A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _

A

a00 - Variable in class ome.model.roi.AffineTransform

A00 - Static variable in class ome.model.roi.AffineTransform

a01 - Variable in class ome.model.roi.AffineTransform

A01 - Static variable in class ome.model.roi.AffineTransform

a02 - Variable in class ome.model.roi.AffineTransform

A02 - Static variable in class ome.model.roi.AffineTransform

a10 - Variable in class ome.model.roi.AffineTransform

A10 - Static variable in class ome.model.roi.AffineTransform

a11 - Variable in class ome.model.roi.AffineTransform

A11 - Static variable in class ome.model.roi.AffineTransform

a12 - Variable in class ome.model.roi.AffineTransform

A12 - Static variable in class ome.model.roi.AffineTransform

acceptFilter(Filter) - Method in class ome.model.acquisition.Arc

acceptFilter(Filter) - Method in class ome.model.acquisition.Detector

acceptFilter(Filter) - Method in class ome.model.acquisition.DetectorSettings

acceptFilter(Filter) - Method in class ome.model.acquisition.Dichroic

acceptFilter(Filter) - Method in class ome.model.acquisition.Filament

acceptFilter(Filter) - Method in class ome.model.acquisition.Filter

acceptFilter(Filter) - Method in class ome.model.acquisition.FilterSet

acceptFilter(Filter) - Method in class ome.model.acquisition.FilterSetEmissionFilterLink

acceptFilter(Filter) - Method in class ome.model.acquisition.FilterSetExcitationFilterLink

acceptFilter(Filter) - Method in class ome.model.acquisition.GenericExcitationSource

acceptFilter(Filter) - Method in class ome.model.acquisition.ImagingEnvironment

acceptFilter(Filter) - Method in class ome.model.acquisition.Instrument

acceptFilter(Filter) - Method in class ome.model.acquisition.Laser

acceptFilter(Filter) - Method in class ome.model.acquisition.LightEmittingDiode

acceptFilter(Filter) - Method in class ome.model.acquisition.LightPath

acceptFilter(Filter) - Method in class ome.model.acquisition.LightPathEmissionFilterLink

acceptFilter(Filter) - Method in class ome.model.acquisition.LightPathExcitationFilterLink

acceptFilter(Filter) - Method in class ome.model.acquisition.LightSettings

acceptFilter(Filter) - Method in class ome.model.acquisition.LightSource

acceptFilter(Filter) - Method in class ome.model.acquisition.Microscope

acceptFilter(Filter) - Method in class ome.model.acquisition.Objective

acceptFilter(Filter) - Method in class ome.model.acquisition.ObjectiveSettings

acceptFilter(Filter) - Method in class ome.model.acquisition.OTF

acceptFilter(Filter) - Method in class ome.model.acquisition.StageLabel

acceptFilter(Filter) - Method in class ome.model.acquisition.TransmittanceRange

acceptFilter(Filter) - Method in class ome.model.annotations.Annotation

acceptFilter(Filter) - Method in class ome.model.annotations.AnnotationAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.BasicAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.BooleanAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.ChannelAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.CommentAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.DatasetAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.DetectorAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.DichroicAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.DoubleAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.ExperimenterAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.FileAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.FilesetAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.FilterAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.FolderAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.ImageAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.InstrumentAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.LightPathAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.LightSourceAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.ListAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.LongAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.MapAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.NamespaceAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.NodeAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.NumericAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.ObjectiveAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.OriginalFileAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.PlaneInfoAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.PlateAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.ProjectAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.ReagentAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.RoiAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.ScreenAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.SessionAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.ShapeAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.TagAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.TermAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.TextAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.TimestampAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.TypeAnnotation

acceptFilter(Filter) - Method in class ome.model.annotations.WellAnnotationLink

acceptFilter(Filter) - Method in class ome.model.annotations.XmlAnnotation

acceptFilter(Filter) - Method in class ome.model.containers.Dataset

acceptFilter(Filter) - Method in class ome.model.containers.DatasetImageLink

acceptFilter(Filter) - Method in class ome.model.containers.Folder

acceptFilter(Filter) - Method in class ome.model.containers.FolderImageLink

acceptFilter(Filter) - Method in class ome.model.containers.FolderRoiLink

acceptFilter(Filter) - Method in class ome.model.containers.Project

acceptFilter(Filter) - Method in class ome.model.containers.ProjectDatasetLink

acceptFilter(Filter) - Method in class ome.model.core.Channel

acceptFilter(Filter) - Method in class ome.model.core.Image

acceptFilter(Filter) - Method in class ome.model.core.LogicalChannel

acceptFilter(Filter) - Method in class ome.model.core.OriginalFile

acceptFilter(Filter) - Method in class ome.model.core.Pixels

acceptFilter(Filter) - Method in class ome.model.core.PixelsOriginalFileMap

acceptFilter(Filter) - Method in class ome.model.core.PlaneInfo

acceptFilter(Filter) - Method in class ome.model.display.ChannelBinding

acceptFilter(Filter) - Method in class ome.model.display.CodomainMapContext

acceptFilter(Filter) - Method in class ome.model.display.ContrastStretchingContext

acceptFilter(Filter) - Method in class ome.model.display.PlaneSlicingContext

acceptFilter(Filter) - Method in class ome.model.display.ProjectionDef

acceptFilter(Filter) - Method in class ome.model.display.QuantumDef

acceptFilter(Filter) - Method in class ome.model.display.RenderingDef

acceptFilter(Filter) - Method in class ome.model.display.ReverseIntensityContext

acceptFilter(Filter) - Method in class ome.model.display.Thumbnail

acceptFilter(Filter) - Method in class ome.model.enums.AcquisitionMode

acceptFilter(Filter) - Method in class ome.model.enums.AdminPrivilege

acceptFilter(Filter) - Method in class ome.model.enums.ArcType

acceptFilter(Filter) - Method in class ome.model.enums.Binning

acceptFilter(Filter) - Method in class ome.model.enums.ChecksumAlgorithm

acceptFilter(Filter) - Method in class ome.model.enums.ContrastMethod

acceptFilter(Filter) - Method in class ome.model.enums.Correction

acceptFilter(Filter) - Method in class ome.model.enums.DetectorType

acceptFilter(Filter) - Method in class ome.model.enums.DimensionOrder

acceptFilter(Filter) - Method in class ome.model.enums.EventType

acceptFilter(Filter) - Method in class ome.model.enums.ExperimentType

acceptFilter(Filter) - Method in class ome.model.enums.Family

acceptFilter(Filter) - Method in class ome.model.enums.FilamentType

acceptFilter(Filter) - Method in class ome.model.enums.FilterType

acceptFilter(Filter) - Method in class ome.model.enums.Format

acceptFilter(Filter) - Method in class ome.model.enums.Illumination

acceptFilter(Filter) - Method in class ome.model.enums.Immersion

acceptFilter(Filter) - Method in class ome.model.enums.LaserMedium

acceptFilter(Filter) - Method in class ome.model.enums.LaserType

acceptFilter(Filter) - Method in class ome.model.enums.Medium

acceptFilter(Filter) - Method in class ome.model.enums.MicrobeamManipulationType

acceptFilter(Filter) - Method in class ome.model.enums.MicroscopeType

acceptFilter(Filter) - Method in class ome.model.enums.PhotometricInterpretation

acceptFilter(Filter) - Method in class ome.model.enums.PixelsType

acceptFilter(Filter) - Method in class ome.model.enums.ProjectionAxis

acceptFilter(Filter) - Method in class ome.model.enums.ProjectionType

acceptFilter(Filter) - Method in class ome.model.enums.Pulse

acceptFilter(Filter) - Method in class ome.model.enums.RenderingModel

acceptFilter(Filter) - Method in class ome.model.experiment.Experiment

acceptFilter(Filter) - Method in class ome.model.experiment.MicrobeamManipulation

acceptFilter(Filter) - Method in class ome.model.fs.Fileset

acceptFilter(Filter) - Method in class ome.model.fs.FilesetEntry

acceptFilter(Filter) - Method in class ome.model.fs.FilesetJobLink

acceptFilter(Filter) - Method in class ome.model.internal.Details

acceptFilter(Filter) - Method in class ome.model.internal.Link

acceptFilter(Filter) - Method in class ome.model.jobs.ImportJob

Deprecated.

acceptFilter(Filter) - Method in class ome.model.jobs.IndexingJob

acceptFilter(Filter) - Method in class ome.model.jobs.IntegrityCheckJob

acceptFilter(Filter) - Method in class ome.model.jobs.Job

acceptFilter(Filter) - Method in class ome.model.jobs.JobOriginalFileLink

acceptFilter(Filter) - Method in class ome.model.jobs.JobStatus

acceptFilter(Filter) - Method in class ome.model.jobs.MetadataImportJob

acceptFilter(Filter) - Method in class ome.model.jobs.ParseJob

acceptFilter(Filter) - Method in class ome.model.jobs.PixelDataJob

acceptFilter(Filter) - Method in class ome.model.jobs.ScriptJob

acceptFilter(Filter) - Method in class ome.model.jobs.ThumbnailGenerationJob

acceptFilter(Filter) - Method in class ome.model.jobs.UploadJob

acceptFilter(Filter) - Method in class ome.model.meta.DBPatch

acceptFilter(Filter) - Method in class ome.model.meta.Event

acceptFilter(Filter) - Method in class ome.model.meta.EventLog

acceptFilter(Filter) - Method in class ome.model.meta.Experimenter

acceptFilter(Filter) - Method in class ome.model.meta.ExperimenterGroup

acceptFilter(Filter) - Method in class ome.model.meta.ExternalInfo

acceptFilter(Filter) - Method in class ome.model.meta.GroupExperimenterMap

acceptFilter(Filter) - Method in class ome.model.meta.Namespace

acceptFilter(Filter) - Method in class ome.model.meta.Node

acceptFilter(Filter) - Method in class ome.model.meta.Session

acceptFilter(Filter) - Method in class ome.model.meta.Share

acceptFilter(Filter) - Method in class ome.model.meta.ShareMember

acceptFilter(Filter) - Method in class ome.model.roi.AffineTransform

acceptFilter(Filter) - Method in class ome.model.roi.Ellipse

acceptFilter(Filter) - Method in class ome.model.roi.Label

acceptFilter(Filter) - Method in class ome.model.roi.Line

acceptFilter(Filter) - Method in class ome.model.roi.Mask

acceptFilter(Filter) - Method in class ome.model.roi.Path

Deprecated.

acceptFilter(Filter) - Method in class ome.model.roi.Point

acceptFilter(Filter) - Method in class ome.model.roi.Polygon

acceptFilter(Filter) - Method in class ome.model.roi.Polyline

acceptFilter(Filter) - Method in class ome.model.roi.Rectangle

acceptFilter(Filter) - Method in class ome.model.roi.Roi

acceptFilter(Filter) - Method in class ome.model.roi.Shape

acceptFilter(Filter) - Method in class ome.model.screen.Plate

acceptFilter(Filter) - Method in class ome.model.screen.PlateAcquisition

acceptFilter(Filter) - Method in class ome.model.screen.Reagent

acceptFilter(Filter) - Method in class ome.model.screen.Screen

acceptFilter(Filter) - Method in class ome.model.screen.ScreenPlateLink

acceptFilter(Filter) - Method in class ome.model.screen.Well

acceptFilter(Filter) - Method in class ome.model.screen.WellReagentLink

acceptFilter(Filter) - Method in class ome.model.screen.WellSample

acceptFilter(Filter) - Method in class ome.model.stats.StatsInfo

acceptFilter(Filter) - Method in class ome.model.units.ElectricPotential

acceptFilter(Filter) - Method in class ome.model.units.Frequency

acceptFilter(Filter) - Method in class ome.model.units.Length

acceptFilter(Filter) - Method in class ome.model.units.Power

acceptFilter(Filter) - Method in class ome.model.units.Pressure

acceptFilter(Filter) - Method in class ome.model.units.Temperature

acceptFilter(Filter) - Method in class ome.model.units.Time

acceptFilter(Filter) - Method in interface ome.util.Filterable

acceptFilter(Filter) - Method in class ome.util.PermDetails

ACLCreateViolation - Exception in ome.conditions.acl

User does not have permissions to perform given action.

ACLCreateViolation(Class, Long, String) - Constructor for exception ome.conditions.acl.ACLCreateViolation

ACLDeleteViolation - Exception in ome.conditions.acl

User does not have permissions to perform given action.

ACLDeleteViolation(Class, Long, String) - Constructor for exception ome.conditions.acl.ACLDeleteViolation

ACLLoadViolation - Exception in ome.conditions.acl

User does not have permissions to perform given action.

ACLLoadViolation(Class, Long, String) - Constructor for exception ome.conditions.acl.ACLLoadViolation

ACLUpdateViolation - Exception in ome.conditions.acl

User does not have permissions to perform given action.

ACLUpdateViolation(Class, Long, String) - Constructor for exception ome.conditions.acl.ACLUpdateViolation

ACLViolation - Exception in ome.conditions.acl

User has attempted an action which is not permitted by the Permissions of a given instance.

ACLViolation(Class, Long, String) - Constructor for exception ome.conditions.acl.ACLViolation

acquisitionData - Variable in class ome.parameters.Options

acquisitionDate - Variable in class ome.model.core.Image

ACQUISITIONDATE - Static variable in class ome.model.core.Image

AcquisitionMode - Class in ome.model.enums

AcquisitionMode() - Constructor for class ome.model.enums.AcquisitionMode

AcquisitionMode(Long) - Constructor for class ome.model.enums.AcquisitionMode

AcquisitionMode(Long, boolean) - Constructor for class ome.model.enums.AcquisitionMode

Main constructor.

AcquisitionMode(String) - Constructor for class ome.model.enums.AcquisitionMode

AcquisitionMode.Details - Class in ome.model.enums

action - Variable in class ome.model.meta.EventLog

ACTION - Static variable in class ome.model.meta.EventLog

active - Variable in class ome.model.display.ChannelBinding

ACTIVE - Static variable in class ome.model.display.ChannelBinding

active - Variable in class ome.model.display.ProjectionDef

ACTIVE - Static variable in class ome.model.display.ProjectionDef

active - Variable in class ome.model.meta.Share

ACTIVE - Static variable in class ome.model.meta.Share

activeSession(String) - Method in class ome.util.actions.PostgresSqlAction

activeSession(String) - Method in interface ome.util.SqlAction

Returns whether the given string is the UUID of a session that is currently active.

Add(Conversion...) - Static method in class ome.model.units.Conversion

Static helper for creating Conversion.Add instances.

Add(Conversion[]) - Constructor for class ome.model.units.Conversion.Add

add(QueryParameter) - Method in class ome.parameters.Parameters

add(String) - Method in class ome.parameters.Period

addAlgorithm(String) - Method in class ome.parameters.Parameters

addAll(Parameters) - Method in class ome.parameters.Parameters

adds all the information from the passed in Parameters instance to this instance.

addAll(QueryParameter[]) - Method in class ome.parameters.Parameters

adds all the information from the passed in Parameters instance to this instance.

addAnnotationAnnotationLink(AnnotationAnnotationLink) - Method in class ome.model.annotations.Annotation

use instead of setAnnotationLinks .

addAnnotationAnnotationLink(AnnotationAnnotationLink, boolean) - Method in class ome.model.annotations.Annotation

Adds a ome.model.annotations.AnnotationAnnotationLink to annotationLinks, allowing for recursion -- whether or not addAnnotationAnnotationLink will be called on the addition if it is loaded

addAnnotationAnnotationLinkSet(Collection<AnnotationAnnotationLink>) - Method in class ome.model.annotations.Annotation

use like addAnnotationAnnotationLink.

addBoolean(String, Boolean) - Method in class ome.parameters.Parameters

addChannel(Channel) - Method in class ome.model.core.LogicalChannel

use instead of setChannels .

addChannel(Channel) - Method in class ome.model.core.Pixels

use instead of setChannels .

addChannelAnnotationLink(ChannelAnnotationLink) - Method in class ome.model.core.Channel

use instead of setAnnotationLinks .

addChannelAnnotationLink(ChannelAnnotationLink, boolean) - Method in class ome.model.core.Channel

Adds a ome.model.annotations.ChannelAnnotationLink to annotationLinks, allowing for recursion -- whether or not addChannelAnnotationLink will be called on the addition if it is loaded

addChannelAnnotationLinkSet(Collection<ChannelAnnotationLink>) - Method in class ome.model.core.Channel

use like addChannelAnnotationLink.

addChannelBinding(ChannelBinding) - Method in class ome.model.display.RenderingDef

use instead of setWaveRendering .

addChannelBindingSet(Collection<ChannelBinding>) - Method in class ome.model.display.RenderingDef

use like addChannelBinding.

addChannelSet(Collection<Channel>) - Method in class ome.model.core.LogicalChannel

use like addChannel.

addChannelSet(Collection<Channel>) - Method in class ome.model.core.Pixels

use like addChannel.

addChildFolders(Folder) - Method in class ome.model.containers.Folder

use instead of setChildFolders .

addChildFoldersSet(Collection<Folder>) - Method in class ome.model.containers.Folder

use like addFolder.

addClass(Class) - Method in class ome.parameters.Parameters

addClass(String, Class) - Method in class ome.parameters.Parameters

addCodomainMapContext(CodomainMapContext) - Method in class ome.model.display.ChannelBinding

use instead of setSpatialDomainEnhancement .

addCodomainMapContextSet(Collection<CodomainMapContext>) - Method in class ome.model.display.ChannelBinding

use like addCodomainMapContext.

addDatasetAnnotationLink(DatasetAnnotationLink) - Method in class ome.model.containers.Dataset

use instead of setAnnotationLinks .

addDatasetAnnotationLink(DatasetAnnotationLink, boolean) - Method in class ome.model.containers.Dataset

Adds a ome.model.annotations.DatasetAnnotationLink to annotationLinks, allowing for recursion -- whether or not addDatasetAnnotationLink will be called on the addition if it is loaded

addDatasetAnnotationLinkSet(Collection<DatasetAnnotationLink>) - Method in class ome.model.containers.Dataset

use like addDatasetAnnotationLink.

addDatasetImageLink(DatasetImageLink) - Method in class ome.model.containers.Dataset

use instead of setImageLinks .

addDatasetImageLink(DatasetImageLink, boolean) - Method in class ome.model.containers.Dataset

Adds a ome.model.containers.DatasetImageLink to imageLinks, allowing for recursion -- whether or not addDatasetImageLink will be called on the addition if it is loaded

addDatasetImageLink(DatasetImageLink) - Method in class ome.model.core.Image

use instead of setDatasetLinks .

addDatasetImageLink(DatasetImageLink, boolean) - Method in class ome.model.core.Image

Adds a ome.model.containers.DatasetImageLink to datasetLinks, allowing for recursion -- whether or not addDatasetImageLink will be called on the addition if it is loaded

addDatasetImageLinkSet(Collection<DatasetImageLink>) - Method in class ome.model.containers.Dataset

use like addDatasetImageLink.

addDatasetImageLinkSet(Collection<DatasetImageLink>) - Method in class ome.model.core.Image

use like addDatasetImageLink.

addDetector(Detector) - Method in class ome.model.acquisition.Instrument

use instead of setDetector .

addDetectorAnnotationLink(DetectorAnnotationLink) - Method in class ome.model.acquisition.Detector

use instead of setAnnotationLinks .

addDetectorAnnotationLink(DetectorAnnotationLink, boolean) - Method in class ome.model.acquisition.Detector

Adds a ome.model.annotations.DetectorAnnotationLink to annotationLinks, allowing for recursion -- whether or not addDetectorAnnotationLink will be called on the addition if it is loaded

addDetectorAnnotationLinkSet(Collection<DetectorAnnotationLink>) - Method in class ome.model.acquisition.Detector

use like addDetectorAnnotationLink.

addDetectorSet(Collection<Detector>) - Method in class ome.model.acquisition.Instrument

use like addDetector.

addDichroic(Dichroic) - Method in class ome.model.acquisition.Instrument

use instead of setDichroic .

addDichroicAnnotationLink(DichroicAnnotationLink) - Method in class ome.model.acquisition.Dichroic

use instead of setAnnotationLinks .

addDichroicAnnotationLink(DichroicAnnotationLink, boolean) - Method in class ome.model.acquisition.Dichroic

Adds a ome.model.annotations.DichroicAnnotationLink to annotationLinks, allowing for recursion -- whether or not addDichroicAnnotationLink will be called on the addition if it is loaded

addDichroicAnnotationLinkSet(Collection<DichroicAnnotationLink>) - Method in class ome.model.acquisition.Dichroic

use like addDichroicAnnotationLink.

addDichroicSet(Collection<Dichroic>) - Method in class ome.model.acquisition.Instrument

use like addDichroic.

addEvent(Event) - Method in class ome.model.meta.Session

use instead of setEvents .

addEventLog(EventLog) - Method in class ome.model.meta.Event

use instead of setLogs .

addEventLogSet(Collection<EventLog>) - Method in class ome.model.meta.Event

use like addEventLog.

addEventSet(Collection<Event>) - Method in class ome.model.meta.Session

use like addEvent.

addExperimenterAnnotationLink(ExperimenterAnnotationLink) - Method in class ome.model.meta.Experimenter

use instead of setAnnotationLinks .

addExperimenterAnnotationLink(ExperimenterAnnotationLink, boolean) - Method in class ome.model.meta.Experimenter

Adds a ome.model.annotations.ExperimenterAnnotationLink to annotationLinks, allowing for recursion -- whether or not addExperimenterAnnotationLink will be called on the addition if it is loaded

addExperimenterAnnotationLinkSet(Collection<ExperimenterAnnotationLink>) - Method in class ome.model.meta.Experimenter

use like addExperimenterAnnotationLink.

addExperimenterGroupAnnotationLink(ExperimenterGroupAnnotationLink) - Method in class ome.model.meta.ExperimenterGroup

use instead of setAnnotationLinks .

addExperimenterGroupAnnotationLink(ExperimenterGroupAnnotationLink, boolean) - Method in class ome.model.meta.ExperimenterGroup

Adds a ome.model.annotations.ExperimenterGroupAnnotationLink to annotationLinks, allowing for recursion -- whether or not addExperimenterGroupAnnotationLink will be called on the addition if it is loaded

addExperimenterGroupAnnotationLinkSet(Collection<ExperimenterGroupAnnotationLink>) - Method in class ome.model.meta.ExperimenterGroup

use like addExperimenterGroupAnnotationLink.

addExtendedRestrictions(Set<String>) - Method in class ome.model.internal.Permissions

addFilesetAnnotationLink(FilesetAnnotationLink) - Method in class ome.model.fs.Fileset

use instead of setAnnotationLinks .

addFilesetAnnotationLink(FilesetAnnotationLink, boolean) - Method in class ome.model.fs.Fileset

Adds a ome.model.annotations.FilesetAnnotationLink to annotationLinks, allowing for recursion -- whether or not addFilesetAnnotationLink will be called on the addition if it is loaded

addFilesetAnnotationLinkSet(Collection<FilesetAnnotationLink>) - Method in class ome.model.fs.Fileset

use like addFilesetAnnotationLink.

addFilesetEntry(FilesetEntry) - Method in class ome.model.core.OriginalFile

use instead of setFilesetEntries .

addFilesetEntry(FilesetEntry) - Method in class ome.model.fs.Fileset

use instead of setUsedFiles .

addFilesetEntrySet(Collection<FilesetEntry>) - Method in class ome.model.core.OriginalFile

use like addFilesetEntry.

addFilesetEntrySet(Collection<FilesetEntry>) - Method in class ome.model.fs.Fileset

use like addFilesetEntry.

addFilesetJobLink(FilesetJobLink) - Method in class ome.model.fs.Fileset

use instead of setJobLinks .

addFilesetJobLink(FilesetJobLink, boolean) - Method in class ome.model.fs.Fileset

Adds a ome.model.fs.FilesetJobLink to jobLinks, allowing for recursion -- whether or not addFilesetJobLink will be called on the addition if it is loaded

addFilesetJobLinkSet(Collection<FilesetJobLink>) - Method in class ome.model.fs.Fileset

use like addFilesetJobLink.

addFilter(Filter) - Method in class ome.model.acquisition.Instrument

use instead of setFilter .

addFilterAnnotationLink(FilterAnnotationLink) - Method in class ome.model.acquisition.Filter

use instead of setAnnotationLinks .

addFilterAnnotationLink(FilterAnnotationLink, boolean) - Method in class ome.model.acquisition.Filter

Adds a ome.model.annotations.FilterAnnotationLink to annotationLinks, allowing for recursion -- whether or not addFilterAnnotationLink will be called on the addition if it is loaded

addFilterAnnotationLinkSet(Collection<FilterAnnotationLink>) - Method in class ome.model.acquisition.Filter

use like addFilterAnnotationLink.

addFiltered(String) - Method in class ome.model.internal.Details

consider the collection named by collectionName to be a "filtered" representation of the DB.

addFiltered(Collection<String>) - Method in class ome.model.internal.Details

consider all the collections named by the elements of collection to be a "filtered" representation of the DB.

addFilterSet(Collection<Filter>) - Method in class ome.model.acquisition.Instrument

use like addFilter.

addFilterSet(FilterSet) - Method in class ome.model.acquisition.Instrument

use instead of setFilterSet .

addFilterSetEmissionFilterLink(FilterSetEmissionFilterLink) - Method in class ome.model.acquisition.Filter

use instead of setEmissionFilterLink .

addFilterSetEmissionFilterLink(FilterSetEmissionFilterLink, boolean) - Method in class ome.model.acquisition.Filter

