorPerforms a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.- Parameters:
__result- The asynchronous result object.- Returns:
- A byte array of projected pixel values whose length
is equal to the Pixels set
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sizeX * sizeY * bytesPerPixelin big-endian format. - Throws:
ValidationException- Where:algorithmis unknowntimepointis out of rangechannelIndexis out of rangestartis out of rangeendis out of rangestartis greater thanend- the Pixels set qualified by
pixelsIdis not locatable.
ServerError- See Also:
projectPixels(long, omero.model.PixelsType, omero.constants.projection.ProjectionType, int, int, java.util.List<java.lang.Integer>, int, int, int, java.lang.String)
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projectPixels
long projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name) throws ServerErrorPerforms a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.pixelsType- The destination Pixels type. Ifnull, the source Pixels set pixels type will be used.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.tEnd- Timepoint to finish projecting.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.zEnd- Optical section to finish projecting.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.- Returns:
- The Id of the newly created Image which has been projected.
- Throws:
ValidationException- Where:algorithmis unknowntStartis out of rangetEndis out of rangetStartis greater thantEndchannelListis null or has indexes out of rangezStartis out of rangezEndis out of rangezStartis greater thanzEnd- the Pixels set qualified by
pixelsIdis not locatable.
ServerError- See Also:
projectStack(long, omero.model.PixelsType, omero.constants.projection.ProjectionType, int, int, int, int, int)
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projectPixels
long projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx) throws ServerErrorPerforms a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.pixelsType- The destination Pixels type. Ifnull, the source Pixels set pixels type will be used.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.tEnd- Timepoint to finish projecting.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.zEnd- Optical section to finish projecting.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__ctx- The Context map to send with the invocation.- Returns:
- The Id of the newly created Image which has been projected.
- Throws:
ValidationException- Where:algorithmis unknowntStartis out of rangetEndis out of rangetStartis greater thantEndchannelListis null or has indexes out of rangezStartis out of rangezEndis out of rangezStartis greater thanzEnd- the Pixels set qualified by
pixelsIdis not locatable.
ServerError- See Also:
projectStack(long, omero.model.PixelsType, omero.constants.projection.ProjectionType, int, int, int, int, int)
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__ctx- The Context map to send with the invocation.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, Ice.Callback __cb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__cb- The asynchronous callback object.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx, Ice.Callback __cb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__ctx- The Context map to send with the invocation.__cb- The asynchronous callback object.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, Callback_IProjection_projectPixels __cb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__cb- The asynchronous callback object.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx, Callback_IProjection_projectPixels __cb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__ctx- The Context map to send with the invocation.__cb- The asynchronous callback object.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, IceInternal.Functional_LongCallback __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__responseCb- The lambda response callback.__userExceptionCb- The lambda user exception callback.__exceptionCb- The lambda exception callback.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, IceInternal.Functional_LongCallback __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb, IceInternal.Functional_BoolCallback __sentCb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__responseCb- The lambda response callback.__userExceptionCb- The lambda user exception callback.__exceptionCb- The lambda exception callback.__sentCb- The lambda sent callback.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx, IceInternal.Functional_LongCallback __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__ctx- The Context map to send with the invocation.__responseCb- The lambda response callback.__userExceptionCb- The lambda user exception callback.__exceptionCb- The lambda exception callback.- Returns:
- The asynchronous result object.
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begin_projectPixels
Ice.AsyncResult begin_projectPixels(long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, java.util.Map<java.lang.String,java.lang.String> __ctx, IceInternal.Functional_LongCallback __responseCb, IceInternal.Functional_GenericCallback1<Ice.UserException> __userExceptionCb, IceInternal.Functional_GenericCallback1<Ice.Exception> __exceptionCb, IceInternal.Functional_BoolCallback __sentCb)Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
pixelsId- The source Pixels set Id.algorithm-MAXIMUM_INTENSITY,MEAN_INTENSITYorSUM_INTENSITY. NOTE: When performing aSUM_INTENSITYprojection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.tStart- Timepoint to start projecting from.channelList- List of the channel indexes to use while calculating the projection.stepping- Stepping value to use while calculating the projection. For example,stepping=1will use every optical section fromstarttoendwherestepping=2will use every other section fromstarttoendto perform the projection.zStart- Optical section to start projecting from.name- Name for the newly created image. Ifnullthe name of the Image linked to the Pixels qualified bypixelsIdwill be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.__ctx- The Context map to send with the invocation.__responseCb- The lambda response callback.__userExceptionCb- The lambda user exception callback.__exceptionCb- The lambda exception callback.__sentCb- The lambda sent callback.- Returns:
- The asynchronous result object.
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end_projectPixels
long end_projectPixels(Ice.AsyncResult __result) throws ServerErrorPerforms a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied usingomero.api.IPixels.copyAndResizeImage.- Parameters:
__result- The asynchronous result object.- Returns:
- The Id of the newly created Image which has been projected.
- Throws:
ValidationException- Where:algorithmis unknowntStartis out of rangetEndis out of rangetStartis greater thantEndchannelListis null or has indexes out of rangezStartis out of rangezEndis out of rangezStartis greater thanzEnd- the Pixels set qualified by
pixelsIdis not locatable.
ServerError- See Also:
projectStack(long, omero.model.PixelsType, omero.constants.projection.ProjectionType, int, int, int, int, int)
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