Adds a ome.model.acquisition.FilterSetEmissionFilterLink to emissionFilterLink, allowing for recursion -- whether or not addFilterSetEmissionFilterLink will be called on the addition if it is loaded

addFilterSetEmissionFilterLink(FilterSetEmissionFilterLink) - Method in class ome.model.acquisition.FilterSet

use instead of setEmissionFilterLink .

addFilterSetEmissionFilterLink(FilterSetEmissionFilterLink, boolean) - Method in class ome.model.acquisition.FilterSet

Adds a ome.model.acquisition.FilterSetEmissionFilterLink to emissionFilterLink, allowing for recursion -- whether or not addFilterSetEmissionFilterLink will be called on the addition if it is loaded

addFilterSetEmissionFilterLinkSet(Collection<FilterSetEmissionFilterLink>) - Method in class ome.model.acquisition.Filter

use like addFilterSetEmissionFilterLink.

addFilterSetEmissionFilterLinkSet(Collection<FilterSetEmissionFilterLink>) - Method in class ome.model.acquisition.FilterSet

use like addFilterSetEmissionFilterLink.

addFilterSetExcitationFilterLink(FilterSetExcitationFilterLink) - Method in class ome.model.acquisition.Filter

use instead of setExcitationFilterLink .

addFilterSetExcitationFilterLink(FilterSetExcitationFilterLink, boolean) - Method in class ome.model.acquisition.Filter

Adds a ome.model.acquisition.FilterSetExcitationFilterLink to excitationFilterLink, allowing for recursion -- whether or not addFilterSetExcitationFilterLink will be called on the addition if it is loaded

addFilterSetExcitationFilterLink(FilterSetExcitationFilterLink) - Method in class ome.model.acquisition.FilterSet

use instead of setExcitationFilterLink .

addFilterSetExcitationFilterLink(FilterSetExcitationFilterLink, boolean) - Method in class ome.model.acquisition.FilterSet

Adds a ome.model.acquisition.FilterSetExcitationFilterLink to excitationFilterLink, allowing for recursion -- whether or not addFilterSetExcitationFilterLink will be called on the addition if it is loaded

addFilterSetExcitationFilterLinkSet(Collection<FilterSetExcitationFilterLink>) - Method in class ome.model.acquisition.Filter

use like addFilterSetExcitationFilterLink.

addFilterSetExcitationFilterLinkSet(Collection<FilterSetExcitationFilterLink>) - Method in class ome.model.acquisition.FilterSet

use like addFilterSetExcitationFilterLink.

addFilterSetSet(Collection<FilterSet>) - Method in class ome.model.acquisition.Instrument

use like addFilterSet.

addFolderAnnotationLink(FolderAnnotationLink) - Method in class ome.model.containers.Folder

use instead of setAnnotationLinks .

addFolderAnnotationLink(FolderAnnotationLink, boolean) - Method in class ome.model.containers.Folder

Adds a ome.model.annotations.FolderAnnotationLink to annotationLinks, allowing for recursion -- whether or not addFolderAnnotationLink will be called on the addition if it is loaded

addFolderAnnotationLinkSet(Collection<FolderAnnotationLink>) - Method in class ome.model.containers.Folder

use like addFolderAnnotationLink.

addFolderImageLink(FolderImageLink) - Method in class ome.model.containers.Folder

use instead of setImageLinks .

addFolderImageLink(FolderImageLink, boolean) - Method in class ome.model.containers.Folder

Adds a ome.model.containers.FolderImageLink to imageLinks, allowing for recursion -- whether or not addFolderImageLink will be called on the addition if it is loaded

addFolderImageLink(FolderImageLink) - Method in class ome.model.core.Image

use instead of setFolderLinks .

addFolderImageLink(FolderImageLink, boolean) - Method in class ome.model.core.Image

Adds a ome.model.containers.FolderImageLink to folderLinks, allowing for recursion -- whether or not addFolderImageLink will be called on the addition if it is loaded

addFolderImageLinkSet(Collection<FolderImageLink>) - Method in class ome.model.containers.Folder

use like addFolderImageLink.

addFolderImageLinkSet(Collection<FolderImageLink>) - Method in class ome.model.core.Image

use like addFolderImageLink.

addFolderRoiLink(FolderRoiLink) - Method in class ome.model.containers.Folder

use instead of setRoiLinks .

addFolderRoiLink(FolderRoiLink, boolean) - Method in class ome.model.containers.Folder

Adds a ome.model.containers.FolderRoiLink to roiLinks, allowing for recursion -- whether or not addFolderRoiLink will be called on the addition if it is loaded

addFolderRoiLink(FolderRoiLink) - Method in class ome.model.roi.Roi

use instead of setFolderLinks .

addFolderRoiLink(FolderRoiLink, boolean) - Method in class ome.model.roi.Roi

Adds a ome.model.containers.FolderRoiLink to folderLinks, allowing for recursion -- whether or not addFolderRoiLink will be called on the addition if it is loaded

addFolderRoiLinkSet(Collection<FolderRoiLink>) - Method in class ome.model.containers.Folder

use like addFolderRoiLink.

addFolderRoiLinkSet(Collection<FolderRoiLink>) - Method in class ome.model.roi.Roi

use like addFolderRoiLink.

addGroupExperimenterMap(GroupExperimenterMap) - Method in class ome.model.meta.Experimenter

use instead of setGroupExperimenterMap .

addGroupExperimenterMap(GroupExperimenterMap, boolean) - Method in class ome.model.meta.Experimenter

Adds a ome.model.meta.GroupExperimenterMap to groupExperimenterMap, allowing for recursion -- whether or not addGroupExperimenterMap will be called on the addition if it is loaded

addGroupExperimenterMap(GroupExperimenterMap) - Method in class ome.model.meta.ExperimenterGroup

use instead of setGroupExperimenterMap .

addGroupExperimenterMap(GroupExperimenterMap, boolean) - Method in class ome.model.meta.ExperimenterGroup

Adds a ome.model.meta.GroupExperimenterMap to groupExperimenterMap, allowing for recursion -- whether or not addGroupExperimenterMap will be called on the addition if it is loaded

addGroupExperimenterMapSet(Collection<GroupExperimenterMap>) - Method in class ome.model.meta.Experimenter

use like addGroupExperimenterMap.

addGroupExperimenterMapSet(Collection<GroupExperimenterMap>) - Method in class ome.model.meta.ExperimenterGroup

use like addGroupExperimenterMap.

addId(Long) - Method in class ome.parameters.Parameters

addIds(Collection) - Method in class ome.parameters.Parameters

addImage(Image) - Method in class ome.model.fs.Fileset

use instead of setImages .

addImageAnnotationLink(ImageAnnotationLink) - Method in class ome.model.core.Image

use instead of setAnnotationLinks .

addImageAnnotationLink(ImageAnnotationLink, boolean) - Method in class ome.model.core.Image

Adds a ome.model.annotations.ImageAnnotationLink to annotationLinks, allowing for recursion -- whether or not addImageAnnotationLink will be called on the addition if it is loaded

addImageAnnotationLinkSet(Collection<ImageAnnotationLink>) - Method in class ome.model.core.Image

use like addImageAnnotationLink.

addImageSet(Collection<Image>) - Method in class ome.model.fs.Fileset

use like addImage.

addInstrumentAnnotationLink(InstrumentAnnotationLink) - Method in class ome.model.acquisition.Instrument

use instead of setAnnotationLinks .

addInstrumentAnnotationLink(InstrumentAnnotationLink, boolean) - Method in class ome.model.acquisition.Instrument

Adds a ome.model.annotations.InstrumentAnnotationLink to annotationLinks, allowing for recursion -- whether or not addInstrumentAnnotationLink will be called on the addition if it is loaded

addInstrumentAnnotationLinkSet(Collection<InstrumentAnnotationLink>) - Method in class ome.model.acquisition.Instrument

use like addInstrumentAnnotationLink.

addInteger(String, Integer) - Method in class ome.parameters.Parameters

addJobOriginalFileLink(JobOriginalFileLink) - Method in class ome.model.jobs.Job

use instead of setOriginalFileLinks .

addJobOriginalFileLink(JobOriginalFileLink, boolean) - Method in class ome.model.jobs.Job

Adds a ome.model.jobs.JobOriginalFileLink to originalFileLinks, allowing for recursion -- whether or not addJobOriginalFileLink will be called on the addition if it is loaded

addJobOriginalFileLinkSet(Collection<JobOriginalFileLink>) - Method in class ome.model.jobs.Job

use like addJobOriginalFileLink.

addLightPathAnnotationLink(LightPathAnnotationLink) - Method in class ome.model.acquisition.LightPath

use instead of setAnnotationLinks .

addLightPathAnnotationLink(LightPathAnnotationLink, boolean) - Method in class ome.model.acquisition.LightPath

Adds a ome.model.annotations.LightPathAnnotationLink to annotationLinks, allowing for recursion -- whether or not addLightPathAnnotationLink will be called on the addition if it is loaded

addLightPathAnnotationLinkSet(Collection<LightPathAnnotationLink>) - Method in class ome.model.acquisition.LightPath

use like addLightPathAnnotationLink.

addLightPathEmissionFilterLink(LightPathEmissionFilterLink) - Method in class ome.model.acquisition.LightPath

use instead of setEmissionFilterLink .

addLightPathEmissionFilterLink(LightPathEmissionFilterLink, boolean) - Method in class ome.model.acquisition.LightPath

Adds a ome.model.acquisition.LightPathEmissionFilterLink to emissionFilterLink, allowing for recursion -- whether or not addLightPathEmissionFilterLink will be called on the addition if it is loaded

addLightPathEmissionFilterLinkSet(Collection<LightPathEmissionFilterLink>) - Method in class ome.model.acquisition.LightPath

use like addLightPathEmissionFilterLink.

addLightPathExcitationFilterLink(LightPathExcitationFilterLink) - Method in class ome.model.acquisition.LightPath

use instead of setExcitationFilterLink .

addLightPathExcitationFilterLink(LightPathExcitationFilterLink, boolean) - Method in class ome.model.acquisition.LightPath

Adds a ome.model.acquisition.LightPathExcitationFilterLink to excitationFilterLink, allowing for recursion -- whether or not addLightPathExcitationFilterLink will be called on the addition if it is loaded

addLightPathExcitationFilterLinkSet(Collection<LightPathExcitationFilterLink>) - Method in class ome.model.acquisition.LightPath

use like addLightPathExcitationFilterLink.

addLightSettings(LightSettings) - Method in class ome.model.experiment.MicrobeamManipulation

use instead of setLightSourceSettings .

addLightSettingsSet(Collection<LightSettings>) - Method in class ome.model.experiment.MicrobeamManipulation

use like addLightSettings.

addLightSource(LightSource) - Method in class ome.model.acquisition.Instrument

use instead of setLightSource .

addLightSourceAnnotationLink(LightSourceAnnotationLink) - Method in class ome.model.acquisition.LightSource

use instead of setAnnotationLinks .

addLightSourceAnnotationLink(LightSourceAnnotationLink, boolean) - Method in class ome.model.acquisition.LightSource

Adds a ome.model.annotations.LightSourceAnnotationLink to annotationLinks, allowing for recursion -- whether or not addLightSourceAnnotationLink will be called on the addition if it is loaded

addLightSourceAnnotationLinkSet(Collection<LightSourceAnnotationLink>) - Method in class ome.model.acquisition.LightSource

use like addLightSourceAnnotationLink.

addLightSourceSet(Collection<LightSource>) - Method in class ome.model.acquisition.Instrument

use like addLightSource.

addList(String, List) - Method in class ome.parameters.Parameters

addLong(String, Long) - Method in class ome.parameters.Parameters

addMap(String, Map) - Method in class ome.parameters.Parameters

addMessageWithinDbPatchEnd(String, int, String) - Method in interface ome.util.SqlAction

Add a unique message to the DB patch table within the current patch.

addMessageWithinDbPatchEnd(String, int, String) - Method in class ome.util.SqlAction.Impl

addMessageWithinDbPatchStart(String, int, String) - Method in interface ome.util.SqlAction

Add a unique message to the DB patch table within the current patch.

addMessageWithinDbPatchStart(String, int, String) - Method in class ome.util.SqlAction.Impl

addMicrobeamManipulation(MicrobeamManipulation) - Method in class ome.model.experiment.Experiment

use instead of setMicrobeamManipulation .

addMicrobeamManipulationSet(Collection<MicrobeamManipulation>) - Method in class ome.model.experiment.Experiment

use like addMicrobeamManipulation.

addMimetypes(Collection<String>, MapSqlParameterSource) - Method in class ome.util.SqlAction.Impl

Returns the "and_mimetype" clause which must be appended to a given query.

addNamespaceAnnotationLink(NamespaceAnnotationLink) - Method in class ome.model.meta.Namespace

use instead of setAnnotationLinks .

addNamespaceAnnotationLink(NamespaceAnnotationLink, boolean) - Method in class ome.model.meta.Namespace

Adds a ome.model.annotations.NamespaceAnnotationLink to annotationLinks, allowing for recursion -- whether or not addNamespaceAnnotationLink will be called on the addition if it is loaded

addNamespaceAnnotationLinkSet(Collection<NamespaceAnnotationLink>) - Method in class ome.model.meta.Namespace

use like addNamespaceAnnotationLink.

addNodeAnnotationLink(NodeAnnotationLink) - Method in class ome.model.meta.Node

use instead of setAnnotationLinks .

addNodeAnnotationLink(NodeAnnotationLink, boolean) - Method in class ome.model.meta.Node

Adds a ome.model.annotations.NodeAnnotationLink to annotationLinks, allowing for recursion -- whether or not addNodeAnnotationLink will be called on the addition if it is loaded

addNodeAnnotationLinkSet(Collection<NodeAnnotationLink>) - Method in class ome.model.meta.Node

use like addNodeAnnotationLink.

addObjective(Objective) - Method in class ome.model.acquisition.Instrument

use instead of setObjective .

addObjectiveAnnotationLink(ObjectiveAnnotationLink) - Method in class ome.model.acquisition.Objective

use instead of setAnnotationLinks .

addObjectiveAnnotationLink(ObjectiveAnnotationLink, boolean) - Method in class ome.model.acquisition.Objective

Adds a ome.model.annotations.ObjectiveAnnotationLink to annotationLinks, allowing for recursion -- whether or not addObjectiveAnnotationLink will be called on the addition if it is loaded

addObjectiveAnnotationLinkSet(Collection<ObjectiveAnnotationLink>) - Method in class ome.model.acquisition.Objective

use like addObjectiveAnnotationLink.

addObjectiveSet(Collection<Objective>) - Method in class ome.model.acquisition.Instrument

use like addObjective.

addOriginalFileAnnotationLink(OriginalFileAnnotationLink) - Method in class ome.model.core.OriginalFile

use instead of setAnnotationLinks .

addOriginalFileAnnotationLink(OriginalFileAnnotationLink, boolean) - Method in class ome.model.core.OriginalFile

Adds a ome.model.annotations.OriginalFileAnnotationLink to annotationLinks, allowing for recursion -- whether or not addOriginalFileAnnotationLink will be called on the addition if it is loaded

addOriginalFileAnnotationLinkSet(Collection<OriginalFileAnnotationLink>) - Method in class ome.model.core.OriginalFile

use like addOriginalFileAnnotationLink.

addOTF(OTF) - Method in class ome.model.acquisition.Instrument

use instead of setOtf .

addOTFSet(Collection<OTF>) - Method in class ome.model.acquisition.Instrument

use like addOTF.

addPixels(Pixels) - Method in class ome.model.core.Image

use instead of setPixels .

addPixelsOriginalFileMap(PixelsOriginalFileMap) - Method in class ome.model.core.OriginalFile

use instead of setPixelsFileMaps .

addPixelsOriginalFileMap(PixelsOriginalFileMap, boolean) - Method in class ome.model.core.OriginalFile

Adds a ome.model.core.PixelsOriginalFileMap to pixelsFileMaps, allowing for recursion -- whether or not addPixelsOriginalFileMap will be called on the addition if it is loaded

addPixelsOriginalFileMap(PixelsOriginalFileMap) - Method in class ome.model.core.Pixels

use instead of setPixelsFileMaps .

addPixelsOriginalFileMap(PixelsOriginalFileMap, boolean) - Method in class ome.model.core.Pixels

Adds a ome.model.core.PixelsOriginalFileMap to pixelsFileMaps, allowing for recursion -- whether or not addPixelsOriginalFileMap will be called on the addition if it is loaded

addPixelsOriginalFileMapSet(Collection<PixelsOriginalFileMap>) - Method in class ome.model.core.OriginalFile

use like addPixelsOriginalFileMap.

addPixelsOriginalFileMapSet(Collection<PixelsOriginalFileMap>) - Method in class ome.model.core.Pixels

use like addPixelsOriginalFileMap.

addPixelsSet(Collection<Pixels>) - Method in class ome.model.core.Image

use like addPixels.

addPlaneInfo(PlaneInfo) - Method in class ome.model.core.Pixels

use instead of setPlaneInfo .

addPlaneInfoAnnotationLink(PlaneInfoAnnotationLink) - Method in class ome.model.core.PlaneInfo

use instead of setAnnotationLinks .

addPlaneInfoAnnotationLink(PlaneInfoAnnotationLink, boolean) - Method in class ome.model.core.PlaneInfo

Adds a ome.model.annotations.PlaneInfoAnnotationLink to annotationLinks, allowing for recursion -- whether or not addPlaneInfoAnnotationLink will be called on the addition if it is loaded

addPlaneInfoAnnotationLinkSet(Collection<PlaneInfoAnnotationLink>) - Method in class ome.model.core.PlaneInfo

use like addPlaneInfoAnnotationLink.

addPlaneInfoSet(Collection<PlaneInfo>) - Method in class ome.model.core.Pixels

use like addPlaneInfo.

addPlateAcquisition(PlateAcquisition) - Method in class ome.model.screen.Plate

use instead of setPlateAcquisitions .

addPlateAcquisitionAnnotationLink(PlateAcquisitionAnnotationLink) - Method in class ome.model.screen.PlateAcquisition

use instead of setAnnotationLinks .

addPlateAcquisitionAnnotationLink(PlateAcquisitionAnnotationLink, boolean) - Method in class ome.model.screen.PlateAcquisition

Adds a ome.model.annotations.PlateAcquisitionAnnotationLink to annotationLinks, allowing for recursion -- whether or not addPlateAcquisitionAnnotationLink will be called on the addition if it is loaded

addPlateAcquisitionAnnotationLinkSet(Collection<PlateAcquisitionAnnotationLink>) - Method in class ome.model.screen.PlateAcquisition

use like addPlateAcquisitionAnnotationLink.

addPlateAcquisitionSet(Collection<PlateAcquisition>) - Method in class ome.model.screen.Plate

use like addPlateAcquisition.

addPlateAnnotationLink(PlateAnnotationLink) - Method in class ome.model.screen.Plate

use instead of setAnnotationLinks .

addPlateAnnotationLink(PlateAnnotationLink, boolean) - Method in class ome.model.screen.Plate

Adds a ome.model.annotations.PlateAnnotationLink to annotationLinks, allowing for recursion -- whether or not addPlateAnnotationLink will be called on the addition if it is loaded

addPlateAnnotationLinkSet(Collection<PlateAnnotationLink>) - Method in class ome.model.screen.Plate

use like addPlateAnnotationLink.

addProjectAnnotationLink(ProjectAnnotationLink) - Method in class ome.model.containers.Project

use instead of setAnnotationLinks .

addProjectAnnotationLink(ProjectAnnotationLink, boolean) - Method in class ome.model.containers.Project

Adds a ome.model.annotations.ProjectAnnotationLink to annotationLinks, allowing for recursion -- whether or not addProjectAnnotationLink will be called on the addition if it is loaded

addProjectAnnotationLinkSet(Collection<ProjectAnnotationLink>) - Method in class ome.model.containers.Project

use like addProjectAnnotationLink.

addProjectDatasetLink(ProjectDatasetLink) - Method in class ome.model.containers.Dataset

use instead of setProjectLinks .

addProjectDatasetLink(ProjectDatasetLink, boolean) - Method in class ome.model.containers.Dataset

Adds a ome.model.containers.ProjectDatasetLink to projectLinks, allowing for recursion -- whether or not addProjectDatasetLink will be called on the addition if it is loaded

addProjectDatasetLink(ProjectDatasetLink) - Method in class ome.model.containers.Project

use instead of setDatasetLinks .

addProjectDatasetLink(ProjectDatasetLink, boolean) - Method in class ome.model.containers.Project

Adds a ome.model.containers.ProjectDatasetLink to datasetLinks, allowing for recursion -- whether or not addProjectDatasetLink will be called on the addition if it is loaded

addProjectDatasetLinkSet(Collection<ProjectDatasetLink>) - Method in class ome.model.containers.Dataset

use like addProjectDatasetLink.

addProjectDatasetLinkSet(Collection<ProjectDatasetLink>) - Method in class ome.model.containers.Project

use like addProjectDatasetLink.

addProjectionDef(ProjectionDef) - Method in class ome.model.display.RenderingDef

use instead of setProjections .

addProjectionDefSet(Collection<ProjectionDef>) - Method in class ome.model.display.RenderingDef

use like addProjectionDef.

addReagent(Reagent) - Method in class ome.model.screen.Screen

use instead of setReagents .

addReagentAnnotationLink(ReagentAnnotationLink) - Method in class ome.model.screen.Reagent

use instead of setAnnotationLinks .

addReagentAnnotationLink(ReagentAnnotationLink, boolean) - Method in class ome.model.screen.Reagent

Adds a ome.model.annotations.ReagentAnnotationLink to annotationLinks, allowing for recursion -- whether or not addReagentAnnotationLink will be called on the addition if it is loaded

addReagentAnnotationLinkSet(Collection<ReagentAnnotationLink>) - Method in class ome.model.screen.Reagent

use like addReagentAnnotationLink.

addReagentSet(Collection<Reagent>) - Method in class ome.model.screen.Screen

use like addReagent.

addRenderingDef(RenderingDef) - Method in class ome.model.core.Pixels

use instead of setSettings .

addRenderingDefSet(Collection<RenderingDef>) - Method in class ome.model.core.Pixels

use like addRenderingDef.

addRoi(Roi) - Method in class ome.model.core.Image

use instead of setRois .

addRoiAnnotationLink(RoiAnnotationLink) - Method in class ome.model.roi.Roi

use instead of setAnnotationLinks .

addRoiAnnotationLink(RoiAnnotationLink, boolean) - Method in class ome.model.roi.Roi

Adds a ome.model.annotations.RoiAnnotationLink to annotationLinks, allowing for recursion -- whether or not addRoiAnnotationLink will be called on the addition if it is loaded

addRoiAnnotationLinkSet(Collection<RoiAnnotationLink>) - Method in class ome.model.roi.Roi

use like addRoiAnnotationLink.

addRoiSet(Collection<Roi>) - Method in class ome.model.core.Image

use like addRoi.

addScreenAnnotationLink(ScreenAnnotationLink) - Method in class ome.model.screen.Screen

use instead of setAnnotationLinks .

addScreenAnnotationLink(ScreenAnnotationLink, boolean) - Method in class ome.model.screen.Screen

Adds a ome.model.annotations.ScreenAnnotationLink to annotationLinks, allowing for recursion -- whether or not addScreenAnnotationLink will be called on the addition if it is loaded

addScreenAnnotationLinkSet(Collection<ScreenAnnotationLink>) - Method in class ome.model.screen.Screen

use like addScreenAnnotationLink.

addScreenPlateLink(ScreenPlateLink) - Method in class ome.model.screen.Plate

use instead of setScreenLinks .

addScreenPlateLink(ScreenPlateLink, boolean) - Method in class ome.model.screen.Plate

Adds a ome.model.screen.ScreenPlateLink to screenLinks, allowing for recursion -- whether or not addScreenPlateLink will be called on the addition if it is loaded

addScreenPlateLink(ScreenPlateLink) - Method in class ome.model.screen.Screen

use instead of setPlateLinks .

addScreenPlateLink(ScreenPlateLink, boolean) - Method in class ome.model.screen.Screen

Adds a ome.model.screen.ScreenPlateLink to plateLinks, allowing for recursion -- whether or not addScreenPlateLink will be called on the addition if it is loaded

addScreenPlateLinkSet(Collection<ScreenPlateLink>) - Method in class ome.model.screen.Plate

use like addScreenPlateLink.

addScreenPlateLinkSet(Collection<ScreenPlateLink>) - Method in class ome.model.screen.Screen

use like addScreenPlateLink.

addSeen(Object) - Method in class ome.util.ContextFilter

addSession(Session) - Method in class ome.model.meta.Node

use instead of setSessions .

addSessionAnnotationLink(SessionAnnotationLink) - Method in class ome.model.meta.Session

use instead of setAnnotationLinks .

addSessionAnnotationLink(SessionAnnotationLink, boolean) - Method in class ome.model.meta.Session

Adds a ome.model.annotations.SessionAnnotationLink to annotationLinks, allowing for recursion -- whether or not addSessionAnnotationLink will be called on the addition if it is loaded

addSessionAnnotationLinkSet(Collection<SessionAnnotationLink>) - Method in class ome.model.meta.Session

use like addSessionAnnotationLink.

addSessionSet(Collection<Session>) - Method in class ome.model.meta.Node

use like addSession.

addSet(String, Set) - Method in class ome.parameters.Parameters

addShape(Shape) - Method in class ome.model.roi.Roi

use instead of setShapes .

addShapeAnnotationLink(ShapeAnnotationLink) - Method in class ome.model.roi.Shape

use instead of setAnnotationLinks .

addShapeAnnotationLink(ShapeAnnotationLink, boolean) - Method in class ome.model.roi.Shape

Adds a ome.model.annotations.ShapeAnnotationLink to annotationLinks, allowing for recursion -- whether or not addShapeAnnotationLink will be called on the addition if it is loaded

addShapeAnnotationLinkSet(Collection<ShapeAnnotationLink>) - Method in class ome.model.roi.Shape

use like addShapeAnnotationLink.

addShapeSet(Collection<Shape>) - Method in class ome.model.roi.Roi

use like addShape.

addString(String, String) - Method in class ome.parameters.Parameters

addThumbnail(Thumbnail) - Method in class ome.model.core.Pixels

use instead of setThumbnails .

addThumbnailSet(Collection<Thumbnail>) - Method in class ome.model.core.Pixels

use like addThumbnail.

addViolation(ACLViolation) - Method in exception ome.conditions.acl.CollectedACLViolations

addWell(Well) - Method in class ome.model.screen.Plate

use instead of setWells .

addWellAnnotationLink(WellAnnotationLink) - Method in class ome.model.screen.Well

use instead of setAnnotationLinks .

addWellAnnotationLink(WellAnnotationLink, boolean) - Method in class ome.model.screen.Well

Adds a ome.model.annotations.WellAnnotationLink to annotationLinks, allowing for recursion -- whether or not addWellAnnotationLink will be called on the addition if it is loaded

addWellAnnotationLinkSet(Collection<WellAnnotationLink>) - Method in class ome.model.screen.Well

use like addWellAnnotationLink.

addWellReagentLink(WellReagentLink) - Method in class ome.model.screen.Reagent

use instead of setWellLinks .

addWellReagentLink(WellReagentLink, boolean) - Method in class ome.model.screen.Reagent

Adds a ome.model.screen.WellReagentLink to wellLinks, allowing for recursion -- whether or not addWellReagentLink will be called on the addition if it is loaded

addWellReagentLink(WellReagentLink) - Method in class ome.model.screen.Well

use instead of setReagentLinks .

addWellReagentLink(WellReagentLink, boolean) - Method in class ome.model.screen.Well

Adds a ome.model.screen.WellReagentLink to reagentLinks, allowing for recursion -- whether or not addWellReagentLink will be called on the addition if it is loaded

addWellReagentLinkSet(Collection<WellReagentLink>) - Method in class ome.model.screen.Reagent

use like addWellReagentLink.

addWellReagentLinkSet(Collection<WellReagentLink>) - Method in class ome.model.screen.Well

use like addWellReagentLink.

addWellSample(WellSample) - Method in class ome.model.core.Image

use instead of setWellSamples .

addWellSample(WellSample) - Method in class ome.model.screen.PlateAcquisition

use instead of setWellSample .

addWellSample(WellSample) - Method in class ome.model.screen.Well

use instead of setWellSamples .

addWellSampleSet(Collection<WellSample>) - Method in class ome.model.core.Image

use like addWellSample.

addWellSampleSet(Collection<WellSample>) - Method in class ome.model.screen.PlateAcquisition

use like addWellSample.

addWellSampleSet(Collection<WellSample>) - Method in class ome.model.screen.Well

use like addWellSample.

addWellSet(Collection<Well>) - Method in class ome.model.screen.Plate

use like addWell.

AdminPrivilege - Class in ome.model.enums

AdminPrivilege() - Constructor for class ome.model.enums.AdminPrivilege

AdminPrivilege(Long) - Constructor for class ome.model.enums.AdminPrivilege

AdminPrivilege(Long, boolean) - Constructor for class ome.model.enums.AdminPrivilege

Main constructor.

AdminPrivilege(String) - Constructor for class ome.model.enums.AdminPrivilege

AdminPrivilege.Details - Class in ome.model.enums

AffineTransform - Class in ome.model.roi

These filter definitions are used by the security system to eliminate non-readable objects from queries.

AffineTransform() - Constructor for class ome.model.roi.AffineTransform

AffineTransform(Long) - Constructor for class ome.model.roi.AffineTransform

AffineTransform(Long, boolean) - Constructor for class ome.model.roi.AffineTransform

Main constructor.

AffineTransform(Double, Double, Double, Double, Double, Double) - Constructor for class ome.model.roi.AffineTransform

AffineTransform.Details - Class in ome.model.roi

afterFilter(String, Object) - Method in class ome.util.ContextFilter

afterPropertiesSet() - Method in class ome.util.MapPut

airPressure - Variable in class ome.model.acquisition.ImagingEnvironment

AIRPRESSURE - Static variable in class ome.model.acquisition.ImagingEnvironment

ALGORITHM - Static variable in class ome.parameters.Parameters

named parameter "algorithm".

allExps() - Method in class ome.parameters.Parameters

alpha - Variable in class ome.model.core.Channel

ALPHA - Static variable in class ome.model.core.Channel

alpha - Variable in class ome.model.display.ChannelBinding

ALPHA - Static variable in class ome.model.display.ChannelBinding

alpha - Variable in class ome.model.screen.Well

ALPHA - Static variable in class ome.model.screen.Well

amplificationGain - Variable in class ome.model.acquisition.Detector

AMPLIFICATIONGAIN - Static variable in class ome.model.acquisition.Detector

ANNOTATERESTRICTION - Static variable in class ome.model.internal.Permissions

Annotation - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Annotation() - Constructor for class ome.model.annotations.Annotation

Annotation(Long) - Constructor for class ome.model.annotations.Annotation

Annotation(Long, boolean) - Constructor for class ome.model.annotations.Annotation

Main constructor.

Annotation.Details - Class in ome.model.annotations

AnnotationAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

AnnotationAnnotationLink() - Constructor for class ome.model.annotations.AnnotationAnnotationLink

AnnotationAnnotationLink(Long) - Constructor for class ome.model.annotations.AnnotationAnnotationLink

AnnotationAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.AnnotationAnnotationLink

Main constructor.

AnnotationAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.AnnotationAnnotationLink

AnnotationAnnotationLink.Details - Class in ome.model.annotations

annotationLinks - Variable in class ome.model.acquisition.Detector

ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Detector

annotationLinks - Variable in class ome.model.acquisition.Dichroic

ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Dichroic

annotationLinks - Variable in class ome.model.acquisition.Filter

ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Filter

annotationLinks - Variable in class ome.model.acquisition.Instrument

ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Instrument

annotationLinks - Variable in class ome.model.acquisition.LightPath

ANNOTATIONLINKS - Static variable in class ome.model.acquisition.LightPath

annotationLinks - Variable in class ome.model.acquisition.LightSource

ANNOTATIONLINKS - Static variable in class ome.model.acquisition.LightSource

annotationLinks - Variable in class ome.model.acquisition.Objective

ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Objective

annotationLinks - Variable in class ome.model.annotations.Annotation

ANNOTATIONLINKS - Static variable in class ome.model.annotations.Annotation

annotationLinks - Variable in class ome.model.containers.Dataset

ANNOTATIONLINKS - Static variable in class ome.model.containers.Dataset

annotationLinks - Variable in class ome.model.containers.Folder

ANNOTATIONLINKS - Static variable in class ome.model.containers.Folder

annotationLinks - Variable in class ome.model.containers.Project

ANNOTATIONLINKS - Static variable in class ome.model.containers.Project

annotationLinks - Variable in class ome.model.core.Channel

ANNOTATIONLINKS - Static variable in class ome.model.core.Channel

annotationLinks - Variable in class ome.model.core.Image

ANNOTATIONLINKS - Static variable in class ome.model.core.Image

annotationLinks - Variable in class ome.model.core.OriginalFile

ANNOTATIONLINKS - Static variable in class ome.model.core.OriginalFile

annotationLinks - Variable in class ome.model.core.PlaneInfo

ANNOTATIONLINKS - Static variable in class ome.model.core.PlaneInfo

annotationLinks - Variable in class ome.model.fs.Fileset

ANNOTATIONLINKS - Static variable in class ome.model.fs.Fileset

annotationLinks - Variable in class ome.model.meta.Experimenter

ANNOTATIONLINKS - Static variable in class ome.model.meta.Experimenter

annotationLinks - Variable in class ome.model.meta.ExperimenterGroup

ANNOTATIONLINKS - Static variable in class ome.model.meta.ExperimenterGroup

annotationLinks - Variable in class ome.model.meta.Namespace

ANNOTATIONLINKS - Static variable in class ome.model.meta.Namespace

annotationLinks - Variable in class ome.model.meta.Node

ANNOTATIONLINKS - Static variable in class ome.model.meta.Node

annotationLinks - Variable in class ome.model.meta.Session

ANNOTATIONLINKS - Static variable in class ome.model.meta.Session

annotationLinks - Variable in class ome.model.roi.Roi

ANNOTATIONLINKS - Static variable in class ome.model.roi.Roi

annotationLinks - Variable in class ome.model.roi.Shape

ANNOTATIONLINKS - Static variable in class ome.model.roi.Shape

annotationLinks - Variable in class ome.model.screen.Plate

ANNOTATIONLINKS - Static variable in class ome.model.screen.Plate

annotationLinks - Variable in class ome.model.screen.PlateAcquisition

ANNOTATIONLINKS - Static variable in class ome.model.screen.PlateAcquisition

annotationLinks - Variable in class ome.model.screen.Reagent

ANNOTATIONLINKS - Static variable in class ome.model.screen.Reagent

annotationLinks - Variable in class ome.model.screen.Screen

ANNOTATIONLINKS - Static variable in class ome.model.screen.Screen

annotationLinks - Variable in class ome.model.screen.Well

ANNOTATIONLINKS - Static variable in class ome.model.screen.Well

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.acquisition.Detector

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.acquisition.Dichroic

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.acquisition.Filter

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.acquisition.Instrument

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.acquisition.LightPath

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.acquisition.LightSource

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.acquisition.Objective

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.annotations.Annotation

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.containers.Dataset

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.containers.Folder

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.containers.Project

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.core.Channel

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.core.Image

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.core.OriginalFile

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.core.PlaneInfo

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.fs.Fileset

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.meta.Experimenter

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.meta.ExperimenterGroup

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.meta.Namespace

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.meta.Node

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.meta.Session

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.roi.Roi

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.roi.Shape

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.screen.Plate

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.screen.PlateAcquisition

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.screen.Reagent

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.screen.Screen

ANNOTATIONLINKSCOUNTPEROWNER - Static variable in class ome.model.screen.Well

ApiUsageException - Exception in ome.conditions

Alerts a user to a misuse of an Omero method call.

ApiUsageException(String) - Constructor for exception ome.conditions.ApiUsageException

Arc - Class in ome.model.acquisition

Arc() - Constructor for class ome.model.acquisition.Arc

Arc(Long) - Constructor for class ome.model.acquisition.Arc

Arc(Long, boolean) - Constructor for class ome.model.acquisition.Arc

Main constructor.

Arc(ArcType) - Constructor for class ome.model.acquisition.Arc

archived - Variable in class ome.model.core.Image

ARCHIVED - Static variable in class ome.model.core.Image

ArcType - Class in ome.model.enums

ArcType() - Constructor for class ome.model.enums.ArcType

ArcType(Long) - Constructor for class ome.model.enums.ArcType

ArcType(Long, boolean) - Constructor for class ome.model.enums.ArcType

Main constructor.

ArcType(String) - Constructor for class ome.model.enums.ArcType

ArcType.Details - Class in ome.model.enums

args() - Method in class ome.util.SqlAction.DeleteLog

asBigInteger() - Method in class ome.util.Counter

assemble(Serializable, Object) - Method in class ome.model.units.GenericEnumType

atime - Variable in class ome.model.core.OriginalFile

ATIME - Static variable in class ome.model.core.OriginalFile

attenuation - Variable in class ome.model.acquisition.LightSettings

ATTENUATION - Static variable in class ome.model.acquisition.LightSettings

AuthenticationException - Exception in ome.conditions

Invalid username and/or credential provided.

AuthenticationException(String) - Constructor for exception ome.conditions.AuthenticationException

axis - Variable in class ome.model.display.ProjectionDef

AXIS - Static variable in class ome.model.display.ProjectionDef

B

backOff - Variable in exception ome.conditions.ConcurrencyException

BasicAnnotation - Class in ome.model.annotations

BasicAnnotation() - Constructor for class ome.model.annotations.BasicAnnotation

BasicAnnotation(Long) - Constructor for class ome.model.annotations.BasicAnnotation

BasicAnnotation(Long, boolean) - Constructor for class ome.model.annotations.BasicAnnotation

Main constructor.

beforeFilter(String, Object) - Method in class ome.util.ContextFilter

BigResult - Exception in ome.model.units

Checked exception which is thrown from unit methods which can possibly overflow.

BigResult(BigDecimal, String) - Constructor for exception ome.model.units.BigResult

binning - Variable in class ome.model.acquisition.DetectorSettings

BINNING - Static variable in class ome.model.acquisition.DetectorSettings

Binning - Class in ome.model.enums

Binning() - Constructor for class ome.model.enums.Binning

Binning(Long) - Constructor for class ome.model.enums.Binning

Binning(Long, boolean) - Constructor for class ome.model.enums.Binning

Main constructor.

Binning(String) - Constructor for class ome.model.enums.Binning

Binning.Details - Class in ome.model.enums

bit(Permissions.Flag) - Static method in class ome.model.internal.Permissions

returns the order of the bit representing the given Permissions.Flag.

bit(Permissions.Role, Permissions.Right) - Static method in class ome.model.internal.Permissions

returns the order of the bit representing the given Permissions.Role and Permissions.Right.

BIT - Static variable in class ome.util.PixelData

Identifies the type used to store pixel values.

bitResolution - Variable in class ome.model.display.QuantumDef

BITRESOLUTION - Static variable in class ome.model.display.QuantumDef

bitSize - Variable in class ome.model.enums.PixelsType

BITSIZE - Static variable in class ome.model.enums.PixelsType

blue - Variable in class ome.model.core.Channel

BLUE - Static variable in class ome.model.core.Channel

blue - Variable in class ome.model.display.ChannelBinding

BLUE - Static variable in class ome.model.display.ChannelBinding

blue - Variable in class ome.model.screen.Well

BLUE - Static variable in class ome.model.screen.Well

BooleanAnnotation - Class in ome.model.annotations

BooleanAnnotation() - Constructor for class ome.model.annotations.BooleanAnnotation

BooleanAnnotation(Long) - Constructor for class ome.model.annotations.BooleanAnnotation

BooleanAnnotation(Long, boolean) - Constructor for class ome.model.annotations.BooleanAnnotation

Main constructor.

boolValue - Variable in class ome.model.annotations.BooleanAnnotation

BOOLVALUE - Static variable in class ome.model.annotations.BooleanAnnotation

bySymbol(String) - Static method in enum ome.model.enums.UnitsElectricPotential

bySymbol(String) - Static method in enum ome.model.enums.UnitsFrequency

bySymbol(String) - Static method in enum ome.model.enums.UnitsLength

bySymbol(String) - Static method in enum ome.model.enums.UnitsPower

bySymbol(String) - Static method in enum ome.model.enums.UnitsPressure

bySymbol(String) - Static method in enum ome.model.enums.UnitsTemperature

bySymbol(String) - Static method in enum ome.model.enums.UnitsTime

BYTE - Static variable in class ome.util.PixelData

Identifies the type used to store pixel values.

bytes - Variable in class ome.model.roi.Mask

BYTES - Static variable in class ome.model.roi.Mask

bytesPerPixel - Variable in class ome.util.PixelData

The number of bytes per pixel.

bytesPerPixel() - Method in class ome.util.PixelData

Returns the number of byte per pixel for the pixel data.

C

c2c() - Method in class ome.util.ModelMapper

TODO identity versus null mappings

cache() - Method in class ome.parameters.Parameters

Deprecated.

experimental: may be wholly removed in next major version

cacheable - Variable in class ome.parameters.Options

calibratedMagnification - Variable in class ome.model.acquisition.Objective

CALIBRATEDMAGNIFICATION - Static variable in class ome.model.acquisition.Objective

call(IObject) - Method in interface ome.util.CBlock

invoke this block.

call(IObject) - Method in class ome.util.IdBlock

CBlock<E> - Interface in ome.util

Block template used to "C"ollect the results of some function called on each IObject in a collection.

cdEnd - Variable in class ome.model.display.QuantumDef

CDEND - Static variable in class ome.model.display.QuantumDef

cdStart - Variable in class ome.model.display.QuantumDef

CDSTART - Static variable in class ome.model.display.QuantumDef

CGLIB_IDENTIFIER - Static variable in class ome.util.Utils

changeGroupPermissions(Long, Long) - Method in interface ome.util.SqlAction

changeGroupPermissions(Long, Long) - Method in class ome.util.SqlAction.Impl

changeTablePermissionsForGroup(String, Long, Long) - Method in interface ome.util.SqlAction

changeTablePermissionsForGroup(String, Long, Long) - Method in class ome.util.SqlAction.Impl

Channel - Class in ome.model.core

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Channel() - Constructor for class ome.model.core.Channel

Channel(Long) - Constructor for class ome.model.core.Channel

Channel(Long, boolean) - Constructor for class ome.model.core.Channel

Main constructor.

Channel(LogicalChannel, Pixels) - Constructor for class ome.model.core.Channel

Channel.Details - Class in ome.model.core

ChannelAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

ChannelAnnotationLink() - Constructor for class ome.model.annotations.ChannelAnnotationLink

ChannelAnnotationLink(Long) - Constructor for class ome.model.annotations.ChannelAnnotationLink

ChannelAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.ChannelAnnotationLink

Main constructor.

ChannelAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.ChannelAnnotationLink

ChannelAnnotationLink.Details - Class in ome.model.annotations

ChannelBinding - Class in ome.model.display

These filter definitions are used by the security system to eliminate non-readable objects from queries.

ChannelBinding() - Constructor for class ome.model.display.ChannelBinding

ChannelBinding(Long) - Constructor for class ome.model.display.ChannelBinding

ChannelBinding(Long, boolean) - Constructor for class ome.model.display.ChannelBinding

Main constructor.

ChannelBinding(RenderingDef, Family, Double, Double, Double, Boolean, Boolean, Integer, Integer, Integer, Integer) - Constructor for class ome.model.display.ChannelBinding

channelBinding - Variable in class ome.model.display.CodomainMapContext

CHANNELBINDING - Static variable in class ome.model.display.CodomainMapContext

ChannelBinding.Details - Class in ome.model.display

channels - Variable in class ome.model.core.LogicalChannel

CHANNELS - Static variable in class ome.model.core.LogicalChannel

channels - Variable in class ome.model.core.Pixels

CHANNELS - Static variable in class ome.model.core.Pixels

ChecksumAlgorithm - Class in ome.model.enums

ChecksumAlgorithm() - Constructor for class ome.model.enums.ChecksumAlgorithm

ChecksumAlgorithm(Long) - Constructor for class ome.model.enums.ChecksumAlgorithm

ChecksumAlgorithm(Long, boolean) - Constructor for class ome.model.enums.ChecksumAlgorithm

Main constructor.

ChecksumAlgorithm(String) - Constructor for class ome.model.enums.ChecksumAlgorithm

ChecksumAlgorithm.Details - Class in ome.model.enums

CHGRPRESTRICTION - Static variable in class ome.model.internal.Permissions

child - Variable in class ome.model.acquisition.FilterSetEmissionFilterLink

CHILD - Static variable in class ome.model.acquisition.FilterSetEmissionFilterLink

child() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink

child - Variable in class ome.model.acquisition.FilterSetExcitationFilterLink

CHILD - Static variable in class ome.model.acquisition.FilterSetExcitationFilterLink

child() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink

child - Variable in class ome.model.acquisition.LightPathEmissionFilterLink

CHILD - Static variable in class ome.model.acquisition.LightPathEmissionFilterLink

child() - Method in class ome.model.acquisition.LightPathEmissionFilterLink

child - Variable in class ome.model.acquisition.LightPathExcitationFilterLink

CHILD - Static variable in class ome.model.acquisition.LightPathExcitationFilterLink

child() - Method in class ome.model.acquisition.LightPathExcitationFilterLink

child - Variable in class ome.model.annotations.AnnotationAnnotationLink

CHILD - Static variable in class ome.model.annotations.AnnotationAnnotationLink

child() - Method in class ome.model.annotations.AnnotationAnnotationLink

child - Variable in class ome.model.annotations.ChannelAnnotationLink

CHILD - Static variable in class ome.model.annotations.ChannelAnnotationLink

child() - Method in class ome.model.annotations.ChannelAnnotationLink

child - Variable in class ome.model.annotations.DatasetAnnotationLink

CHILD - Static variable in class ome.model.annotations.DatasetAnnotationLink

child() - Method in class ome.model.annotations.DatasetAnnotationLink

child - Variable in class ome.model.annotations.DetectorAnnotationLink

CHILD - Static variable in class ome.model.annotations.DetectorAnnotationLink

child() - Method in class ome.model.annotations.DetectorAnnotationLink

child - Variable in class ome.model.annotations.DichroicAnnotationLink

CHILD - Static variable in class ome.model.annotations.DichroicAnnotationLink

child() - Method in class ome.model.annotations.DichroicAnnotationLink

child - Variable in class ome.model.annotations.ExperimenterAnnotationLink

CHILD - Static variable in class ome.model.annotations.ExperimenterAnnotationLink

child() - Method in class ome.model.annotations.ExperimenterAnnotationLink

child - Variable in class ome.model.annotations.ExperimenterGroupAnnotationLink

CHILD - Static variable in class ome.model.annotations.ExperimenterGroupAnnotationLink

child() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink

child - Variable in class ome.model.annotations.FilesetAnnotationLink

CHILD - Static variable in class ome.model.annotations.FilesetAnnotationLink

child() - Method in class ome.model.annotations.FilesetAnnotationLink

child - Variable in class ome.model.annotations.FilterAnnotationLink

CHILD - Static variable in class ome.model.annotations.FilterAnnotationLink

child() - Method in class ome.model.annotations.FilterAnnotationLink

child - Variable in class ome.model.annotations.FolderAnnotationLink

CHILD - Static variable in class ome.model.annotations.FolderAnnotationLink

child() - Method in class ome.model.annotations.FolderAnnotationLink

child - Variable in class ome.model.annotations.ImageAnnotationLink

CHILD - Static variable in class ome.model.annotations.ImageAnnotationLink

child() - Method in class ome.model.annotations.ImageAnnotationLink

child - Variable in class ome.model.annotations.InstrumentAnnotationLink

CHILD - Static variable in class ome.model.annotations.InstrumentAnnotationLink

child() - Method in class ome.model.annotations.InstrumentAnnotationLink

child - Variable in class ome.model.annotations.LightPathAnnotationLink

CHILD - Static variable in class ome.model.annotations.LightPathAnnotationLink

child() - Method in class ome.model.annotations.LightPathAnnotationLink

child - Variable in class ome.model.annotations.LightSourceAnnotationLink

CHILD - Static variable in class ome.model.annotations.LightSourceAnnotationLink

child() - Method in class ome.model.annotations.LightSourceAnnotationLink

child - Variable in class ome.model.annotations.NamespaceAnnotationLink

CHILD - Static variable in class ome.model.annotations.NamespaceAnnotationLink

child() - Method in class ome.model.annotations.NamespaceAnnotationLink

child - Variable in class ome.model.annotations.NodeAnnotationLink

CHILD - Static variable in class ome.model.annotations.NodeAnnotationLink

child() - Method in class ome.model.annotations.NodeAnnotationLink

child - Variable in class ome.model.annotations.ObjectiveAnnotationLink

CHILD - Static variable in class ome.model.annotations.ObjectiveAnnotationLink

child() - Method in class ome.model.annotations.ObjectiveAnnotationLink

child - Variable in class ome.model.annotations.OriginalFileAnnotationLink

CHILD - Static variable in class ome.model.annotations.OriginalFileAnnotationLink

child() - Method in class ome.model.annotations.OriginalFileAnnotationLink

child - Variable in class ome.model.annotations.PlaneInfoAnnotationLink

CHILD - Static variable in class ome.model.annotations.PlaneInfoAnnotationLink

child() - Method in class ome.model.annotations.PlaneInfoAnnotationLink

child - Variable in class ome.model.annotations.PlateAcquisitionAnnotationLink

CHILD - Static variable in class ome.model.annotations.PlateAcquisitionAnnotationLink

child() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink

child - Variable in class ome.model.annotations.PlateAnnotationLink

CHILD - Static variable in class ome.model.annotations.PlateAnnotationLink

child() - Method in class ome.model.annotations.PlateAnnotationLink

child - Variable in class ome.model.annotations.ProjectAnnotationLink

CHILD - Static variable in class ome.model.annotations.ProjectAnnotationLink

child() - Method in class ome.model.annotations.ProjectAnnotationLink

child - Variable in class ome.model.annotations.ReagentAnnotationLink

CHILD - Static variable in class ome.model.annotations.ReagentAnnotationLink

child() - Method in class ome.model.annotations.ReagentAnnotationLink

child - Variable in class ome.model.annotations.RoiAnnotationLink

CHILD - Static variable in class ome.model.annotations.RoiAnnotationLink

child() - Method in class ome.model.annotations.RoiAnnotationLink

child - Variable in class ome.model.annotations.ScreenAnnotationLink

CHILD - Static variable in class ome.model.annotations.ScreenAnnotationLink

child() - Method in class ome.model.annotations.ScreenAnnotationLink

child - Variable in class ome.model.annotations.SessionAnnotationLink

CHILD - Static variable in class ome.model.annotations.SessionAnnotationLink

child() - Method in class ome.model.annotations.SessionAnnotationLink

child - Variable in class ome.model.annotations.ShapeAnnotationLink

CHILD - Static variable in class ome.model.annotations.ShapeAnnotationLink

child() - Method in class ome.model.annotations.ShapeAnnotationLink

child - Variable in class ome.model.annotations.WellAnnotationLink

CHILD - Static variable in class ome.model.annotations.WellAnnotationLink

child() - Method in class ome.model.annotations.WellAnnotationLink

child - Variable in class ome.model.containers.DatasetImageLink

CHILD - Static variable in class ome.model.containers.DatasetImageLink

child() - Method in class ome.model.containers.DatasetImageLink

child - Variable in class ome.model.containers.FolderImageLink

CHILD - Static variable in class ome.model.containers.FolderImageLink

child() - Method in class ome.model.containers.FolderImageLink

child - Variable in class ome.model.containers.FolderRoiLink

CHILD - Static variable in class ome.model.containers.FolderRoiLink

child() - Method in class ome.model.containers.FolderRoiLink

child - Variable in class ome.model.containers.ProjectDatasetLink

CHILD - Static variable in class ome.model.containers.ProjectDatasetLink

child() - Method in class ome.model.containers.ProjectDatasetLink

child - Variable in class ome.model.core.PixelsOriginalFileMap

CHILD - Static variable in class ome.model.core.PixelsOriginalFileMap

child() - Method in class ome.model.core.PixelsOriginalFileMap

child - Variable in class ome.model.fs.FilesetJobLink

CHILD - Static variable in class ome.model.fs.FilesetJobLink

child() - Method in class ome.model.fs.FilesetJobLink

child - Variable in class ome.model.jobs.JobOriginalFileLink

CHILD - Static variable in class ome.model.jobs.JobOriginalFileLink

child() - Method in class ome.model.jobs.JobOriginalFileLink

child - Variable in class ome.model.meta.GroupExperimenterMap

CHILD - Static variable in class ome.model.meta.GroupExperimenterMap

child() - Method in class ome.model.meta.GroupExperimenterMap

child - Variable in class ome.model.meta.ShareMember

CHILD - Static variable in class ome.model.meta.ShareMember

child() - Method in class ome.model.meta.ShareMember

child - Variable in class ome.model.screen.ScreenPlateLink

CHILD - Static variable in class ome.model.screen.ScreenPlateLink

child() - Method in class ome.model.screen.ScreenPlateLink

child - Variable in class ome.model.screen.WellReagentLink

CHILD - Static variable in class ome.model.screen.WellReagentLink

child() - Method in class ome.model.screen.WellReagentLink

childFolders - Variable in class ome.model.containers.Folder

CHILDFOLDERS - Static variable in class ome.model.containers.Folder

CHOWNRESTRICTION - Static variable in class ome.model.internal.Permissions

CLASS - Static variable in class ome.parameters.Parameters

named parameter "class".

clearAnnotationLinks() - Method in class ome.model.acquisition.Detector

clears the set.

clearAnnotationLinks() - Method in class ome.model.acquisition.Dichroic

clears the set.

clearAnnotationLinks() - Method in class ome.model.acquisition.Filter

clears the set.

clearAnnotationLinks() - Method in class ome.model.acquisition.Instrument

clears the set.

clearAnnotationLinks() - Method in class ome.model.acquisition.LightPath

clears the set.

clearAnnotationLinks() - Method in class ome.model.acquisition.LightSource

clears the set.

clearAnnotationLinks() - Method in class ome.model.acquisition.Objective

clears the set.

clearAnnotationLinks() - Method in class ome.model.annotations.Annotation

clears the set.

clearAnnotationLinks() - Method in class ome.model.containers.Dataset

clears the set.

clearAnnotationLinks() - Method in class ome.model.containers.Folder

clears the set.

clearAnnotationLinks() - Method in class ome.model.containers.Project

clears the set.

clearAnnotationLinks() - Method in class ome.model.core.Channel

clears the set.

clearAnnotationLinks() - Method in class ome.model.core.Image

clears the set.

clearAnnotationLinks() - Method in class ome.model.core.OriginalFile

clears the set.

clearAnnotationLinks() - Method in class ome.model.core.PlaneInfo

clears the set.

clearAnnotationLinks() - Method in class ome.model.fs.Fileset

clears the set.

clearAnnotationLinks() - Method in interface ome.model.IAnnotated

clearAnnotationLinks() - Method in class ome.model.meta.Experimenter

clears the set.

clearAnnotationLinks() - Method in class ome.model.meta.ExperimenterGroup

clears the set.

clearAnnotationLinks() - Method in class ome.model.meta.Namespace

clears the set.

clearAnnotationLinks() - Method in class ome.model.meta.Node

clears the set.

clearAnnotationLinks() - Method in class ome.model.meta.Session

clears the set.

clearAnnotationLinks() - Method in class ome.model.roi.Roi

clears the set.

clearAnnotationLinks() - Method in class ome.model.roi.Shape

clears the set.

clearAnnotationLinks() - Method in class ome.model.screen.Plate

clears the set.

clearAnnotationLinks() - Method in class ome.model.screen.PlateAcquisition

clears the set.

clearAnnotationLinks() - Method in class ome.model.screen.Reagent

clears the set.

clearAnnotationLinks() - Method in class ome.model.screen.Screen

clears the set.

clearAnnotationLinks() - Method in class ome.model.screen.Well

clears the set.

clearChannels() - Method in class ome.model.core.LogicalChannel

clears the set.

clearChannels() - Method in class ome.model.core.Pixels

clears the set.

clearChildFolders() - Method in class ome.model.containers.Folder

clears the set.

clearDatasetLinks() - Method in class ome.model.containers.Project

clears the set.

clearDatasetLinks() - Method in class ome.model.core.Image

clears the set.

clearDetector() - Method in class ome.model.acquisition.Instrument

clears the set.

clearDichroic() - Method in class ome.model.acquisition.Instrument

clears the set.

clearEmissionFilterLinks() - Method in class ome.model.acquisition.Filter

clears the set.

clearEmissionFilterLinks() - Method in class ome.model.acquisition.FilterSet

clears the set.

clearEmissionFilterLinks() - Method in class ome.model.acquisition.LightPath

clears the set.

clearEvents() - Method in class ome.model.meta.Session

clears the set.

clearExcitationFilterLinks() - Method in class ome.model.acquisition.Filter

clears the set.

clearExcitationFilterLinks() - Method in class ome.model.acquisition.FilterSet

clears the set.

clearExcitationFilterLinks() - Method in class ome.model.acquisition.LightPath

clears the set.

clearExperimenterGroupLinks() - Method in class ome.model.meta.Experimenter

clears the set.

clearExperimenterLinks() - Method in class ome.model.meta.ExperimenterGroup

clears the set.

clearFilesetEntries() - Method in class ome.model.core.OriginalFile

clears the set.

clearFilter() - Method in class ome.model.acquisition.Instrument

clears the set.

clearFiltered() - Method in class ome.model.internal.Details

all currently marked collections are released.

clearFilterSet() - Method in class ome.model.acquisition.Instrument

clears the set.

clearFolderLinks() - Method in class ome.model.core.Image

clears the set.

clearFolderLinks() - Method in class ome.model.roi.Roi

clears the set.

clearImageLinks() - Method in class ome.model.containers.Dataset

clears the set.

clearImageLinks() - Method in class ome.model.containers.Folder

clears the set.

clearImages() - Method in class ome.model.fs.Fileset

clears the set.

clearJobLinks() - Method in class ome.model.fs.Fileset

clears the set.

clearLightSource() - Method in class ome.model.acquisition.Instrument

clears the set.

clearLightSourceSettings() - Method in class ome.model.experiment.MicrobeamManipulation

clears the set.

clearLogs() - Method in class ome.model.meta.Event

clears the set.

clearMicrobeamManipulation() - Method in class ome.model.experiment.Experiment

clears the set.

clearObjective() - Method in class ome.model.acquisition.Instrument

clears the set.

clearOriginalFileLinks() - Method in class ome.model.core.Pixels

clears the set.

clearOriginalFileLinks() - Method in class ome.model.jobs.Job

clears the set.

clearOtf() - Method in class ome.model.acquisition.Instrument

clears the set.

clearPermissionsBit(String, long, int) - Method in interface ome.util.SqlAction

Sets the given permissions bit to 0.

clearPermissionsBit(String, long, int) - Method in class ome.util.SqlAction.Impl

clearPixels() - Method in class ome.model.core.Image

clears the set.

clearPixelsLinks() - Method in class ome.model.core.OriginalFile

clears the set.

clearPlaneInfo() - Method in class ome.model.core.Pixels

clears the set.

clearPlateAcquisitions() - Method in class ome.model.screen.Plate

clears the set.

clearPlateLinks() - Method in class ome.model.screen.Screen

clears the set.

clearProjections() - Method in class ome.model.display.RenderingDef

clears the set.

clearProjectLinks() - Method in class ome.model.containers.Dataset

clears the set.

clearReagentLinks() - Method in class ome.model.screen.Well

clears the set.

clearReagents() - Method in class ome.model.screen.Screen

clears the set.

clearRoiLinks() - Method in class ome.model.containers.Folder

clears the set.

clearRois() - Method in class ome.model.core.Image

clears the set.

clearScreenLinks() - Method in class ome.model.screen.Plate

clears the set.

clearSessions() - Method in class ome.model.meta.Node

clears the set.

clearSettings() - Method in class ome.model.core.Pixels

clears the set.

clearShapes() - Method in class ome.model.roi.Roi

clears the set.

clearSpatialDomainEnhancement() - Method in class ome.model.display.ChannelBinding

clears the set.

clearThumbnails() - Method in class ome.model.core.Pixels

clears the set.

clearUsedFiles() - Method in class ome.model.fs.Fileset

clears the set.

clearWaveRendering() - Method in class ome.model.display.RenderingDef

clears the set.

clearWellLinks() - Method in class ome.model.screen.Reagent

clears the set.

clearWells() - Method in class ome.model.screen.Plate

clears the set.

clearWellSample() - Method in class ome.model.screen.PlateAcquisition

clears the set.

clearWellSamples() - Method in class ome.model.core.Image

clears the set.

clearWellSamples() - Method in class ome.model.screen.Well

clears the set.

clientPath - Variable in class ome.model.fs.FilesetEntry

CLIENTPATH - Static variable in class ome.model.fs.FilesetEntry

close() - Method in class ome.services.fulltext.ConfiguredAnalyzer

closed - Variable in class ome.model.meta.Session

CLOSED - Static variable in class ome.model.meta.Session

closeNode(String) - Method in interface ome.util.SqlAction

closeNode(String) - Method in class ome.util.SqlAction.Impl

closeNodeSessions(String) - Method in interface ome.util.SqlAction

closeNodeSessions(String) - Method in class ome.util.SqlAction.Impl

closeQuietly(Closeable) - Static method in class ome.util.Utils

closeSessions(String) - Method in class ome.util.actions.PostgresSqlAction

closeSessions(String) - Method in interface ome.util.SqlAction

co2percent - Variable in class ome.model.acquisition.ImagingEnvironment

CO2PERCENT - Static variable in class ome.model.acquisition.ImagingEnvironment

CodomainMapContext - Class in ome.model.display

These filter definitions are used by the security system to eliminate non-readable objects from queries.

CodomainMapContext() - Constructor for class ome.model.display.CodomainMapContext

CodomainMapContext(Long) - Constructor for class ome.model.display.CodomainMapContext

CodomainMapContext(Long, boolean) - Constructor for class ome.model.display.CodomainMapContext

Main constructor.

CodomainMapContext(ChannelBinding) - Constructor for class ome.model.display.CodomainMapContext

CodomainMapContext.Details - Class in ome.model.display

coefficient - Variable in class ome.model.display.ChannelBinding

COEFFICIENT - Static variable in class ome.model.display.ChannelBinding

COLLAB_READLINK - Static variable in class ome.model.internal.Permissions

an immutable Permissions instance with read and write permissions for group members.

COLLAB_READONLY - Static variable in class ome.model.internal.Permissions

an immutable Permissions instance with permissions for group members to read other members' data.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.acquisition.Detector

takes a CBlock and calls the block once for each ome.model.annotations.DetectorAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.acquisition.Dichroic

takes a CBlock and calls the block once for each ome.model.annotations.DichroicAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.acquisition.Filter

takes a CBlock and calls the block once for each ome.model.annotations.FilterAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.annotations.InstrumentAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.acquisition.LightPath

takes a CBlock and calls the block once for each ome.model.annotations.LightPathAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.acquisition.LightSource

takes a CBlock and calls the block once for each ome.model.annotations.LightSourceAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.acquisition.Objective

takes a CBlock and calls the block once for each ome.model.annotations.ObjectiveAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.annotations.Annotation

takes a CBlock and calls the block once for each ome.model.annotations.AnnotationAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.containers.Dataset

takes a CBlock and calls the block once for each ome.model.annotations.DatasetAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.containers.Folder

takes a CBlock and calls the block once for each ome.model.annotations.FolderAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.containers.Project

takes a CBlock and calls the block once for each ome.model.annotations.ProjectAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.core.Channel

takes a CBlock and calls the block once for each ome.model.annotations.ChannelAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.annotations.ImageAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.core.OriginalFile

takes a CBlock and calls the block once for each ome.model.annotations.OriginalFileAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.core.PlaneInfo

takes a CBlock and calls the block once for each ome.model.annotations.PlaneInfoAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.fs.Fileset

takes a CBlock and calls the block once for each ome.model.annotations.FilesetAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in interface ome.model.IAnnotated

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.meta.Experimenter

takes a CBlock and calls the block once for each ome.model.annotations.ExperimenterAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.meta.ExperimenterGroup

takes a CBlock and calls the block once for each ome.model.annotations.ExperimenterGroupAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.meta.Namespace

takes a CBlock and calls the block once for each ome.model.annotations.NamespaceAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.meta.Node

takes a CBlock and calls the block once for each ome.model.annotations.NodeAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.meta.Session

takes a CBlock and calls the block once for each ome.model.annotations.SessionAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.roi.Roi

takes a CBlock and calls the block once for each ome.model.annotations.RoiAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.roi.Shape

takes a CBlock and calls the block once for each ome.model.annotations.ShapeAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.screen.Plate

takes a CBlock and calls the block once for each ome.model.annotations.PlateAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.screen.PlateAcquisition

takes a CBlock and calls the block once for each ome.model.annotations.PlateAcquisitionAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.screen.Reagent

takes a CBlock and calls the block once for each ome.model.annotations.ReagentAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.screen.Screen

takes a CBlock and calls the block once for each ome.model.annotations.ScreenAnnotationLink while collecting the results.

collectAnnotationLinks(CBlock<E>) - Method in class ome.model.screen.Well

takes a CBlock and calls the block once for each ome.model.annotations.WellAnnotationLink while collecting the results.

collectChannels(CBlock<E>) - Method in class ome.model.core.LogicalChannel

takes a CBlock and calls the block once for each ome.model.core.Channel while collecting the results.

collectChannels(CBlock<E>) - Method in class ome.model.core.Pixels

takes a CBlock and calls the block once for each ome.model.core.Channel while collecting the results.

collectChildFolders(CBlock<E>) - Method in class ome.model.containers.Folder

takes a CBlock and calls the block once for each ome.model.containers.Folder while collecting the results.

collectDatasetLinks(CBlock<E>) - Method in class ome.model.containers.Project

takes a CBlock and calls the block once for each ome.model.containers.ProjectDatasetLink while collecting the results.

collectDatasetLinks(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.containers.DatasetImageLink while collecting the results.

collectDetector(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.acquisition.Detector while collecting the results.

collectDichroic(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.acquisition.Dichroic while collecting the results.

CollectedACLViolations - Exception in ome.conditions.acl

User has attempted an action which is not permitted by the Permissions of a given instance.

CollectedACLViolations(String) - Constructor for exception ome.conditions.acl.CollectedACLViolations

collectEmissionFilterLink(CBlock<E>) - Method in class ome.model.acquisition.Filter

takes a CBlock and calls the block once for each ome.model.acquisition.FilterSetEmissionFilterLink while collecting the results.

collectEmissionFilterLink(CBlock<E>) - Method in class ome.model.acquisition.FilterSet

takes a CBlock and calls the block once for each ome.model.acquisition.FilterSetEmissionFilterLink while collecting the results.

collectEmissionFilterLink(CBlock<E>) - Method in class ome.model.acquisition.LightPath

takes a CBlock and calls the block once for each ome.model.acquisition.LightPathEmissionFilterLink while collecting the results.

collectEvents(CBlock<E>) - Method in class ome.model.meta.Session

takes a CBlock and calls the block once for each ome.model.meta.Event while collecting the results.

collectExcitationFilterLink(CBlock<E>) - Method in class ome.model.acquisition.Filter

takes a CBlock and calls the block once for each ome.model.acquisition.FilterSetExcitationFilterLink while collecting the results.

collectExcitationFilterLink(CBlock<E>) - Method in class ome.model.acquisition.FilterSet

takes a CBlock and calls the block once for each ome.model.acquisition.FilterSetExcitationFilterLink while collecting the results.

collectExcitationFilterLink(CBlock<E>) - Method in class ome.model.acquisition.LightPath

takes a CBlock and calls the block once for each ome.model.acquisition.LightPathExcitationFilterLink while collecting the results.

collectFilesetEntries(CBlock<E>) - Method in class ome.model.core.OriginalFile

takes a CBlock and calls the block once for each ome.model.fs.FilesetEntry while collecting the results.

collectFilter(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.acquisition.Filter while collecting the results.

collectFilterSet(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.acquisition.FilterSet while collecting the results.

collectFolderLinks(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.containers.FolderImageLink while collecting the results.

collectFolderLinks(CBlock<E>) - Method in class ome.model.roi.Roi

takes a CBlock and calls the block once for each ome.model.containers.FolderRoiLink while collecting the results.

collectGroupExperimenterMap(CBlock<E>) - Method in class ome.model.meta.Experimenter

takes a CBlock and calls the block once for each ome.model.meta.GroupExperimenterMap while collecting the results.

collectGroupExperimenterMap(CBlock<E>) - Method in class ome.model.meta.ExperimenterGroup

takes a CBlock and calls the block once for each ome.model.meta.GroupExperimenterMap while collecting the results.

collectImageLinks(CBlock<E>) - Method in class ome.model.containers.Dataset

takes a CBlock and calls the block once for each ome.model.containers.DatasetImageLink while collecting the results.

collectImageLinks(CBlock<E>) - Method in class ome.model.containers.Folder

takes a CBlock and calls the block once for each ome.model.containers.FolderImageLink while collecting the results.

collectImages(CBlock<E>) - Method in class ome.model.fs.Fileset

takes a CBlock and calls the block once for each ome.model.core.Image while collecting the results.

collectJobLinks(CBlock<E>) - Method in class ome.model.fs.Fileset

takes a CBlock and calls the block once for each ome.model.fs.FilesetJobLink while collecting the results.

collectLightSource(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.acquisition.LightSource while collecting the results.

collectLightSourceSettings(CBlock<E>) - Method in class ome.model.experiment.MicrobeamManipulation

takes a CBlock and calls the block once for each ome.model.acquisition.LightSettings while collecting the results.

collectLogs(CBlock<E>) - Method in class ome.model.meta.Event

takes a CBlock and calls the block once for each ome.model.meta.EventLog while collecting the results.

collectMicrobeamManipulation(CBlock<E>) - Method in class ome.model.experiment.Experiment

takes a CBlock and calls the block once for each ome.model.experiment.MicrobeamManipulation while collecting the results.

collectObjective(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.acquisition.Objective while collecting the results.

collectOriginalFileLinks(CBlock<E>) - Method in class ome.model.jobs.Job

takes a CBlock and calls the block once for each ome.model.jobs.JobOriginalFileLink while collecting the results.

collectOtf(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.acquisition.OTF while collecting the results.

collectPixels(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.core.Pixels while collecting the results.

collectPixelsFileMaps(CBlock<E>) - Method in class ome.model.core.OriginalFile

takes a CBlock and calls the block once for each ome.model.core.PixelsOriginalFileMap while collecting the results.

collectPixelsFileMaps(CBlock<E>) - Method in class ome.model.core.Pixels

takes a CBlock and calls the block once for each ome.model.core.PixelsOriginalFileMap while collecting the results.

collectPlaneInfo(CBlock<E>) - Method in class ome.model.core.Pixels

takes a CBlock and calls the block once for each ome.model.core.PlaneInfo while collecting the results.

collectPlateAcquisitions(CBlock<E>) - Method in class ome.model.screen.Plate

takes a CBlock and calls the block once for each ome.model.screen.PlateAcquisition while collecting the results.

collectPlateLinks(CBlock<E>) - Method in class ome.model.screen.Screen

takes a CBlock and calls the block once for each ome.model.screen.ScreenPlateLink while collecting the results.

collectProjections(CBlock<E>) - Method in class ome.model.display.RenderingDef

takes a CBlock and calls the block once for each ome.model.display.ProjectionDef while collecting the results.

collectProjectLinks(CBlock<E>) - Method in class ome.model.containers.Dataset

takes a CBlock and calls the block once for each ome.model.containers.ProjectDatasetLink while collecting the results.

collectReagentLinks(CBlock<E>) - Method in class ome.model.screen.Well

takes a CBlock and calls the block once for each ome.model.screen.WellReagentLink while collecting the results.

collectReagents(CBlock<E>) - Method in class ome.model.screen.Screen

takes a CBlock and calls the block once for each ome.model.screen.Reagent while collecting the results.

collectRoiLinks(CBlock<E>) - Method in class ome.model.containers.Folder

takes a CBlock and calls the block once for each ome.model.containers.FolderRoiLink while collecting the results.

collectRois(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.roi.Roi while collecting the results.

collectScreenLinks(CBlock<E>) - Method in class ome.model.screen.Plate

takes a CBlock and calls the block once for each ome.model.screen.ScreenPlateLink while collecting the results.

collectSessions(CBlock<E>) - Method in class ome.model.meta.Node

takes a CBlock and calls the block once for each ome.model.meta.Session while collecting the results.

collectSettings(CBlock<E>) - Method in class ome.model.core.Pixels

takes a CBlock and calls the block once for each ome.model.display.RenderingDef while collecting the results.

collectShapes(CBlock<E>) - Method in class ome.model.roi.Roi

takes a CBlock and calls the block once for each ome.model.roi.Shape while collecting the results.

collectSpatialDomainEnhancement(CBlock<E>) - Method in class ome.model.display.ChannelBinding

takes a CBlock and calls the block once for each ome.model.display.CodomainMapContext while collecting the results.

collectThumbnails(CBlock<E>) - Method in class ome.model.core.Pixels

takes a CBlock and calls the block once for each ome.model.display.Thumbnail while collecting the results.

collectUsedFiles(CBlock<E>) - Method in class ome.model.fs.Fileset

takes a CBlock and calls the block once for each ome.model.fs.FilesetEntry while collecting the results.

collectWaveRendering(CBlock<E>) - Method in class ome.model.display.RenderingDef

takes a CBlock and calls the block once for each ome.model.display.ChannelBinding while collecting the results.

collectWellLinks(CBlock<E>) - Method in class ome.model.screen.Reagent

takes a CBlock and calls the block once for each ome.model.screen.WellReagentLink while collecting the results.

collectWells(CBlock<E>) - Method in class ome.model.screen.Plate

takes a CBlock and calls the block once for each ome.model.screen.Well while collecting the results.

collectWellSample(CBlock<E>) - Method in class ome.model.screen.PlateAcquisition

takes a CBlock and calls the block once for each ome.model.screen.WellSample while collecting the results.

collectWellSamples(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.screen.WellSample while collecting the results.

collectWellSamples(CBlock<E>) - Method in class ome.model.screen.Well

takes a CBlock and calls the block once for each ome.model.screen.WellSample while collecting the results.

column - Variable in class ome.model.screen.Well

COLUMN - Static variable in class ome.model.screen.Well

columnNamingConvention - Variable in class ome.model.screen.Plate

COLUMNNAMINGCONVENTION - Static variable in class ome.model.screen.Plate

columns - Variable in class ome.model.screen.Plate

COLUMNS - Static variable in class ome.model.screen.Plate

CommentAnnotation - Class in ome.model.annotations

CommentAnnotation() - Constructor for class ome.model.annotations.CommentAnnotation

CommentAnnotation(Long) - Constructor for class ome.model.annotations.CommentAnnotation

CommentAnnotation(Long, boolean) - Constructor for class ome.model.annotations.CommentAnnotation

Main constructor.

compression - Variable in class ome.model.display.RenderingDef

COMPRESSION - Static variable in class ome.model.display.RenderingDef

ConcurrencyException - Exception in ome.conditions

Error due to simultaneous access of some resource.

ConcurrencyException(String, long) - Constructor for exception ome.conditions.ConcurrencyException

config - Variable in class ome.model.meta.Experimenter

CONFIG - Static variable in class ome.model.meta.Experimenter

config - Variable in class ome.model.meta.ExperimenterGroup

CONFIG - Static variable in class ome.model.meta.ExperimenterGroup

CONFIG_KEY - Static variable in class ome.util.PixelData

configure(Type, Properties, Dialect) - Method in class ome.util.TableIdGenerator

ConfiguredAnalyzer - Class in ome.services.fulltext

A full-text search analyzer usable by the OMERO model.

ConfiguredAnalyzer() - Constructor for class ome.services.fulltext.ConfiguredAnalyzer

Construct an analyzer wrapping the same class as previously passed to ConfiguredAnalyzer.ConfiguredAnalyzer(Class).

ConfiguredAnalyzer(Class<? extends Analyzer>) - Constructor for class ome.services.fulltext.ConfiguredAnalyzer

Construct an analyzer wrapping the given class.

configValue(String) - Method in interface ome.util.SqlAction

configValue(String) - Method in class ome.util.SqlAction.Impl

conn - Variable in class ome.model.meta.Node

CONN - Static variable in class ome.model.meta.Node

constant - Variable in class ome.model.display.PlaneSlicingContext

CONSTANT - Static variable in class ome.model.display.PlaneSlicingContext

containingEvent - Variable in class ome.model.meta.Event

CONTAININGEVENT - Static variable in class ome.model.meta.Event

contextAt(int) - Method in class ome.model.internal.Details

ContextFilter - Class in ome.util

modified (hierarchical) visitor pattern.

ContextFilter() - Constructor for class ome.util.ContextFilter

contexts - Variable in class ome.model.internal.Details

contrastMethod - Variable in class ome.model.core.LogicalChannel

CONTRASTMETHOD - Static variable in class ome.model.core.LogicalChannel

ContrastMethod - Class in ome.model.enums

ContrastMethod() - Constructor for class ome.model.enums.ContrastMethod

ContrastMethod(Long) - Constructor for class ome.model.enums.ContrastMethod

ContrastMethod(Long, boolean) - Constructor for class ome.model.enums.ContrastMethod

Main constructor.

ContrastMethod(String) - Constructor for class ome.model.enums.ContrastMethod

ContrastMethod.Details - Class in ome.model.enums

ContrastStretchingContext - Class in ome.model.display

ContrastStretchingContext() - Constructor for class ome.model.display.ContrastStretchingContext

ContrastStretchingContext(Long) - Constructor for class ome.model.display.ContrastStretchingContext

ContrastStretchingContext(Long, boolean) - Constructor for class ome.model.display.ContrastStretchingContext

Main constructor.

ContrastStretchingContext(Integer, Integer, Integer, Integer) - Constructor for class ome.model.display.ContrastStretchingContext

Conversion - Class in ome.model.units

Base-functor like object which can be used for preparing complex equations for converting from one unit to another.

Conversion(Conversion...) - Constructor for class ome.model.units.Conversion

Primary constructor for a Conversion object.

Conversion.Add - Class in ome.model.units

Sums all Conversion instances via BigDecimal.add(BigDecimal).

Conversion.Int - Class in ome.model.units

Simply is a representation of a possibly large integer.

Conversion.Mul - Class in ome.model.units

Multiplies all Conversion instances via BigDecimal.multiply(BigDecimal).

Conversion.Pow - Class in ome.model.units

Exponentiates two Conversion instances via BigDecimal.pow(int).

Conversion.Rat - Class in ome.model.units

Divides two Conversion instances via BigDecimal.divide(BigDecimal, MathContext).

Conversion.Sym - Class in ome.model.units

Simply represents the variable of the source unit so that Conversion.Sym.convert(double) just returns the value passed in.

conversions - Variable in class ome.model.units.Conversion

Conversions, if any, which are passed into the constructor of this instance.

convert(double) - Method in class ome.model.units.Conversion.Add

convert(double) - Method in class ome.model.units.Conversion

Primary operator for Conversion instances.

convert(double) - Method in class ome.model.units.Conversion.Int

Returns a BigDecimal representation of this int.

convert(double) - Method in class ome.model.units.Conversion.Mul

convert(double) - Method in class ome.model.units.Conversion.Pow

convert(double) - Method in class ome.model.units.Conversion.Rat

convert(double) - Method in class ome.model.units.Conversion.Sym

convertElectricPotential(ElectricPotential) - Static method in class ome.model.units.ElectricPotential

FIXME: this should likely take a default so that locations which don't want an exception can have log.warn("Using new PositiveFloat(1.0)!", e); return new PositiveFloat(1.0); or similar.

convertElectricPotential(ElectricPotential, Unit<ElectricPotential>) - Static method in class ome.model.units.ElectricPotential

convertElectricPotential(ElectricPotential, String) - Static method in class ome.model.units.ElectricPotential

convertFrequency(Frequency) - Static method in class ome.model.units.Frequency

FIXME: this should likely take a default so that locations which don't want an exception can have log.warn("Using new PositiveFloat(1.0)!", e); return new PositiveFloat(1.0); or similar.

convertFrequency(Frequency, Unit<Frequency>) - Static method in class ome.model.units.Frequency

convertFrequency(Frequency, String) - Static method in class ome.model.units.Frequency

convertLength(Length) - Static method in class ome.model.units.Length

FIXME: this should likely take a default so that locations which don't want an exception can have log.warn("Using new PositiveFloat(1.0)!", e); return new PositiveFloat(1.0); or similar.

convertLength(Length, Unit<Length>) - Static method in class ome.model.units.Length

convertLength(Length, String) - Static method in class ome.model.units.Length

convertPower(Power) - Static method in class ome.model.units.Power

FIXME: this should likely take a default so that locations which don't want an exception can have log.warn("Using new PositiveFloat(1.0)!", e); return new PositiveFloat(1.0); or similar.

convertPower(Power, Unit<Power>) - Static method in class ome.model.units.Power

convertPower(Power, String) - Static method in class ome.model.units.Power

convertPressure(Pressure) - Static method in class ome.model.units.Pressure

FIXME: this should likely take a default so that locations which don't want an exception can have log.warn("Using new PositiveFloat(1.0)!", e); return new PositiveFloat(1.0); or similar.

convertPressure(Pressure, Unit<Pressure>) - Static method in class ome.model.units.Pressure

convertPressure(Pressure, String) - Static method in class ome.model.units.Pressure

convertTemperature(Temperature) - Static method in class ome.model.units.Temperature

FIXME: this should likely take a default so that locations which don't want an exception can have log.warn("Using new PositiveFloat(1.0)!", e); return new PositiveFloat(1.0); or similar.

convertTemperature(Temperature, Unit<Temperature>) - Static method in class ome.model.units.Temperature

convertTemperature(Temperature, String) - Static method in class ome.model.units.Temperature

convertTime(Time) - Static method in class ome.model.units.Time

FIXME: this should likely take a default so that locations which don't want an exception can have log.warn("Using new PositiveFloat(1.0)!", e); return new PositiveFloat(1.0); or similar.

convertTime(Time, Unit<Time>) - Static method in class ome.model.units.Time

convertTime(Time, String) - Static method in class ome.model.units.Time

copy() - Method in class ome.model.internal.Details

copy(Details) - Method in class ome.model.internal.Details

Method which takes all field values from the given Details instance and copies them into the current instance.

copy(T) - Method in class ome.util.ShallowCopy

copyExtendedRestrictions() - Method in class ome.model.internal.Permissions

Produce a copy of restrictions for use elsewhere.

copyObject(Filterable, ModelMapper) - Method in interface ome.model.ModelBased

copyRestrictions() - Method in class ome.model.internal.Permissions

Deprecated.

copyRestrictions(String[]) - Method in class ome.model.internal.Permissions

Safely copy the source array.

copyRestrictions(boolean[], String[]) - Method in class ome.model.internal.Permissions

Deprecated.

copyRestrictions(int, Set<String>) - Method in class ome.model.internal.Permissions

Copy restrictions based on the integer returned by BasicACLVoter.

copyWhereUnset(Details, Details) - Method in class ome.model.internal.Details

For any field of this which is null (and is NOT null on mask -- assuming mask is not null), copy the same value from copyFrom into this object.

correction - Variable in class ome.model.acquisition.Objective

CORRECTION - Static variable in class ome.model.acquisition.Objective

Correction - Class in ome.model.enums

Correction() - Constructor for class ome.model.enums.Correction

Correction(Long) - Constructor for class ome.model.enums.Correction

Correction(Long, boolean) - Constructor for class ome.model.enums.Correction

Main constructor.

Correction(String) - Constructor for class ome.model.enums.Correction

Correction.Details - Class in ome.model.enums

correctionCollar - Variable in class ome.model.acquisition.ObjectiveSettings

CORRECTIONCOLLAR - Static variable in class ome.model.acquisition.ObjectiveSettings

CountCollectionPersister - Class in ome.util

CollectionPersister which knows how to handle the count views generated by dsl/resources/ome/dsl/views.dm.

CountCollectionPersister(Collection, CollectionRegionAccessStrategy, Configuration, SessionFactoryImplementor) - Constructor for class ome.util.CountCollectionPersister

Counter - Class in ome.util

A simple integral counter that can be incremented.

Counter() - Constructor for class ome.util.Counter

Create a new counter starting at zero.

countFormat(String) - Method in class ome.util.actions.PostgresSqlAction

countFormat(String) - Method in interface ome.util.SqlAction

create() - Static method in class ome.model.internal.Details

Call Details.create(Object[]) with null.

create(Object[]) - Static method in class ome.model.internal.Details

Factory method which returns a Details implementation for passing in API calls, but cannot be stored within an IObject instance.

createBufferedImage(int[], int, int) - Static method in class ome.util.ImageUtil

Creates a buffered image from a rendering engine RGB buffer without data copying.

createIdsTempTable(Collection<Long>) - Method in interface ome.util.SqlAction

Creates a temporary table filled with the given ids and returns its name.

createIdsTempTable(Collection<Long>) - Method in class ome.util.SqlAction.Impl

createInsertTrigger(String, String, String) - Method in interface ome.util.SqlAction

Creates an insert trigger of the given name, for the given table, with the given procedure.

createInsertTrigger(String, String, String) - Method in class ome.util.SqlAction.Impl

createSavepoint(String) - Method in class ome.util.actions.PostgresSqlAction

createSavepoint(String) - Method in interface ome.util.SqlAction

CREATIONEVENT - Static variable in class ome.model.internal.Details

ctime - Variable in class ome.model.core.OriginalFile

CTIME - Static variable in class ome.model.core.OriginalFile

currentContext() - Method in class ome.util.ContextFilter

currentPatch - Variable in class ome.model.meta.DBPatch

CURRENTPATCH - Static variable in class ome.model.meta.DBPatch

currentUserNames() - Method in class ome.util.actions.PostgresSqlAction

currentUserNames() - Method in interface ome.util.SqlAction

currentVersion - Variable in class ome.model.meta.DBPatch

CURRENTVERSION - Static variable in class ome.model.meta.DBPatch

currValue(String) - Method in class ome.util.actions.PostgresSqlAction

currValue(String) - Method in interface ome.util.SqlAction

cutIn - Variable in class ome.model.acquisition.TransmittanceRange

CUTIN - Static variable in class ome.model.acquisition.TransmittanceRange

cutInTolerance - Variable in class ome.model.acquisition.TransmittanceRange

CUTINTOLERANCE - Static variable in class ome.model.acquisition.TransmittanceRange

cutOut - Variable in class ome.model.acquisition.TransmittanceRange

CUTOUT - Static variable in class ome.model.acquisition.TransmittanceRange

cutOutTolerance - Variable in class ome.model.acquisition.TransmittanceRange

CUTOUTTOLERANCE - Static variable in class ome.model.acquisition.TransmittanceRange

D

d - Variable in class ome.model.roi.Path

Deprecated.

D - Static variable in class ome.model.roi.Path

Deprecated.

data - Variable in class ome.model.meta.Share

DATA - Static variable in class ome.model.meta.Share

data - Variable in class ome.util.PixelData

The pixels data backing buffer.

DatabaseBusyException - Exception in ome.conditions

No connections are currently available for the database.

DatabaseBusyException(String, long) - Constructor for exception ome.conditions.DatabaseBusyException

Dataset - Class in ome.model.containers

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Dataset() - Constructor for class ome.model.containers.Dataset

Dataset(Long) - Constructor for class ome.model.containers.Dataset

Dataset(Long, boolean) - Constructor for class ome.model.containers.Dataset

Main constructor.

Dataset(String) - Constructor for class ome.model.containers.Dataset

Dataset.Details - Class in ome.model.containers

DatasetAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

DatasetAnnotationLink() - Constructor for class ome.model.annotations.DatasetAnnotationLink

DatasetAnnotationLink(Long) - Constructor for class ome.model.annotations.DatasetAnnotationLink

DatasetAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.DatasetAnnotationLink

Main constructor.

DatasetAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.DatasetAnnotationLink

DatasetAnnotationLink.Details - Class in ome.model.annotations

DatasetImageLink - Class in ome.model.containers

These filter definitions are used by the security system to eliminate non-readable objects from queries.

DatasetImageLink() - Constructor for class ome.model.containers.DatasetImageLink

DatasetImageLink(Long) - Constructor for class ome.model.containers.DatasetImageLink

DatasetImageLink(Long, boolean) - Constructor for class ome.model.containers.DatasetImageLink

Main constructor.

DatasetImageLink(IObject, IObject) - Constructor for class ome.model.containers.DatasetImageLink

DatasetImageLink.Details - Class in ome.model.containers

datasetLinks - Variable in class ome.model.containers.Project

DATASETLINKS - Static variable in class ome.model.containers.Project

datasetLinks - Variable in class ome.model.core.Image

DATASETLINKS - Static variable in class ome.model.core.Image

DATASETLINKSCOUNTPEROWNER - Static variable in class ome.model.containers.Project

DATASETLINKSCOUNTPEROWNER - Static variable in class ome.model.core.Image

DBPatch - Class in ome.model.meta

DBPatch() - Constructor for class ome.model.meta.DBPatch

DBPatch(Long) - Constructor for class ome.model.meta.DBPatch

DBPatch(Long, boolean) - Constructor for class ome.model.meta.DBPatch

Main constructor.

DBPatch(String, Integer, String, Integer) - Constructor for class ome.model.meta.DBPatch

DBPatch.Details - Class in ome.model.meta

dbUuid() - Method in class ome.util.actions.PostgresSqlAction

dbUuid() - Method in interface ome.util.SqlAction

dbVersion() - Method in class ome.util.actions.PostgresSqlAction

dbVersion() - Method in interface ome.util.SqlAction

deepCopy(Object) - Method in class ome.model.units.GenericEnumType

defaultEventType - Variable in class ome.model.meta.Session

DEFAULTEVENTTYPE - Static variable in class ome.model.meta.Session

defaultSample - Variable in class ome.model.screen.Plate

DEFAULTSAMPLE - Static variable in class ome.model.screen.Plate

defaultT - Variable in class ome.model.display.RenderingDef

DEFAULTT - Static variable in class ome.model.display.RenderingDef

defaultZ - Variable in class ome.model.display.RenderingDef

DEFAULTZ - Static variable in class ome.model.display.RenderingDef

deferConstraints() - Method in class ome.util.actions.PostgresSqlAction

deferConstraints() - Method in interface ome.util.SqlAction

delConfigValue(String) - Method in interface ome.util.SqlAction

delConfigValue(String) - Method in class ome.util.SqlAction.Impl

delCurrentEventLog(String) - Method in class ome.util.actions.PostgresSqlAction

delCurrentEventLog(String) - Method in interface ome.util.SqlAction

delCurrentEventLog(String) - Method in class ome.util.SqlAction.Impl

deleteCurrentAdminPrivileges() - Method in interface ome.util.SqlAction

Delete the current light administrator privileges for the current transaction.

deleteCurrentAdminPrivileges() - Method in class ome.util.SqlAction.Impl

DeleteLog() - Constructor for class ome.util.SqlAction.DeleteLog

deleteOldAdminPrivileges(Collection<Long>) - Method in interface ome.util.SqlAction

Delete the current light administrator privileges for the given transactions.

deleteOldAdminPrivileges(Collection<Long>) - Method in class ome.util.SqlAction.Impl

deleteRepoDeleteLogs(SqlAction.DeleteLog) - Method in interface ome.util.SqlAction

Delete all SqlAction.DeleteLog entries which match all of the non-null fields provided in the template.

deleteRepoDeleteLogs(SqlAction.DeleteLog) - Method in class ome.util.SqlAction.Impl

DELETERESTRICTION - Static variable in class ome.model.internal.Permissions

deleteRows(PersistentCollection, Serializable, SessionImplementor) - Method in class ome.util.CountCollectionPersister

deltaT - Variable in class ome.model.core.PlaneInfo

DELTAT - Static variable in class ome.model.core.PlaneInfo

description - Variable in class ome.model.annotations.Annotation

DESCRIPTION - Static variable in class ome.model.annotations.Annotation

description - Variable in class ome.model.containers.Dataset

DESCRIPTION - Static variable in class ome.model.containers.Dataset

description - Variable in class ome.model.containers.Folder

DESCRIPTION - Static variable in class ome.model.containers.Folder

description - Variable in class ome.model.containers.Project

DESCRIPTION - Static variable in class ome.model.containers.Project

description - Variable in class ome.model.core.Image

DESCRIPTION - Static variable in class ome.model.core.Image

description - Variable in class ome.model.experiment.Experiment

DESCRIPTION - Static variable in class ome.model.experiment.Experiment

description - Variable in class ome.model.experiment.MicrobeamManipulation

DESCRIPTION - Static variable in class ome.model.experiment.MicrobeamManipulation

description - Variable in class ome.model.jobs.ScriptJob

DESCRIPTION - Static variable in class ome.model.jobs.ScriptJob

description - Variable in class ome.model.meta.ExperimenterGroup

DESCRIPTION - Static variable in class ome.model.meta.ExperimenterGroup

description - Variable in class ome.model.meta.Namespace

DESCRIPTION - Static variable in class ome.model.meta.Namespace

description - Variable in class ome.model.roi.Roi

DESCRIPTION - Static variable in class ome.model.roi.Roi

description - Variable in class ome.model.screen.Plate

DESCRIPTION - Static variable in class ome.model.screen.Plate

description - Variable in class ome.model.screen.PlateAcquisition

DESCRIPTION - Static variable in class ome.model.screen.PlateAcquisition

description - Variable in class ome.model.screen.Reagent

DESCRIPTION - Static variable in class ome.model.screen.Reagent

description - Variable in class ome.model.screen.Screen

DESCRIPTION - Static variable in class ome.model.screen.Screen

details - Variable in class ome.model.acquisition.Detector

DETAILS - Static variable in class ome.model.acquisition.Detector

Details() - Constructor for class ome.model.acquisition.Detector.Details

Details(Object[]) - Constructor for class ome.model.acquisition.Detector.Details

details - Variable in class ome.model.acquisition.DetectorSettings

DETAILS - Static variable in class ome.model.acquisition.DetectorSettings

Details() - Constructor for class ome.model.acquisition.DetectorSettings.Details

Details(Object[]) - Constructor for class ome.model.acquisition.DetectorSettings.Details

details - Variable in class ome.model.acquisition.Dichroic

DETAILS - Static variable in class ome.model.acquisition.Dichroic

Details() - Constructor for class ome.model.acquisition.Dichroic.Details

Details(Object[]) - Constructor for class ome.model.acquisition.Dichroic.Details

details - Variable in class ome.model.acquisition.Filter

DETAILS - Static variable in class ome.model.acquisition.Filter

Details() - Constructor for class ome.model.acquisition.Filter.Details

Details(Object[]) - Constructor for class ome.model.acquisition.Filter.Details

details - Variable in class ome.model.acquisition.FilterSet

DETAILS - Static variable in class ome.model.acquisition.FilterSet

Details() - Constructor for class ome.model.acquisition.FilterSet.Details

Details(Object[]) - Constructor for class ome.model.acquisition.FilterSet.Details

details - Variable in class ome.model.acquisition.FilterSetEmissionFilterLink

DETAILS - Static variable in class ome.model.acquisition.FilterSetEmissionFilterLink

Details() - Constructor for class ome.model.acquisition.FilterSetEmissionFilterLink.Details

Details(Object[]) - Constructor for class ome.model.acquisition.FilterSetEmissionFilterLink.Details

details - Variable in class ome.model.acquisition.FilterSetExcitationFilterLink

DETAILS - Static variable in class ome.model.acquisition.FilterSetExcitationFilterLink

Details() - Constructor for class ome.model.acquisition.FilterSetExcitationFilterLink.Details

Details(Object[]) - Constructor for class ome.model.acquisition.FilterSetExcitationFilterLink.Details

details - Variable in class ome.model.acquisition.ImagingEnvironment

DETAILS - Static variable in class ome.model.acquisition.ImagingEnvironment

Details() - Constructor for class ome.model.acquisition.ImagingEnvironment.Details

Details(Object[]) - Constructor for class ome.model.acquisition.ImagingEnvironment.Details

details - Variable in class ome.model.acquisition.Instrument

DETAILS - Static variable in class ome.model.acquisition.Instrument

Details() - Constructor for class ome.model.acquisition.Instrument.Details

Details(Object[]) - Constructor for class ome.model.acquisition.Instrument.Details

details - Variable in class ome.model.acquisition.LightPath

DETAILS - Static variable in class ome.model.acquisition.LightPath

Details() - Constructor for class ome.model.acquisition.LightPath.Details

Details(Object[]) - Constructor for class ome.model.acquisition.LightPath.Details

details - Variable in class ome.model.acquisition.LightPathEmissionFilterLink

DETAILS - Static variable in class ome.model.acquisition.LightPathEmissionFilterLink

Details() - Constructor for class ome.model.acquisition.LightPathEmissionFilterLink.Details

Details(Object[]) - Constructor for class ome.model.acquisition.LightPathEmissionFilterLink.Details

details - Variable in class ome.model.acquisition.LightPathExcitationFilterLink

DETAILS - Static variable in class ome.model.acquisition.LightPathExcitationFilterLink

Details() - Constructor for class ome.model.acquisition.LightPathExcitationFilterLink.Details

Details(Object[]) - Constructor for class ome.model.acquisition.LightPathExcitationFilterLink.Details

details - Variable in class ome.model.acquisition.LightSettings

DETAILS - Static variable in class ome.model.acquisition.LightSettings

Details() - Constructor for class ome.model.acquisition.LightSettings.Details

Details(Object[]) - Constructor for class ome.model.acquisition.LightSettings.Details

details - Variable in class ome.model.acquisition.LightSource

DETAILS - Static variable in class ome.model.acquisition.LightSource

Details() - Constructor for class ome.model.acquisition.LightSource.Details

Details(Object[]) - Constructor for class ome.model.acquisition.LightSource.Details

details - Variable in class ome.model.acquisition.Microscope

DETAILS - Static variable in class ome.model.acquisition.Microscope

Details() - Constructor for class ome.model.acquisition.Microscope.Details

Details(Object[]) - Constructor for class ome.model.acquisition.Microscope.Details

details - Variable in class ome.model.acquisition.Objective

DETAILS - Static variable in class ome.model.acquisition.Objective

Details() - Constructor for class ome.model.acquisition.Objective.Details

Details(Object[]) - Constructor for class ome.model.acquisition.Objective.Details

details - Variable in class ome.model.acquisition.ObjectiveSettings

DETAILS - Static variable in class ome.model.acquisition.ObjectiveSettings

Details() - Constructor for class ome.model.acquisition.ObjectiveSettings.Details

Details(Object[]) - Constructor for class ome.model.acquisition.ObjectiveSettings.Details

details - Variable in class ome.model.acquisition.OTF

DETAILS - Static variable in class ome.model.acquisition.OTF

Details() - Constructor for class ome.model.acquisition.OTF.Details

Details(Object[]) - Constructor for class ome.model.acquisition.OTF.Details

details - Variable in class ome.model.acquisition.StageLabel

DETAILS - Static variable in class ome.model.acquisition.StageLabel

Details() - Constructor for class ome.model.acquisition.StageLabel.Details

Details(Object[]) - Constructor for class ome.model.acquisition.StageLabel.Details

details - Variable in class ome.model.acquisition.TransmittanceRange

DETAILS - Static variable in class ome.model.acquisition.TransmittanceRange

Details() - Constructor for class ome.model.acquisition.TransmittanceRange.Details

Details(Object[]) - Constructor for class ome.model.acquisition.TransmittanceRange.Details

details - Variable in class ome.model.annotations.Annotation

DETAILS - Static variable in class ome.model.annotations.Annotation

Details() - Constructor for class ome.model.annotations.Annotation.Details

Details(Object[]) - Constructor for class ome.model.annotations.Annotation.Details

details - Variable in class ome.model.annotations.AnnotationAnnotationLink

DETAILS - Static variable in class ome.model.annotations.AnnotationAnnotationLink

Details() - Constructor for class ome.model.annotations.AnnotationAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.AnnotationAnnotationLink.Details

details - Variable in class ome.model.annotations.ChannelAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ChannelAnnotationLink

Details() - Constructor for class ome.model.annotations.ChannelAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ChannelAnnotationLink.Details

details - Variable in class ome.model.annotations.DatasetAnnotationLink

DETAILS - Static variable in class ome.model.annotations.DatasetAnnotationLink

Details() - Constructor for class ome.model.annotations.DatasetAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.DatasetAnnotationLink.Details

details - Variable in class ome.model.annotations.DetectorAnnotationLink

DETAILS - Static variable in class ome.model.annotations.DetectorAnnotationLink

Details() - Constructor for class ome.model.annotations.DetectorAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.DetectorAnnotationLink.Details

details - Variable in class ome.model.annotations.DichroicAnnotationLink

DETAILS - Static variable in class ome.model.annotations.DichroicAnnotationLink

Details() - Constructor for class ome.model.annotations.DichroicAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.DichroicAnnotationLink.Details

details - Variable in class ome.model.annotations.ExperimenterAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ExperimenterAnnotationLink

Details() - Constructor for class ome.model.annotations.ExperimenterAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ExperimenterAnnotationLink.Details

details - Variable in class ome.model.annotations.ExperimenterGroupAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ExperimenterGroupAnnotationLink

Details() - Constructor for class ome.model.annotations.ExperimenterGroupAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ExperimenterGroupAnnotationLink.Details

details - Variable in class ome.model.annotations.FilesetAnnotationLink

DETAILS - Static variable in class ome.model.annotations.FilesetAnnotationLink

Details() - Constructor for class ome.model.annotations.FilesetAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.FilesetAnnotationLink.Details

details - Variable in class ome.model.annotations.FilterAnnotationLink

DETAILS - Static variable in class ome.model.annotations.FilterAnnotationLink

Details() - Constructor for class ome.model.annotations.FilterAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.FilterAnnotationLink.Details

details - Variable in class ome.model.annotations.FolderAnnotationLink

DETAILS - Static variable in class ome.model.annotations.FolderAnnotationLink

Details() - Constructor for class ome.model.annotations.FolderAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.FolderAnnotationLink.Details

details - Variable in class ome.model.annotations.ImageAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ImageAnnotationLink

Details() - Constructor for class ome.model.annotations.ImageAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ImageAnnotationLink.Details

details - Variable in class ome.model.annotations.InstrumentAnnotationLink

DETAILS - Static variable in class ome.model.annotations.InstrumentAnnotationLink

Details() - Constructor for class ome.model.annotations.InstrumentAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.InstrumentAnnotationLink.Details

details - Variable in class ome.model.annotations.LightPathAnnotationLink

DETAILS - Static variable in class ome.model.annotations.LightPathAnnotationLink

Details() - Constructor for class ome.model.annotations.LightPathAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.LightPathAnnotationLink.Details

details - Variable in class ome.model.annotations.LightSourceAnnotationLink

DETAILS - Static variable in class ome.model.annotations.LightSourceAnnotationLink

Details() - Constructor for class ome.model.annotations.LightSourceAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.LightSourceAnnotationLink.Details

details - Variable in class ome.model.annotations.NamespaceAnnotationLink

DETAILS - Static variable in class ome.model.annotations.NamespaceAnnotationLink

Details() - Constructor for class ome.model.annotations.NamespaceAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.NamespaceAnnotationLink.Details

details - Variable in class ome.model.annotations.NodeAnnotationLink

DETAILS - Static variable in class ome.model.annotations.NodeAnnotationLink

Details() - Constructor for class ome.model.annotations.NodeAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.NodeAnnotationLink.Details

details - Variable in class ome.model.annotations.ObjectiveAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ObjectiveAnnotationLink

Details() - Constructor for class ome.model.annotations.ObjectiveAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ObjectiveAnnotationLink.Details

details - Variable in class ome.model.annotations.OriginalFileAnnotationLink

DETAILS - Static variable in class ome.model.annotations.OriginalFileAnnotationLink

Details() - Constructor for class ome.model.annotations.OriginalFileAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.OriginalFileAnnotationLink.Details

details - Variable in class ome.model.annotations.PlaneInfoAnnotationLink

DETAILS - Static variable in class ome.model.annotations.PlaneInfoAnnotationLink

Details() - Constructor for class ome.model.annotations.PlaneInfoAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.PlaneInfoAnnotationLink.Details

details - Variable in class ome.model.annotations.PlateAcquisitionAnnotationLink

DETAILS - Static variable in class ome.model.annotations.PlateAcquisitionAnnotationLink

Details() - Constructor for class ome.model.annotations.PlateAcquisitionAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.PlateAcquisitionAnnotationLink.Details

details - Variable in class ome.model.annotations.PlateAnnotationLink

DETAILS - Static variable in class ome.model.annotations.PlateAnnotationLink

Details() - Constructor for class ome.model.annotations.PlateAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.PlateAnnotationLink.Details

details - Variable in class ome.model.annotations.ProjectAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ProjectAnnotationLink

Details() - Constructor for class ome.model.annotations.ProjectAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ProjectAnnotationLink.Details

details - Variable in class ome.model.annotations.ReagentAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ReagentAnnotationLink

Details() - Constructor for class ome.model.annotations.ReagentAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ReagentAnnotationLink.Details

details - Variable in class ome.model.annotations.RoiAnnotationLink

DETAILS - Static variable in class ome.model.annotations.RoiAnnotationLink

Details() - Constructor for class ome.model.annotations.RoiAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.RoiAnnotationLink.Details

details - Variable in class ome.model.annotations.ScreenAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ScreenAnnotationLink

Details() - Constructor for class ome.model.annotations.ScreenAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ScreenAnnotationLink.Details

details - Variable in class ome.model.annotations.SessionAnnotationLink

DETAILS - Static variable in class ome.model.annotations.SessionAnnotationLink

Details() - Constructor for class ome.model.annotations.SessionAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.SessionAnnotationLink.Details

details - Variable in class ome.model.annotations.ShapeAnnotationLink

DETAILS - Static variable in class ome.model.annotations.ShapeAnnotationLink

Details() - Constructor for class ome.model.annotations.ShapeAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.ShapeAnnotationLink.Details

details - Variable in class ome.model.annotations.WellAnnotationLink

DETAILS - Static variable in class ome.model.annotations.WellAnnotationLink

Details() - Constructor for class ome.model.annotations.WellAnnotationLink.Details

Details(Object[]) - Constructor for class ome.model.annotations.WellAnnotationLink.Details

details - Variable in class ome.model.containers.Dataset

DETAILS - Static variable in class ome.model.containers.Dataset

Details() - Constructor for class ome.model.containers.Dataset.Details

Details(Object[]) - Constructor for class ome.model.containers.Dataset.Details

details - Variable in class ome.model.containers.DatasetImageLink

DETAILS - Static variable in class ome.model.containers.DatasetImageLink

Details() - Constructor for class ome.model.containers.DatasetImageLink.Details

Details(Object[]) - Constructor for class ome.model.containers.DatasetImageLink.Details

details - Variable in class ome.model.containers.Folder

DETAILS - Static variable in class ome.model.containers.Folder

Details() - Constructor for class ome.model.containers.Folder.Details

Details(Object[]) - Constructor for class ome.model.containers.Folder.Details

details - Variable in class ome.model.containers.FolderImageLink

DETAILS - Static variable in class ome.model.containers.FolderImageLink

Details() - Constructor for class ome.model.containers.FolderImageLink.Details

Details(Object[]) - Constructor for class ome.model.containers.FolderImageLink.Details

details - Variable in class ome.model.containers.FolderRoiLink

DETAILS - Static variable in class ome.model.containers.FolderRoiLink

Details() - Constructor for class ome.model.containers.FolderRoiLink.Details

Details(Object[]) - Constructor for class ome.model.containers.FolderRoiLink.Details

details - Variable in class ome.model.containers.Project

DETAILS - Static variable in class ome.model.containers.Project

Details() - Constructor for class ome.model.containers.Project.Details

Details(Object[]) - Constructor for class ome.model.containers.Project.Details

details - Variable in class ome.model.containers.ProjectDatasetLink

DETAILS - Static variable in class ome.model.containers.ProjectDatasetLink

Details() - Constructor for class ome.model.containers.ProjectDatasetLink.Details

Details(Object[]) - Constructor for class ome.model.containers.ProjectDatasetLink.Details

details - Variable in class ome.model.core.Channel

DETAILS - Static variable in class ome.model.core.Channel

Details() - Constructor for class ome.model.core.Channel.Details

Details(Object[]) - Constructor for class ome.model.core.Channel.Details

details - Variable in class ome.model.core.Image

DETAILS - Static variable in class ome.model.core.Image

Details() - Constructor for class ome.model.core.Image.Details

Details(Object[]) - Constructor for class ome.model.core.Image.Details

details - Variable in class ome.model.core.LogicalChannel

DETAILS - Static variable in class ome.model.core.LogicalChannel

Details() - Constructor for class ome.model.core.LogicalChannel.Details

Details(Object[]) - Constructor for class ome.model.core.LogicalChannel.Details

details - Variable in class ome.model.core.OriginalFile

DETAILS - Static variable in class ome.model.core.OriginalFile

Details() - Constructor for class ome.model.core.OriginalFile.Details

Details(Object[]) - Constructor for class ome.model.core.OriginalFile.Details

details - Variable in class ome.model.core.Pixels

DETAILS - Static variable in class ome.model.core.Pixels

Details() - Constructor for class ome.model.core.Pixels.Details

Details(Object[]) - Constructor for class ome.model.core.Pixels.Details

details - Variable in class ome.model.core.PixelsOriginalFileMap

DETAILS - Static variable in class ome.model.core.PixelsOriginalFileMap

Details() - Constructor for class ome.model.core.PixelsOriginalFileMap.Details

Details(Object[]) - Constructor for class ome.model.core.PixelsOriginalFileMap.Details

details - Variable in class ome.model.core.PlaneInfo

DETAILS - Static variable in class ome.model.core.PlaneInfo

Details() - Constructor for class ome.model.core.PlaneInfo.Details

Details(Object[]) - Constructor for class ome.model.core.PlaneInfo.Details

details - Variable in class ome.model.display.ChannelBinding

DETAILS - Static variable in class ome.model.display.ChannelBinding

Details() - Constructor for class ome.model.display.ChannelBinding.Details

Details(Object[]) - Constructor for class ome.model.display.ChannelBinding.Details

details - Variable in class ome.model.display.CodomainMapContext

DETAILS - Static variable in class ome.model.display.CodomainMapContext

Details() - Constructor for class ome.model.display.CodomainMapContext.Details

Details(Object[]) - Constructor for class ome.model.display.CodomainMapContext.Details

details - Variable in class ome.model.display.ProjectionDef

DETAILS - Static variable in class ome.model.display.ProjectionDef

Details() - Constructor for class ome.model.display.ProjectionDef.Details

Details(Object[]) - Constructor for class ome.model.display.ProjectionDef.Details

details - Variable in class ome.model.display.QuantumDef

DETAILS - Static variable in class ome.model.display.QuantumDef

Details() - Constructor for class ome.model.display.QuantumDef.Details

Details(Object[]) - Constructor for class ome.model.display.QuantumDef.Details

details - Variable in class ome.model.display.RenderingDef

DETAILS - Static variable in class ome.model.display.RenderingDef

Details() - Constructor for class ome.model.display.RenderingDef.Details

Details(Object[]) - Constructor for class ome.model.display.RenderingDef.Details

details - Variable in class ome.model.display.Thumbnail

DETAILS - Static variable in class ome.model.display.Thumbnail

Details() - Constructor for class ome.model.display.Thumbnail.Details

Details(Object[]) - Constructor for class ome.model.display.Thumbnail.Details

details - Variable in class ome.model.enums.AcquisitionMode

DETAILS - Static variable in class ome.model.enums.AcquisitionMode

Details() - Constructor for class ome.model.enums.AcquisitionMode.Details

Details(Object[]) - Constructor for class ome.model.enums.AcquisitionMode.Details

details - Variable in class ome.model.enums.AdminPrivilege

DETAILS - Static variable in class ome.model.enums.AdminPrivilege

Details() - Constructor for class ome.model.enums.AdminPrivilege.Details

Details(Object[]) - Constructor for class ome.model.enums.AdminPrivilege.Details

details - Variable in class ome.model.enums.ArcType

DETAILS - Static variable in class ome.model.enums.ArcType

Details() - Constructor for class ome.model.enums.ArcType.Details

Details(Object[]) - Constructor for class ome.model.enums.ArcType.Details

details - Variable in class ome.model.enums.Binning

DETAILS - Static variable in class ome.model.enums.Binning

Details() - Constructor for class ome.model.enums.Binning.Details

Details(Object[]) - Constructor for class ome.model.enums.Binning.Details

details - Variable in class ome.model.enums.ChecksumAlgorithm

DETAILS - Static variable in class ome.model.enums.ChecksumAlgorithm

Details() - Constructor for class ome.model.enums.ChecksumAlgorithm.Details

Details(Object[]) - Constructor for class ome.model.enums.ChecksumAlgorithm.Details

details - Variable in class ome.model.enums.ContrastMethod

DETAILS - Static variable in class ome.model.enums.ContrastMethod

Details() - Constructor for class ome.model.enums.ContrastMethod.Details

Details(Object[]) - Constructor for class ome.model.enums.ContrastMethod.Details

details - Variable in class ome.model.enums.Correction

DETAILS - Static variable in class ome.model.enums.Correction

Details() - Constructor for class ome.model.enums.Correction.Details

Details(Object[]) - Constructor for class ome.model.enums.Correction.Details

details - Variable in class ome.model.enums.DetectorType

DETAILS - Static variable in class ome.model.enums.DetectorType

Details() - Constructor for class ome.model.enums.DetectorType.Details

Details(Object[]) - Constructor for class ome.model.enums.DetectorType.Details

details - Variable in class ome.model.enums.DimensionOrder

DETAILS - Static variable in class ome.model.enums.DimensionOrder

Details() - Constructor for class ome.model.enums.DimensionOrder.Details

Details(Object[]) - Constructor for class ome.model.enums.DimensionOrder.Details

details - Variable in class ome.model.enums.EventType

DETAILS - Static variable in class ome.model.enums.EventType

Details() - Constructor for class ome.model.enums.EventType.Details

Details(Object[]) - Constructor for class ome.model.enums.EventType.Details

details - Variable in class ome.model.enums.ExperimentType

DETAILS - Static variable in class ome.model.enums.ExperimentType

Details() - Constructor for class ome.model.enums.ExperimentType.Details

Details(Object[]) - Constructor for class ome.model.enums.ExperimentType.Details

details - Variable in class ome.model.enums.Family

DETAILS - Static variable in class ome.model.enums.Family

Details() - Constructor for class ome.model.enums.Family.Details

Details(Object[]) - Constructor for class ome.model.enums.Family.Details

details - Variable in class ome.model.enums.FilamentType

DETAILS - Static variable in class ome.model.enums.FilamentType

Details() - Constructor for class ome.model.enums.FilamentType.Details

Details(Object[]) - Constructor for class ome.model.enums.FilamentType.Details

details - Variable in class ome.model.enums.FilterType

DETAILS - Static variable in class ome.model.enums.FilterType

Details() - Constructor for class ome.model.enums.FilterType.Details

Details(Object[]) - Constructor for class ome.model.enums.FilterType.Details

details - Variable in class ome.model.enums.Format

DETAILS - Static variable in class ome.model.enums.Format

Details() - Constructor for class ome.model.enums.Format.Details

Details(Object[]) - Constructor for class ome.model.enums.Format.Details

details - Variable in class ome.model.enums.Illumination

DETAILS - Static variable in class ome.model.enums.Illumination

Details() - Constructor for class ome.model.enums.Illumination.Details

Details(Object[]) - Constructor for class ome.model.enums.Illumination.Details

details - Variable in class ome.model.enums.Immersion

DETAILS - Static variable in class ome.model.enums.Immersion

Details() - Constructor for class ome.model.enums.Immersion.Details

Details(Object[]) - Constructor for class ome.model.enums.Immersion.Details

details - Variable in class ome.model.enums.LaserMedium

DETAILS - Static variable in class ome.model.enums.LaserMedium

Details() - Constructor for class ome.model.enums.LaserMedium.Details

Details(Object[]) - Constructor for class ome.model.enums.LaserMedium.Details

details - Variable in class ome.model.enums.LaserType

DETAILS - Static variable in class ome.model.enums.LaserType

Details() - Constructor for class ome.model.enums.LaserType.Details

Details(Object[]) - Constructor for class ome.model.enums.LaserType.Details

details - Variable in class ome.model.enums.Medium

DETAILS - Static variable in class ome.model.enums.Medium

Details() - Constructor for class ome.model.enums.Medium.Details

Details(Object[]) - Constructor for class ome.model.enums.Medium.Details

details - Variable in class ome.model.enums.MicrobeamManipulationType

DETAILS - Static variable in class ome.model.enums.MicrobeamManipulationType

Details() - Constructor for class ome.model.enums.MicrobeamManipulationType.Details

Details(Object[]) - Constructor for class ome.model.enums.MicrobeamManipulationType.Details

details - Variable in class ome.model.enums.MicroscopeType

DETAILS - Static variable in class ome.model.enums.MicroscopeType

Details() - Constructor for class ome.model.enums.MicroscopeType.Details

Details(Object[]) - Constructor for class ome.model.enums.MicroscopeType.Details

details - Variable in class ome.model.enums.PhotometricInterpretation

DETAILS - Static variable in class ome.model.enums.PhotometricInterpretation

Details() - Constructor for class ome.model.enums.PhotometricInterpretation.Details

Details(Object[]) - Constructor for class ome.model.enums.PhotometricInterpretation.Details

details - Variable in class ome.model.enums.PixelsType

DETAILS - Static variable in class ome.model.enums.PixelsType

Details() - Constructor for class ome.model.enums.PixelsType.Details

Details(Object[]) - Constructor for class ome.model.enums.PixelsType.Details

details - Variable in class ome.model.enums.ProjectionAxis

DETAILS - Static variable in class ome.model.enums.ProjectionAxis

Details() - Constructor for class ome.model.enums.ProjectionAxis.Details

Details(Object[]) - Constructor for class ome.model.enums.ProjectionAxis.Details

details - Variable in class ome.model.enums.ProjectionType

DETAILS - Static variable in class ome.model.enums.ProjectionType

Details() - Constructor for class ome.model.enums.ProjectionType.Details

Details(Object[]) - Constructor for class ome.model.enums.ProjectionType.Details

details - Variable in class ome.model.enums.Pulse

DETAILS - Static variable in class ome.model.enums.Pulse

Details() - Constructor for class ome.model.enums.Pulse.Details

Details(Object[]) - Constructor for class ome.model.enums.Pulse.Details

details - Variable in class ome.model.enums.RenderingModel

DETAILS - Static variable in class ome.model.enums.RenderingModel

Details() - Constructor for class ome.model.enums.RenderingModel.Details

Details(Object[]) - Constructor for class ome.model.enums.RenderingModel.Details

details - Variable in class ome.model.experiment.Experiment

DETAILS - Static variable in class ome.model.experiment.Experiment

Details() - Constructor for class ome.model.experiment.Experiment.Details

Details(Object[]) - Constructor for class ome.model.experiment.Experiment.Details

details - Variable in class ome.model.experiment.MicrobeamManipulation

DETAILS - Static variable in class ome.model.experiment.MicrobeamManipulation

Details() - Constructor for class ome.model.experiment.MicrobeamManipulation.Details

Details(Object[]) - Constructor for class ome.model.experiment.MicrobeamManipulation.Details

details - Variable in class ome.model.fs.Fileset

DETAILS - Static variable in class ome.model.fs.Fileset

Details() - Constructor for class ome.model.fs.Fileset.Details

Details(Object[]) - Constructor for class ome.model.fs.Fileset.Details

details - Variable in class ome.model.fs.FilesetEntry

DETAILS - Static variable in class ome.model.fs.FilesetEntry

Details() - Constructor for class ome.model.fs.FilesetEntry.Details

Details(Object[]) - Constructor for class ome.model.fs.FilesetEntry.Details

details - Variable in class ome.model.fs.FilesetJobLink

DETAILS - Static variable in class ome.model.fs.FilesetJobLink

Details() - Constructor for class ome.model.fs.FilesetJobLink.Details

Details(Object[]) - Constructor for class ome.model.fs.FilesetJobLink.Details

Details - Class in ome.model.internal

value type for low-level (row-level) details for all IObject objects.

Details() - Constructor for class ome.model.internal.Details

default constructor.

Details(Object[]) - Constructor for class ome.model.internal.Details

Details(Details) - Constructor for class ome.model.internal.Details

copy-constructor

details - Variable in class ome.model.internal.Link

DETAILS - Static variable in class ome.model.internal.Link

Details() - Constructor for class ome.model.internal.Link.Details

Details(Object[]) - Constructor for class ome.model.internal.Link.Details

details - Variable in class ome.model.jobs.Job

DETAILS - Static variable in class ome.model.jobs.Job

Details() - Constructor for class ome.model.jobs.Job.Details

Details(Object[]) - Constructor for class ome.model.jobs.Job.Details

details - Variable in class ome.model.jobs.JobOriginalFileLink

DETAILS - Static variable in class ome.model.jobs.JobOriginalFileLink

Details() - Constructor for class ome.model.jobs.JobOriginalFileLink.Details

Details(Object[]) - Constructor for class ome.model.jobs.JobOriginalFileLink.Details

details - Variable in class ome.model.jobs.JobStatus

DETAILS - Static variable in class ome.model.jobs.JobStatus

Details() - Constructor for class ome.model.jobs.JobStatus.Details

Details(Object[]) - Constructor for class ome.model.jobs.JobStatus.Details

details - Variable in class ome.model.meta.DBPatch

DETAILS - Static variable in class ome.model.meta.DBPatch

Details() - Constructor for class ome.model.meta.DBPatch.Details

Details(Object[]) - Constructor for class ome.model.meta.DBPatch.Details

details - Variable in class ome.model.meta.Event

DETAILS - Static variable in class ome.model.meta.Event

Details() - Constructor for class ome.model.meta.Event.Details

Details(Object[]) - Constructor for class ome.model.meta.Event.Details

details - Variable in class ome.model.meta.EventLog

DETAILS - Static variable in class ome.model.meta.EventLog

Details() - Constructor for class ome.model.meta.EventLog.Details

Details(Object[]) - Constructor for class ome.model.meta.EventLog.Details

details - Variable in class ome.model.meta.Experimenter

DETAILS - Static variable in class ome.model.meta.Experimenter

Details() - Constructor for class ome.model.meta.Experimenter.Details

Details(Object[]) - Constructor for class ome.model.meta.Experimenter.Details

details - Variable in class ome.model.meta.ExperimenterGroup

DETAILS - Static variable in class ome.model.meta.ExperimenterGroup

Details() - Constructor for class ome.model.meta.ExperimenterGroup.Details

Details(Object[]) - Constructor for class ome.model.meta.ExperimenterGroup.Details

details - Variable in class ome.model.meta.ExternalInfo

DETAILS - Static variable in class ome.model.meta.ExternalInfo

Details() - Constructor for class ome.model.meta.ExternalInfo.Details

Details(Object[]) - Constructor for class ome.model.meta.ExternalInfo.Details

details - Variable in class ome.model.meta.GroupExperimenterMap

DETAILS - Static variable in class ome.model.meta.GroupExperimenterMap

Details() - Constructor for class ome.model.meta.GroupExperimenterMap.Details

Details(Object[]) - Constructor for class ome.model.meta.GroupExperimenterMap.Details

details - Variable in class ome.model.meta.Namespace

DETAILS - Static variable in class ome.model.meta.Namespace

Details() - Constructor for class ome.model.meta.Namespace.Details

Details(Object[]) - Constructor for class ome.model.meta.Namespace.Details

details - Variable in class ome.model.meta.Node

DETAILS - Static variable in class ome.model.meta.Node

Details() - Constructor for class ome.model.meta.Node.Details

Details(Object[]) - Constructor for class ome.model.meta.Node.Details

details - Variable in class ome.model.meta.Session

DETAILS - Static variable in class ome.model.meta.Session

Details() - Constructor for class ome.model.meta.Session.Details

Details(Object[]) - Constructor for class ome.model.meta.Session.Details

details - Variable in class ome.model.meta.ShareMember

DETAILS - Static variable in class ome.model.meta.ShareMember

Details() - Constructor for class ome.model.meta.ShareMember.Details

Details(Object[]) - Constructor for class ome.model.meta.ShareMember.Details

details - Variable in class ome.model.roi.AffineTransform

DETAILS - Static variable in class ome.model.roi.AffineTransform

Details() - Constructor for class ome.model.roi.AffineTransform.Details

Details(Object[]) - Constructor for class ome.model.roi.AffineTransform.Details

details - Variable in class ome.model.roi.Roi

DETAILS - Static variable in class ome.model.roi.Roi

Details() - Constructor for class ome.model.roi.Roi.Details

Details(Object[]) - Constructor for class ome.model.roi.Roi.Details

details - Variable in class ome.model.roi.Shape

DETAILS - Static variable in class ome.model.roi.Shape

Details() - Constructor for class ome.model.roi.Shape.Details

Details(Object[]) - Constructor for class ome.model.roi.Shape.Details

details - Variable in class ome.model.screen.Plate

DETAILS - Static variable in class ome.model.screen.Plate

Details() - Constructor for class ome.model.screen.Plate.Details

Details(Object[]) - Constructor for class ome.model.screen.Plate.Details

details - Variable in class ome.model.screen.PlateAcquisition

DETAILS - Static variable in class ome.model.screen.PlateAcquisition

Details() - Constructor for class ome.model.screen.PlateAcquisition.Details

Details(Object[]) - Constructor for class ome.model.screen.PlateAcquisition.Details

details - Variable in class ome.model.screen.Reagent

DETAILS - Static variable in class ome.model.screen.Reagent

Details() - Constructor for class ome.model.screen.Reagent.Details

Details(Object[]) - Constructor for class ome.model.screen.Reagent.Details

details - Variable in class ome.model.screen.Screen

DETAILS - Static variable in class ome.model.screen.Screen

Details() - Constructor for class ome.model.screen.Screen.Details

Details(Object[]) - Constructor for class ome.model.screen.Screen.Details

details - Variable in class ome.model.screen.ScreenPlateLink

DETAILS - Static variable in class ome.model.screen.ScreenPlateLink

Details() - Constructor for class ome.model.screen.ScreenPlateLink.Details

Details(Object[]) - Constructor for class ome.model.screen.ScreenPlateLink.Details

details - Variable in class ome.model.screen.Well

DETAILS - Static variable in class ome.model.screen.Well

Details() - Constructor for class ome.model.screen.Well.Details

Details(Object[]) - Constructor for class ome.model.screen.Well.Details

details - Variable in class ome.model.screen.WellReagentLink

DETAILS - Static variable in class ome.model.screen.WellReagentLink

Details() - Constructor for class ome.model.screen.WellReagentLink.Details

Details(Object[]) - Constructor for class ome.model.screen.WellReagentLink.Details

details - Variable in class ome.model.screen.WellSample

DETAILS - Static variable in class ome.model.screen.WellSample

Details() - Constructor for class ome.model.screen.WellSample.Details

Details(Object[]) - Constructor for class ome.model.screen.WellSample.Details

details - Variable in class ome.model.stats.StatsInfo

DETAILS - Static variable in class ome.model.stats.StatsInfo

Details() - Constructor for class ome.model.stats.StatsInfo.Details

Details(Object[]) - Constructor for class ome.model.stats.StatsInfo.Details

DetailsFieldBridge - Class in ome.util

Delegating FieldBridge which passes the "fieldBridge" bean from the "ome.model" Spring ApplicationContext all arguments.

DetailsFieldBridge() - Constructor for class ome.util.DetailsFieldBridge

Detector - Class in ome.model.acquisition

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Detector() - Constructor for class ome.model.acquisition.Detector

Detector(Long) - Constructor for class ome.model.acquisition.Detector

Detector(Long, boolean) - Constructor for class ome.model.acquisition.Detector

Main constructor.

Detector(DetectorType, Instrument) - Constructor for class ome.model.acquisition.Detector

detector - Variable in class ome.model.acquisition.DetectorSettings

DETECTOR - Static variable in class ome.model.acquisition.DetectorSettings

detector - Variable in class ome.model.acquisition.Instrument

DETECTOR - Static variable in class ome.model.acquisition.Instrument

Detector.Details - Class in ome.model.acquisition

DetectorAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

DetectorAnnotationLink() - Constructor for class ome.model.annotations.DetectorAnnotationLink

DetectorAnnotationLink(Long) - Constructor for class ome.model.annotations.DetectorAnnotationLink

DetectorAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.DetectorAnnotationLink

Main constructor.

DetectorAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.DetectorAnnotationLink

DetectorAnnotationLink.Details - Class in ome.model.annotations

DetectorSettings - Class in ome.model.acquisition

These filter definitions are used by the security system to eliminate non-readable objects from queries.

DetectorSettings() - Constructor for class ome.model.acquisition.DetectorSettings

DetectorSettings(Long) - Constructor for class ome.model.acquisition.DetectorSettings

DetectorSettings(Long, boolean) - Constructor for class ome.model.acquisition.DetectorSettings

Main constructor.

DetectorSettings(Detector) - Constructor for class ome.model.acquisition.DetectorSettings

detectorSettings - Variable in class ome.model.core.LogicalChannel

DETECTORSETTINGS - Static variable in class ome.model.core.LogicalChannel

DetectorSettings.Details - Class in ome.model.acquisition

DetectorType - Class in ome.model.enums

DetectorType() - Constructor for class ome.model.enums.DetectorType

DetectorType(Long) - Constructor for class ome.model.enums.DetectorType

DetectorType(Long, boolean) - Constructor for class ome.model.enums.DetectorType

Main constructor.

DetectorType(String) - Constructor for class ome.model.enums.DetectorType

DetectorType.Details - Class in ome.model.enums

Dichroic - Class in ome.model.acquisition

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Dichroic() - Constructor for class ome.model.acquisition.Dichroic

Dichroic(Long) - Constructor for class ome.model.acquisition.Dichroic

Dichroic(Long, boolean) - Constructor for class ome.model.acquisition.Dichroic

Main constructor.

Dichroic(Instrument) - Constructor for class ome.model.acquisition.Dichroic

dichroic - Variable in class ome.model.acquisition.FilterSet

DICHROIC - Static variable in class ome.model.acquisition.FilterSet

dichroic - Variable in class ome.model.acquisition.Instrument

DICHROIC - Static variable in class ome.model.acquisition.Instrument

dichroic - Variable in class ome.model.acquisition.LightPath

DICHROIC - Static variable in class ome.model.acquisition.LightPath

Dichroic.Details - Class in ome.model.acquisition

DichroicAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

DichroicAnnotationLink() - Constructor for class ome.model.annotations.DichroicAnnotationLink

DichroicAnnotationLink(Long) - Constructor for class ome.model.annotations.DichroicAnnotationLink

DichroicAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.DichroicAnnotationLink

Main constructor.

DichroicAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.DichroicAnnotationLink

DichroicAnnotationLink.Details - Class in ome.model.annotations

dimensionOrder - Variable in class ome.model.core.Pixels

DIMENSIONORDER - Static variable in class ome.model.core.Pixels

DimensionOrder - Class in ome.model.enums

DimensionOrder() - Constructor for class ome.model.enums.DimensionOrder

DimensionOrder(Long) - Constructor for class ome.model.enums.DimensionOrder

DimensionOrder(Long, boolean) - Constructor for class ome.model.enums.DimensionOrder

Main constructor.

DimensionOrder(String) - Constructor for class ome.model.enums.DimensionOrder

DimensionOrder.Details - Class in ome.model.enums

disassemble(Object) - Method in class ome.model.units.GenericEnumType

display - Variable in class ome.model.meta.Namespace

DISPLAY - Static variable in class ome.model.meta.Namespace

displayName - Variable in class ome.model.meta.Namespace

DISPLAYNAME - Static variable in class ome.model.meta.Namespace

dispose() - Method in class ome.util.PixelData

Attempt to free up any native memory resources associated with the data buffer.

doFilter(String, Object) - Method in class ome.util.ContextFilter

doFilter(String, Filterable) - Method in class ome.util.ContextFilter

doFilter(String, Collection) - Method in class ome.util.ContextFilter

DOUBLE - Static variable in class ome.util.PixelData

Identifies the type used to store pixel values.

DoubleAnnotation - Class in ome.model.annotations

DoubleAnnotation() - Constructor for class ome.model.annotations.DoubleAnnotation

DoubleAnnotation(Long) - Constructor for class ome.model.annotations.DoubleAnnotation

DoubleAnnotation(Long, boolean) - Constructor for class ome.model.annotations.DoubleAnnotation

Main constructor.

doubleValue - Variable in class ome.model.annotations.DoubleAnnotation

DOUBLEVALUE - Static variable in class ome.model.annotations.DoubleAnnotation

doUpdateRows(Serializable, PersistentCollection, SessionImplementor) - Method in class ome.util.CountCollectionPersister

down - Variable in class ome.model.meta.Node

DOWN - Static variable in class ome.model.meta.Node

DUMMY - Static variable in class ome.model.internal.Permissions

Marker object which can be set on objects to show that the Permissions instance given contains no value.

E

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.acquisition.Detector

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.acquisition.Dichroic

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.acquisition.Filter

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.acquisition.Instrument

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.acquisition.LightPath

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.acquisition.LightSource

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.acquisition.Objective

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.annotations.Annotation

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.containers.Dataset

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.containers.Folder

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.containers.Project

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.core.Channel

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.core.OriginalFile

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.core.PlaneInfo

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.fs.Fileset

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in interface ome.model.IAnnotated

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.meta.Experimenter

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.meta.ExperimenterGroup

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.meta.Namespace

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.meta.Node

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.meta.Session

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.roi.Roi

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.roi.Shape

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.screen.Plate

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.screen.PlateAcquisition

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.screen.Reagent

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.screen.Screen

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedAnnotation(CBlock<E>) - Method in class ome.model.screen.Well

takes a CBlock and calls the block once for each ome.model.annotations.Annotation while collecting the results.

eachLinkedDataset(CBlock<E>) - Method in class ome.model.containers.Project

takes a CBlock and calls the block once for each ome.model.containers.Dataset while collecting the results.

eachLinkedDataset(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.containers.Dataset while collecting the results.

eachLinkedEmissionFilter(CBlock<E>) - Method in class ome.model.acquisition.Filter

takes a CBlock and calls the block once for each ome.model.acquisition.FilterSet while collecting the results.

eachLinkedEmissionFilter(CBlock<E>) - Method in class ome.model.acquisition.FilterSet

takes a CBlock and calls the block once for each ome.model.acquisition.Filter while collecting the results.

eachLinkedEmissionFilter(CBlock<E>) - Method in class ome.model.acquisition.LightPath

takes a CBlock and calls the block once for each ome.model.acquisition.Filter while collecting the results.

eachLinkedExcitationFilter(CBlock<E>) - Method in class ome.model.acquisition.Filter

takes a CBlock and calls the block once for each ome.model.acquisition.FilterSet while collecting the results.

eachLinkedExcitationFilter(CBlock<E>) - Method in class ome.model.acquisition.FilterSet

takes a CBlock and calls the block once for each ome.model.acquisition.Filter while collecting the results.

eachLinkedExcitationFilter(CBlock<E>) - Method in class ome.model.acquisition.LightPath

takes a CBlock and calls the block once for each ome.model.acquisition.Filter while collecting the results.

eachLinkedExperimenter(CBlock<E>) - Method in class ome.model.meta.ExperimenterGroup

takes a CBlock and calls the block once for each ome.model.meta.Experimenter while collecting the results.

eachLinkedExperimenterGroup(CBlock<E>) - Method in class ome.model.meta.Experimenter

takes a CBlock and calls the block once for each ome.model.meta.ExperimenterGroup while collecting the results.

eachLinkedFolder(CBlock<E>) - Method in class ome.model.core.Image

takes a CBlock and calls the block once for each ome.model.containers.Folder while collecting the results.

eachLinkedFolder(CBlock<E>) - Method in class ome.model.roi.Roi

takes a CBlock and calls the block once for each ome.model.containers.Folder while collecting the results.

eachLinkedImage(CBlock<E>) - Method in class ome.model.containers.Dataset

takes a CBlock and calls the block once for each ome.model.core.Image while collecting the results.

eachLinkedImage(CBlock<E>) - Method in class ome.model.containers.Folder

takes a CBlock and calls the block once for each ome.model.core.Image while collecting the results.

eachLinkedJob(CBlock<E>) - Method in class ome.model.fs.Fileset

takes a CBlock and calls the block once for each ome.model.jobs.Job while collecting the results.

eachLinkedOriginalFile(CBlock<E>) - Method in class ome.model.core.Pixels

takes a CBlock and calls the block once for each ome.model.core.OriginalFile while collecting the results.

eachLinkedOriginalFile(CBlock<E>) - Method in class ome.model.jobs.Job

takes a CBlock and calls the block once for each ome.model.core.OriginalFile while collecting the results.

eachLinkedPixels(CBlock<E>) - Method in class ome.model.core.OriginalFile

takes a CBlock and calls the block once for each ome.model.core.Pixels while collecting the results.

eachLinkedPlate(CBlock<E>) - Method in class ome.model.screen.Screen

takes a CBlock and calls the block once for each ome.model.screen.Plate while collecting the results.

eachLinkedProject(CBlock<E>) - Method in class ome.model.containers.Dataset

takes a CBlock and calls the block once for each ome.model.containers.Project while collecting the results.

eachLinkedReagent(CBlock<E>) - Method in class ome.model.screen.Well

takes a CBlock and calls the block once for each ome.model.screen.Reagent while collecting the results.

eachLinkedRoi(CBlock<E>) - Method in class ome.model.containers.Folder

takes a CBlock and calls the block once for each ome.model.roi.Roi while collecting the results.

eachLinkedScreen(CBlock<E>) - Method in class ome.model.screen.Plate

takes a CBlock and calls the block once for each ome.model.screen.Screen while collecting the results.

eachLinkedWell(CBlock<E>) - Method in class ome.model.screen.Reagent

takes a CBlock and calls the block once for each ome.model.screen.Well while collecting the results.

EDITRESTRICTION - Static variable in class ome.model.internal.Permissions

ElectricPotential - Class in ome.model.units

class storing both a ElectricPotential and a unit for that ElectricPotential (e.g.

ElectricPotential() - Constructor for class ome.model.units.ElectricPotential

Deprecated.

ElectricPotential(double, String) - Constructor for class ome.model.units.ElectricPotential

ElectricPotential(double, UnitsElectricPotential) - Constructor for class ome.model.units.ElectricPotential

ElectricPotential(double, Unit<ElectricPotential>) - Constructor for class ome.model.units.ElectricPotential

ElectricPotential(ElectricPotential) - Constructor for class ome.model.units.ElectricPotential

Ellipse - Class in ome.model.roi

Ellipse() - Constructor for class ome.model.roi.Ellipse

Ellipse(Long) - Constructor for class ome.model.roi.Ellipse

Ellipse(Long, boolean) - Constructor for class ome.model.roi.Ellipse

Main constructor.

email - Variable in class ome.model.meta.Experimenter

EMAIL - Static variable in class ome.model.meta.Experimenter

emissionFilterLink - Variable in class ome.model.acquisition.Filter

EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.Filter

emissionFilterLink - Variable in class ome.model.acquisition.FilterSet

EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.FilterSet

emissionFilterLink - Variable in class ome.model.acquisition.LightPath

EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.LightPath

EMISSIONFILTERLINKCOUNTPEROWNER - Static variable in class ome.model.acquisition.Filter

EMISSIONFILTERLINKCOUNTPEROWNER - Static variable in class ome.model.acquisition.FilterSet

EMISSIONFILTERLINKCOUNTPEROWNER - Static variable in class ome.model.acquisition.LightPath

emissionWave - Variable in class ome.model.core.LogicalChannel

EMISSIONWAVE - Static variable in class ome.model.core.LogicalChannel

EMPTY - Static variable in class ome.model.internal.Permissions

an immutable Permissions instance with all rights turned off.

EmptyIterator<E> - Class in ome.util

utility iterator which does nothing as quickly as possible.

EmptyIterator() - Constructor for class ome.util.EmptyIterator

endPlane - Variable in class ome.model.display.ProjectionDef

ENDPLANE - Static variable in class ome.model.display.ProjectionDef

endTime - Variable in class ome.model.screen.PlateAcquisition

ENDTIME - Static variable in class ome.model.screen.PlateAcquisition

endTime - Variable in class ome.parameters.Filter

endTime(Timestamp) - Method in class ome.parameters.Parameters

enter(Object) - Method in class ome.util.ContextFilter

entityId - Variable in class ome.model.meta.EventLog

ENTITYID - Static variable in class ome.model.meta.EventLog

entityId - Variable in class ome.model.meta.ExternalInfo

ENTITYID - Static variable in class ome.model.meta.ExternalInfo

entityType - Variable in class ome.model.meta.EventLog

ENTITYTYPE - Static variable in class ome.model.meta.EventLog

entityType - Variable in class ome.model.meta.ExternalInfo

ENTITYTYPE - Static variable in class ome.model.meta.ExternalInfo

entry(String, Object) - Method in class ome.util.RdfPrinter

equals(Object) - Method in class ome.model.enums.AcquisitionMode

equals(Object) - Method in class ome.model.enums.AdminPrivilege

equals(Object) - Method in class ome.model.enums.ArcType

equals(Object) - Method in class ome.model.enums.Binning

equals(Object) - Method in class ome.model.enums.ChecksumAlgorithm

equals(Object) - Method in class ome.model.enums.ContrastMethod

equals(Object) - Method in class ome.model.enums.Correction

equals(Object) - Method in class ome.model.enums.DetectorType

equals(Object) - Method in class ome.model.enums.DimensionOrder

equals(Object) - Method in class ome.model.enums.EventType

equals(Object) - Method in class ome.model.enums.ExperimentType

equals(Object) - Method in class ome.model.enums.Family

equals(Object) - Method in class ome.model.enums.FilamentType

equals(Object) - Method in class ome.model.enums.FilterType

equals(Object) - Method in class ome.model.enums.Format

equals(Object) - Method in class ome.model.enums.Illumination

equals(Object) - Method in class ome.model.enums.Immersion

equals(Object) - Method in class ome.model.enums.LaserMedium

equals(Object) - Method in class ome.model.enums.LaserType

equals(Object) - Method in class ome.model.enums.Medium

equals(Object) - Method in class ome.model.enums.MicrobeamManipulationType

equals(Object) - Method in class ome.model.enums.MicroscopeType

equals(Object) - Method in class ome.model.enums.PhotometricInterpretation

equals(Object) - Method in class ome.model.enums.PixelsType

equals(Object) - Method in class ome.model.enums.ProjectionAxis

equals(Object) - Method in class ome.model.enums.ProjectionType

equals(Object) - Method in class ome.model.enums.Pulse

equals(Object) - Method in class ome.model.enums.RenderingModel

equals(Object) - Method in class ome.model.internal.NamedValue

equals(Object) - Method in class ome.model.jobs.JobStatus

equals(Object) - Method in class ome.model.units.ElectricPotential

equals(Object) - Method in class ome.model.units.Frequency

equals(Object, Object) - Method in class ome.model.units.GenericEnumType

equals(Object) - Method in class ome.model.units.Length

equals(Object) - Method in class ome.model.units.Power

equals(Object) - Method in class ome.model.units.Pressure

equals(Object) - Method in class ome.model.units.Temperature

equals(Object) - Method in class ome.model.units.Time

equals(Object) - Method in class ome.parameters.QueryParameter

equals(Object) - Method in class ome.util.LSID

errorIfUnloaded() - Method in class ome.model.acquisition.Detector

errorIfUnloaded() - Method in class ome.model.acquisition.DetectorSettings

errorIfUnloaded() - Method in class ome.model.acquisition.Dichroic

errorIfUnloaded() - Method in class ome.model.acquisition.Filter

errorIfUnloaded() - Method in class ome.model.acquisition.FilterSet

errorIfUnloaded() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink

errorIfUnloaded() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink

errorIfUnloaded() - Method in class ome.model.acquisition.ImagingEnvironment

errorIfUnloaded() - Method in class ome.model.acquisition.Instrument

errorIfUnloaded() - Method in class ome.model.acquisition.LightPath

errorIfUnloaded() - Method in class ome.model.acquisition.LightPathEmissionFilterLink

errorIfUnloaded() - Method in class ome.model.acquisition.LightPathExcitationFilterLink

errorIfUnloaded() - Method in class ome.model.acquisition.LightSettings

errorIfUnloaded() - Method in class ome.model.acquisition.LightSource

errorIfUnloaded() - Method in class ome.model.acquisition.Microscope

errorIfUnloaded() - Method in class ome.model.acquisition.Objective

errorIfUnloaded() - Method in class ome.model.acquisition.ObjectiveSettings

errorIfUnloaded() - Method in class ome.model.acquisition.OTF

errorIfUnloaded() - Method in class ome.model.acquisition.StageLabel

errorIfUnloaded() - Method in class ome.model.acquisition.TransmittanceRange

errorIfUnloaded() - Method in class ome.model.annotations.Annotation

errorIfUnloaded() - Method in class ome.model.annotations.AnnotationAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ChannelAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.DatasetAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.DetectorAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.DichroicAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ExperimenterAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.FilesetAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.FilterAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.FolderAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ImageAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.InstrumentAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.LightPathAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.LightSourceAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.NamespaceAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.NodeAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ObjectiveAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.OriginalFileAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.PlaneInfoAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.PlateAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ProjectAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ReagentAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.RoiAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ScreenAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.SessionAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.ShapeAnnotationLink

errorIfUnloaded() - Method in class ome.model.annotations.WellAnnotationLink

errorIfUnloaded() - Method in class ome.model.containers.Dataset

errorIfUnloaded() - Method in class ome.model.containers.DatasetImageLink

errorIfUnloaded() - Method in class ome.model.containers.Folder

errorIfUnloaded() - Method in class ome.model.containers.FolderImageLink

errorIfUnloaded() - Method in class ome.model.containers.FolderRoiLink

errorIfUnloaded() - Method in class ome.model.containers.Project

errorIfUnloaded() - Method in class ome.model.containers.ProjectDatasetLink

errorIfUnloaded() - Method in class ome.model.core.Channel

errorIfUnloaded() - Method in class ome.model.core.Image

errorIfUnloaded() - Method in class ome.model.core.LogicalChannel

errorIfUnloaded() - Method in class ome.model.core.OriginalFile

errorIfUnloaded() - Method in class ome.model.core.Pixels

errorIfUnloaded() - Method in class ome.model.core.PixelsOriginalFileMap

errorIfUnloaded() - Method in class ome.model.core.PlaneInfo

errorIfUnloaded() - Method in class ome.model.display.ChannelBinding

errorIfUnloaded() - Method in class ome.model.display.CodomainMapContext

errorIfUnloaded() - Method in class ome.model.display.ProjectionDef

errorIfUnloaded() - Method in class ome.model.display.QuantumDef

errorIfUnloaded() - Method in class ome.model.display.RenderingDef

errorIfUnloaded() - Method in class ome.model.display.Thumbnail

errorIfUnloaded() - Method in class ome.model.enums.AcquisitionMode

errorIfUnloaded() - Method in class ome.model.enums.AdminPrivilege

errorIfUnloaded() - Method in class ome.model.enums.ArcType

errorIfUnloaded() - Method in class ome.model.enums.Binning

errorIfUnloaded() - Method in class ome.model.enums.ChecksumAlgorithm

errorIfUnloaded() - Method in class ome.model.enums.ContrastMethod

errorIfUnloaded() - Method in class ome.model.enums.Correction

errorIfUnloaded() - Method in class ome.model.enums.DetectorType

errorIfUnloaded() - Method in class ome.model.enums.DimensionOrder

errorIfUnloaded() - Method in class ome.model.enums.EventType

errorIfUnloaded() - Method in class ome.model.enums.ExperimentType

errorIfUnloaded() - Method in class ome.model.enums.Family

errorIfUnloaded() - Method in class ome.model.enums.FilamentType

errorIfUnloaded() - Method in class ome.model.enums.FilterType

errorIfUnloaded() - Method in class ome.model.enums.Format

errorIfUnloaded() - Method in class ome.model.enums.Illumination

errorIfUnloaded() - Method in class ome.model.enums.Immersion

errorIfUnloaded() - Method in class ome.model.enums.LaserMedium

errorIfUnloaded() - Method in class ome.model.enums.LaserType

errorIfUnloaded() - Method in class ome.model.enums.Medium

errorIfUnloaded() - Method in class ome.model.enums.MicrobeamManipulationType

errorIfUnloaded() - Method in class ome.model.enums.MicroscopeType

errorIfUnloaded() - Method in class ome.model.enums.PhotometricInterpretation

errorIfUnloaded() - Method in class ome.model.enums.PixelsType

errorIfUnloaded() - Method in class ome.model.enums.ProjectionAxis

errorIfUnloaded() - Method in class ome.model.enums.ProjectionType

errorIfUnloaded() - Method in class ome.model.enums.Pulse

errorIfUnloaded() - Method in class ome.model.enums.RenderingModel

errorIfUnloaded() - Method in class ome.model.experiment.Experiment

errorIfUnloaded() - Method in class ome.model.experiment.MicrobeamManipulation

errorIfUnloaded() - Method in class ome.model.fs.Fileset

errorIfUnloaded() - Method in class ome.model.fs.FilesetEntry

errorIfUnloaded() - Method in class ome.model.fs.FilesetJobLink

errorIfUnloaded() - Method in class ome.model.internal.Link

errorIfUnloaded() - Method in class ome.model.jobs.Job

errorIfUnloaded() - Method in class ome.model.jobs.JobOriginalFileLink

errorIfUnloaded() - Method in class ome.model.jobs.JobStatus

errorIfUnloaded() - Method in class ome.model.meta.DBPatch

errorIfUnloaded() - Method in class ome.model.meta.Event

errorIfUnloaded() - Method in class ome.model.meta.EventLog

errorIfUnloaded() - Method in class ome.model.meta.Experimenter

errorIfUnloaded() - Method in class ome.model.meta.ExperimenterGroup

errorIfUnloaded() - Method in class ome.model.meta.ExternalInfo

errorIfUnloaded() - Method in class ome.model.meta.GroupExperimenterMap

errorIfUnloaded() - Method in class ome.model.meta.Namespace

errorIfUnloaded() - Method in class ome.model.meta.Node

errorIfUnloaded() - Method in class ome.model.meta.Session

errorIfUnloaded() - Method in class ome.model.meta.ShareMember

errorIfUnloaded() - Method in class ome.model.roi.AffineTransform

errorIfUnloaded() - Method in class ome.model.roi.Roi

errorIfUnloaded() - Method in class ome.model.roi.Shape

errorIfUnloaded() - Method in class ome.model.screen.Plate

errorIfUnloaded() - Method in class ome.model.screen.PlateAcquisition

errorIfUnloaded() - Method in class ome.model.screen.Reagent

errorIfUnloaded() - Method in class ome.model.screen.Screen

errorIfUnloaded() - Method in class ome.model.screen.ScreenPlateLink

errorIfUnloaded() - Method in class ome.model.screen.Well

errorIfUnloaded() - Method in class ome.model.screen.WellReagentLink

errorIfUnloaded() - Method in class ome.model.screen.WellSample

errorIfUnloaded() - Method in class ome.model.stats.StatsInfo

Event - Class in ome.model.meta

Event() - Constructor for class ome.model.meta.Event

Event(Long) - Constructor for class ome.model.meta.Event

Event(Long, boolean) - Constructor for class ome.model.meta.Event

Main constructor.

Event(Timestamp, Experimenter, ExperimenterGroup, EventType, Session) - Constructor for class ome.model.meta.Event

event - Variable in class ome.model.meta.EventLog

EVENT - Static variable in class ome.model.meta.EventLog

Event.Details - Class in ome.model.meta

event2timestamp(Event) - Method in class ome.util.ModelMapper

EVENT_FILTER - Static variable in class ome.model.acquisition.Arc

EVENT_FILTER - Static variable in class ome.model.acquisition.Detector

EVENT_FILTER - Static variable in class ome.model.acquisition.DetectorSettings

EVENT_FILTER - Static variable in class ome.model.acquisition.Dichroic

EVENT_FILTER - Static variable in class ome.model.acquisition.Filament

EVENT_FILTER - Static variable in class ome.model.acquisition.Filter

EVENT_FILTER - Static variable in class ome.model.acquisition.FilterSet

EVENT_FILTER - Static variable in class ome.model.acquisition.FilterSetEmissionFilterLink

EVENT_FILTER - Static variable in class ome.model.acquisition.FilterSetExcitationFilterLink

EVENT_FILTER - Static variable in class ome.model.acquisition.GenericExcitationSource

EVENT_FILTER - Static variable in class ome.model.acquisition.ImagingEnvironment

EVENT_FILTER - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER - Static variable in class ome.model.acquisition.Laser

EVENT_FILTER - Static variable in class ome.model.acquisition.LightEmittingDiode

EVENT_FILTER - Static variable in class ome.model.acquisition.LightPath

EVENT_FILTER - Static variable in class ome.model.acquisition.LightPathEmissionFilterLink

EVENT_FILTER - Static variable in class ome.model.acquisition.LightPathExcitationFilterLink

EVENT_FILTER - Static variable in class ome.model.acquisition.LightSettings

EVENT_FILTER - Static variable in class ome.model.acquisition.LightSource

EVENT_FILTER - Static variable in class ome.model.acquisition.Microscope

EVENT_FILTER - Static variable in class ome.model.acquisition.Objective

EVENT_FILTER - Static variable in class ome.model.acquisition.ObjectiveSettings

EVENT_FILTER - Static variable in class ome.model.acquisition.OTF

EVENT_FILTER - Static variable in class ome.model.acquisition.StageLabel

EVENT_FILTER - Static variable in class ome.model.acquisition.TransmittanceRange

EVENT_FILTER - Static variable in class ome.model.annotations.Annotation

EVENT_FILTER - Static variable in class ome.model.annotations.AnnotationAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.BasicAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.BooleanAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.ChannelAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.CommentAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.DatasetAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.DetectorAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.DichroicAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.DoubleAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.ExperimenterAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.ExperimenterGroupAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.FileAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.FilesetAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.FilterAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.FolderAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.ImageAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.InstrumentAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.LightPathAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.LightSourceAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.ListAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.LongAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.MapAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.NamespaceAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.NodeAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.NumericAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.ObjectiveAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.OriginalFileAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.PlaneInfoAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.PlateAcquisitionAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.PlateAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.ProjectAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.ReagentAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.RoiAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.ScreenAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.SessionAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.ShapeAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.TagAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.TermAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.TextAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.TimestampAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.TypeAnnotation

EVENT_FILTER - Static variable in class ome.model.annotations.WellAnnotationLink

EVENT_FILTER - Static variable in class ome.model.annotations.XmlAnnotation

EVENT_FILTER - Static variable in class ome.model.containers.Dataset

EVENT_FILTER - Static variable in class ome.model.containers.DatasetImageLink

EVENT_FILTER - Static variable in class ome.model.containers.Folder

EVENT_FILTER - Static variable in class ome.model.containers.FolderImageLink

EVENT_FILTER - Static variable in class ome.model.containers.FolderRoiLink

EVENT_FILTER - Static variable in class ome.model.containers.Project

EVENT_FILTER - Static variable in class ome.model.containers.ProjectDatasetLink

EVENT_FILTER - Static variable in class ome.model.core.Channel

EVENT_FILTER - Static variable in class ome.model.core.Image

EVENT_FILTER - Static variable in class ome.model.core.LogicalChannel

EVENT_FILTER - Static variable in class ome.model.core.OriginalFile

EVENT_FILTER - Static variable in class ome.model.core.Pixels

EVENT_FILTER - Static variable in class ome.model.core.PixelsOriginalFileMap

EVENT_FILTER - Static variable in class ome.model.core.PlaneInfo

EVENT_FILTER - Static variable in class ome.model.display.ChannelBinding

EVENT_FILTER - Static variable in class ome.model.display.CodomainMapContext

EVENT_FILTER - Static variable in class ome.model.display.ContrastStretchingContext

EVENT_FILTER - Static variable in class ome.model.display.PlaneSlicingContext

EVENT_FILTER - Static variable in class ome.model.display.ProjectionDef

EVENT_FILTER - Static variable in class ome.model.display.QuantumDef

EVENT_FILTER - Static variable in class ome.model.display.RenderingDef

EVENT_FILTER - Static variable in class ome.model.display.ReverseIntensityContext

EVENT_FILTER - Static variable in class ome.model.display.Thumbnail

EVENT_FILTER - Static variable in class ome.model.experiment.Experiment

EVENT_FILTER - Static variable in class ome.model.experiment.MicrobeamManipulation

EVENT_FILTER - Static variable in class ome.model.fs.Fileset

EVENT_FILTER - Static variable in class ome.model.fs.FilesetEntry

EVENT_FILTER - Static variable in class ome.model.fs.FilesetJobLink

EVENT_FILTER - Static variable in class ome.model.internal.Link

EVENT_FILTER - Static variable in class ome.model.jobs.ImportJob

Deprecated.

EVENT_FILTER - Static variable in class ome.model.jobs.IndexingJob

EVENT_FILTER - Static variable in class ome.model.jobs.IntegrityCheckJob

EVENT_FILTER - Static variable in class ome.model.jobs.Job

EVENT_FILTER - Static variable in class ome.model.jobs.JobOriginalFileLink

EVENT_FILTER - Static variable in class ome.model.jobs.MetadataImportJob

EVENT_FILTER - Static variable in class ome.model.jobs.ParseJob

EVENT_FILTER - Static variable in class ome.model.jobs.PixelDataJob

EVENT_FILTER - Static variable in class ome.model.jobs.ScriptJob

EVENT_FILTER - Static variable in class ome.model.jobs.ThumbnailGenerationJob

EVENT_FILTER - Static variable in class ome.model.jobs.UploadJob

EVENT_FILTER - Static variable in class ome.model.meta.ExternalInfo

EVENT_FILTER - Static variable in class ome.model.roi.AffineTransform

EVENT_FILTER - Static variable in class ome.model.roi.Ellipse

EVENT_FILTER - Static variable in class ome.model.roi.Label

EVENT_FILTER - Static variable in class ome.model.roi.Line

EVENT_FILTER - Static variable in class ome.model.roi.Mask

EVENT_FILTER - Static variable in class ome.model.roi.Path

Deprecated.

EVENT_FILTER - Static variable in class ome.model.roi.Point

EVENT_FILTER - Static variable in class ome.model.roi.Polygon

EVENT_FILTER - Static variable in class ome.model.roi.Polyline

EVENT_FILTER - Static variable in class ome.model.roi.Rectangle

EVENT_FILTER - Static variable in class ome.model.roi.Roi

EVENT_FILTER - Static variable in class ome.model.roi.Shape

EVENT_FILTER - Static variable in class ome.model.screen.Plate

EVENT_FILTER - Static variable in class ome.model.screen.PlateAcquisition

EVENT_FILTER - Static variable in class ome.model.screen.Reagent

EVENT_FILTER - Static variable in class ome.model.screen.Screen

EVENT_FILTER - Static variable in class ome.model.screen.ScreenPlateLink

EVENT_FILTER - Static variable in class ome.model.screen.Well

EVENT_FILTER - Static variable in class ome.model.screen.WellReagentLink

EVENT_FILTER - Static variable in class ome.model.screen.WellSample

EVENT_FILTER - Static variable in class ome.model.stats.StatsInfo

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Detector

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Dichroic

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Filter

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.LightPath

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.LightSource

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Objective

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.annotations.Annotation

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.containers.Dataset

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.containers.Folder

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.containers.Project

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.core.Channel

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.core.Image

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.core.OriginalFile

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.core.PlaneInfo

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.fs.Fileset

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.Experimenter

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.ExperimenterGroup

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.Namespace

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.Node

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.Session

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.roi.Roi

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.roi.Shape

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.Plate

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.PlateAcquisition

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.Reagent

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.Screen

EVENT_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.Well

EVENT_FILTER_CHANNELS - Static variable in class ome.model.core.LogicalChannel

EVENT_FILTER_CHANNELS - Static variable in class ome.model.core.Pixels

EVENT_FILTER_CHILDFOLDERS - Static variable in class ome.model.containers.Folder

EVENT_FILTER_DATASETLINKS - Static variable in class ome.model.containers.Project

EVENT_FILTER_DATASETLINKS - Static variable in class ome.model.core.Image

EVENT_FILTER_DETECTOR - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER_DICHROIC - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER_EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.Filter

EVENT_FILTER_EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.FilterSet

EVENT_FILTER_EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.LightPath

EVENT_FILTER_EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.Filter

EVENT_FILTER_EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.FilterSet

EVENT_FILTER_EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.LightPath

EVENT_FILTER_FILESETENTRIES - Static variable in class ome.model.core.OriginalFile

EVENT_FILTER_FILTER - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER_FILTERSET - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER_FOLDERLINKS - Static variable in class ome.model.core.Image

EVENT_FILTER_FOLDERLINKS - Static variable in class ome.model.roi.Roi

EVENT_FILTER_IMAGELINKS - Static variable in class ome.model.containers.Dataset

EVENT_FILTER_IMAGELINKS - Static variable in class ome.model.containers.Folder

EVENT_FILTER_IMAGES - Static variable in class ome.model.fs.Fileset

EVENT_FILTER_JOBLINKS - Static variable in class ome.model.fs.Fileset

EVENT_FILTER_LIGHTSOURCE - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER_LIGHTSOURCESETTINGS - Static variable in class ome.model.experiment.MicrobeamManipulation

EVENT_FILTER_MICROBEAMMANIPULATION - Static variable in class ome.model.experiment.Experiment

EVENT_FILTER_OBJECTIVE - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER_ORIGINALFILELINKS - Static variable in class ome.model.jobs.Job

EVENT_FILTER_OTF - Static variable in class ome.model.acquisition.Instrument

EVENT_FILTER_PIXELS - Static variable in class ome.model.core.Image

EVENT_FILTER_PIXELSFILEMAPS - Static variable in class ome.model.core.OriginalFile

EVENT_FILTER_PIXELSFILEMAPS - Static variable in class ome.model.core.Pixels

EVENT_FILTER_PLANEINFO - Static variable in class ome.model.core.Pixels

EVENT_FILTER_PLATEACQUISITIONS - Static variable in class ome.model.screen.Plate

EVENT_FILTER_PLATELINKS - Static variable in class ome.model.screen.Screen

EVENT_FILTER_PROJECTIONS - Static variable in class ome.model.display.RenderingDef

EVENT_FILTER_PROJECTLINKS - Static variable in class ome.model.containers.Dataset

EVENT_FILTER_REAGENTLINKS - Static variable in class ome.model.screen.Well

EVENT_FILTER_REAGENTS - Static variable in class ome.model.screen.Screen

EVENT_FILTER_ROILINKS - Static variable in class ome.model.containers.Folder

EVENT_FILTER_ROIS - Static variable in class ome.model.core.Image

EVENT_FILTER_SCREENLINKS - Static variable in class ome.model.screen.Plate

EVENT_FILTER_SETTINGS - Static variable in class ome.model.core.Pixels

EVENT_FILTER_SHAPES - Static variable in class ome.model.roi.Roi

EVENT_FILTER_SPATIALDOMAINENHANCEMENT - Static variable in class ome.model.display.ChannelBinding

EVENT_FILTER_THUMBNAILS - Static variable in class ome.model.core.Pixels

EVENT_FILTER_USEDFILES - Static variable in class ome.model.fs.Fileset

EVENT_FILTER_WAVERENDERING - Static variable in class ome.model.display.RenderingDef

EVENT_FILTER_WELLLINKS - Static variable in class ome.model.screen.Reagent

EVENT_FILTER_WELLS - Static variable in class ome.model.screen.Plate

EVENT_FILTER_WELLSAMPLE - Static variable in class ome.model.screen.PlateAcquisition

EVENT_FILTER_WELLSAMPLES - Static variable in class ome.model.core.Image

EVENT_FILTER_WELLSAMPLES - Static variable in class ome.model.screen.Well

eventId - Variable in class ome.util.SqlAction.DeleteLog

EventLog - Class in ome.model.meta

EventLog() - Constructor for class ome.model.meta.EventLog

EventLog(Long) - Constructor for class ome.model.meta.EventLog

EventLog(Long, boolean) - Constructor for class ome.model.meta.EventLog

Main constructor.

EventLog(Long, String, String, Event) - Constructor for class ome.model.meta.EventLog

EventLog.Details - Class in ome.model.meta

events - Variable in class ome.model.meta.Session

EVENTS - Static variable in class ome.model.meta.Session

EventType - Class in ome.model.enums

EventType() - Constructor for class ome.model.enums.EventType

EventType(Long) - Constructor for class ome.model.enums.EventType

EventType(Long, boolean) - Constructor for class ome.model.enums.EventType

Main constructor.

EventType(String) - Constructor for class ome.model.enums.EventType

EventType.Details - Class in ome.model.enums

excitationFilterLink - Variable in class ome.model.acquisition.Filter

EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.Filter

excitationFilterLink - Variable in class ome.model.acquisition.FilterSet

EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.FilterSet

excitationFilterLink - Variable in class ome.model.acquisition.LightPath

EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.LightPath

EXCITATIONFILTERLINKCOUNTPEROWNER - Static variable in class ome.model.acquisition.Filter

EXCITATIONFILTERLINKCOUNTPEROWNER - Static variable in class ome.model.acquisition.FilterSet

EXCITATIONFILTERLINKCOUNTPEROWNER - Static variable in class ome.model.acquisition.LightPath

excitationWave - Variable in class ome.model.core.LogicalChannel

EXCITATIONWAVE - Static variable in class ome.model.core.LogicalChannel

exit(Object) - Method in class ome.util.ContextFilter

exp(long) - Method in class ome.parameters.Parameters

experiment - Variable in class ome.model.core.Image

EXPERIMENT - Static variable in class ome.model.core.Image

Experiment - Class in ome.model.experiment

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Experiment() - Constructor for class ome.model.experiment.Experiment

Experiment(Long) - Constructor for class ome.model.experiment.Experiment

Experiment(Long, boolean) - Constructor for class ome.model.experiment.Experiment

Main constructor.

Experiment(ExperimentType) - Constructor for class ome.model.experiment.Experiment

experiment - Variable in class ome.model.experiment.MicrobeamManipulation

EXPERIMENT - Static variable in class ome.model.experiment.MicrobeamManipulation

Experiment.Details - Class in ome.model.experiment

experimenter - Variable in class ome.model.meta.Event

EXPERIMENTER - Static variable in class ome.model.meta.Event

Experimenter - Class in ome.model.meta

Experimenter() - Constructor for class ome.model.meta.Experimenter

Experimenter(Long) - Constructor for class ome.model.meta.Experimenter

Experimenter(Long, boolean) - Constructor for class ome.model.meta.Experimenter

Main constructor.

Experimenter(String, String, String, Boolean) - Constructor for class ome.model.meta.Experimenter

Experimenter.Details - Class in ome.model.meta

ExperimenterAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

ExperimenterAnnotationLink() - Constructor for class ome.model.annotations.ExperimenterAnnotationLink

ExperimenterAnnotationLink(Long) - Constructor for class ome.model.annotations.ExperimenterAnnotationLink

ExperimenterAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.ExperimenterAnnotationLink

Main constructor.

ExperimenterAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.ExperimenterAnnotationLink

ExperimenterAnnotationLink.Details - Class in ome.model.annotations

experimenterGroup - Variable in class ome.model.meta.Event

EXPERIMENTERGROUP - Static variable in class ome.model.meta.Event

ExperimenterGroup - Class in ome.model.meta

ExperimenterGroup() - Constructor for class ome.model.meta.ExperimenterGroup

ExperimenterGroup(Long) - Constructor for class ome.model.meta.ExperimenterGroup

ExperimenterGroup(Long, boolean) - Constructor for class ome.model.meta.ExperimenterGroup

Main constructor.

ExperimenterGroup(String, Boolean) - Constructor for class ome.model.meta.ExperimenterGroup

ExperimenterGroup.Details - Class in ome.model.meta

ExperimenterGroupAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

ExperimenterGroupAnnotationLink() - Constructor for class ome.model.annotations.ExperimenterGroupAnnotationLink

ExperimenterGroupAnnotationLink(Long) - Constructor for class ome.model.annotations.ExperimenterGroupAnnotationLink

ExperimenterGroupAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.ExperimenterGroupAnnotationLink

Main constructor.

ExperimenterGroupAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.ExperimenterGroupAnnotationLink

ExperimenterGroupAnnotationLink.Details - Class in ome.model.annotations

ExperimentType - Class in ome.model.enums

ExperimentType() - Constructor for class ome.model.enums.ExperimentType

ExperimentType(Long) - Constructor for class ome.model.enums.ExperimentType

ExperimentType(Long, boolean) - Constructor for class ome.model.enums.ExperimentType

Main constructor.

ExperimentType(String) - Constructor for class ome.model.enums.ExperimentType

ExperimentType.Details - Class in ome.model.enums

ExpiredCredentialException - Exception in ome.conditions

Correct username and credentials provided, but credentials expired.

ExpiredCredentialException(String) - Constructor for exception ome.conditions.ExpiredCredentialException

exposureTime - Variable in class ome.model.core.PlaneInfo

EXPOSURETIME - Static variable in class ome.model.core.PlaneInfo

externalDescription - Variable in class ome.model.screen.Well

EXTERNALDESCRIPTION - Static variable in class ome.model.screen.Well

externalIdentifier - Variable in class ome.model.screen.Plate

EXTERNALIDENTIFIER - Static variable in class ome.model.screen.Plate

externalIdentifier - Variable in class ome.model.screen.Well

EXTERNALIDENTIFIER - Static variable in class ome.model.screen.Well

EXTERNALINFO - Static variable in class ome.model.internal.Details

ExternalInfo - Class in ome.model.meta

These filter definitions are used by the security system to eliminate non-readable objects from queries.

ExternalInfo() - Constructor for class ome.model.meta.ExternalInfo

ExternalInfo(Long) - Constructor for class ome.model.meta.ExternalInfo

ExternalInfo(Long, boolean) - Constructor for class ome.model.meta.ExternalInfo

Main constructor.

ExternalInfo(Long, String) - Constructor for class ome.model.meta.ExternalInfo

ExternalInfo.Details - Class in ome.model.meta

F

family - Variable in class ome.model.display.ChannelBinding

FAMILY - Static variable in class ome.model.display.ChannelBinding

Family - Class in ome.model.enums

Family() - Constructor for class ome.model.enums.Family

Family(Long) - Constructor for class ome.model.enums.Family

Family(Long, boolean) - Constructor for class ome.model.enums.Family

Main constructor.

Family(String) - Constructor for class ome.model.enums.Family

Family.Details - Class in ome.model.enums

FIELDS - Static variable in class ome.model.acquisition.Arc

fields() - Method in class ome.model.acquisition.Arc

FIELDS - Static variable in class ome.model.acquisition.Detector

fields() - Method in class ome.model.acquisition.Detector

FIELDS - Static variable in class ome.model.acquisition.DetectorSettings

fields() - Method in class ome.model.acquisition.DetectorSettings

FIELDS - Static variable in class ome.model.acquisition.Dichroic

fields() - Method in class ome.model.acquisition.Dichroic

FIELDS - Static variable in class ome.model.acquisition.Filament

fields() - Method in class ome.model.acquisition.Filament

FIELDS - Static variable in class ome.model.acquisition.Filter

fields() - Method in class ome.model.acquisition.Filter

FIELDS - Static variable in class ome.model.acquisition.FilterSet

fields() - Method in class ome.model.acquisition.FilterSet

FIELDS - Static variable in class ome.model.acquisition.FilterSetEmissionFilterLink

fields() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink

FIELDS - Static variable in class ome.model.acquisition.FilterSetExcitationFilterLink

fields() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink

FIELDS - Static variable in class ome.model.acquisition.GenericExcitationSource

fields() - Method in class ome.model.acquisition.GenericExcitationSource

FIELDS - Static variable in class ome.model.acquisition.ImagingEnvironment

fields() - Method in class ome.model.acquisition.ImagingEnvironment

FIELDS - Static variable in class ome.model.acquisition.Instrument

fields() - Method in class ome.model.acquisition.Instrument

FIELDS - Static variable in class ome.model.acquisition.Laser

fields() - Method in class ome.model.acquisition.Laser

FIELDS - Static variable in class ome.model.acquisition.LightEmittingDiode

fields() - Method in class ome.model.acquisition.LightEmittingDiode

FIELDS - Static variable in class ome.model.acquisition.LightPath

fields() - Method in class ome.model.acquisition.LightPath

FIELDS - Static variable in class ome.model.acquisition.LightPathEmissionFilterLink

fields() - Method in class ome.model.acquisition.LightPathEmissionFilterLink

FIELDS - Static variable in class ome.model.acquisition.LightPathExcitationFilterLink

fields() - Method in class ome.model.acquisition.LightPathExcitationFilterLink

FIELDS - Static variable in class ome.model.acquisition.LightSettings

fields() - Method in class ome.model.acquisition.LightSettings

FIELDS - Static variable in class ome.model.acquisition.LightSource

fields() - Method in class ome.model.acquisition.LightSource

FIELDS - Static variable in class ome.model.acquisition.Microscope

fields() - Method in class ome.model.acquisition.Microscope

FIELDS - Static variable in class ome.model.acquisition.Objective

fields() - Method in class ome.model.acquisition.Objective

FIELDS - Static variable in class ome.model.acquisition.ObjectiveSettings

fields() - Method in class ome.model.acquisition.ObjectiveSettings

FIELDS - Static variable in class ome.model.acquisition.OTF

fields() - Method in class ome.model.acquisition.OTF

FIELDS - Static variable in class ome.model.acquisition.StageLabel

fields() - Method in class ome.model.acquisition.StageLabel

FIELDS - Static variable in class ome.model.acquisition.TransmittanceRange

fields() - Method in class ome.model.acquisition.TransmittanceRange

FIELDS - Static variable in class ome.model.annotations.Annotation

fields() - Method in class ome.model.annotations.Annotation

FIELDS - Static variable in class ome.model.annotations.AnnotationAnnotationLink

fields() - Method in class ome.model.annotations.AnnotationAnnotationLink

FIELDS - Static variable in class ome.model.annotations.BasicAnnotation

fields() - Method in class ome.model.annotations.BasicAnnotation

FIELDS - Static variable in class ome.model.annotations.BooleanAnnotation

fields() - Method in class ome.model.annotations.BooleanAnnotation

FIELDS - Static variable in class ome.model.annotations.ChannelAnnotationLink

fields() - Method in class ome.model.annotations.ChannelAnnotationLink

FIELDS - Static variable in class ome.model.annotations.CommentAnnotation

fields() - Method in class ome.model.annotations.CommentAnnotation

FIELDS - Static variable in class ome.model.annotations.DatasetAnnotationLink

fields() - Method in class ome.model.annotations.DatasetAnnotationLink

FIELDS - Static variable in class ome.model.annotations.DetectorAnnotationLink

fields() - Method in class ome.model.annotations.DetectorAnnotationLink

FIELDS - Static variable in class ome.model.annotations.DichroicAnnotationLink

fields() - Method in class ome.model.annotations.DichroicAnnotationLink

FIELDS - Static variable in class ome.model.annotations.DoubleAnnotation

fields() - Method in class ome.model.annotations.DoubleAnnotation

FIELDS - Static variable in class ome.model.annotations.ExperimenterAnnotationLink

fields() - Method in class ome.model.annotations.ExperimenterAnnotationLink

FIELDS - Static variable in class ome.model.annotations.ExperimenterGroupAnnotationLink

fields() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink

FIELDS - Static variable in class ome.model.annotations.FileAnnotation

fields() - Method in class ome.model.annotations.FileAnnotation

FIELDS - Static variable in class ome.model.annotations.FilesetAnnotationLink

fields() - Method in class ome.model.annotations.FilesetAnnotationLink

FIELDS - Static variable in class ome.model.annotations.FilterAnnotationLink

fields() - Method in class ome.model.annotations.FilterAnnotationLink

FIELDS - Static variable in class ome.model.annotations.FolderAnnotationLink

fields() - Method in class ome.model.annotations.FolderAnnotationLink

FIELDS - Static variable in class ome.model.annotations.ImageAnnotationLink

fields() - Method in class ome.model.annotations.ImageAnnotationLink

FIELDS - Static variable in class ome.model.annotations.InstrumentAnnotationLink

fields() - Method in class ome.model.annotations.InstrumentAnnotationLink

FIELDS - Static variable in class ome.model.annotations.LightPathAnnotationLink

fields() - Method in class ome.model.annotations.LightPathAnnotationLink

FIELDS - Static variable in class ome.model.annotations.LightSourceAnnotationLink

fields() - Method in class ome.model.annotations.LightSourceAnnotationLink

FIELDS - Static variable in class ome.model.annotations.ListAnnotation

fields() - Method in class ome.model.annotations.ListAnnotation

FIELDS - Static variable in class ome.model.annotations.LongAnnotation

fields() - Method in class ome.model.annotations.LongAnnotation

FIELDS - Static variable in class ome.model.annotations.MapAnnotation

fields() - Method in class ome.model.annotations.MapAnnotation

FIELDS - Static variable in class ome.model.annotations.NamespaceAnnotationLink

fields() - Method in class ome.model.annotations.NamespaceAnnotationLink

FIELDS - Static variable in class ome.model.annotations.NodeAnnotationLink

fields() - Method in class ome.model.annotations.NodeAnnotationLink

FIELDS - Static variable in class ome.model.annotations.NumericAnnotation

fields() - Method in class ome.model.annotations.NumericAnnotation

FIELDS - Static variable in class ome.model.annotations.ObjectiveAnnotationLink

fields() - Method in class ome.model.annotations.ObjectiveAnnotationLink

FIELDS - Static variable in class ome.model.annotations.OriginalFileAnnotationLink

fields() - Method in class ome.model.annotations.OriginalFileAnnotationLink

FIELDS - Static variable in class ome.model.annotations.PlaneInfoAnnotationLink

fields() - Method in class ome.model.annotations.PlaneInfoAnnotationLink

FIELDS - Static variable in class ome.model.annotations.PlateAcquisitionAnnotationLink

fields() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink

FIELDS - Static variable in class ome.model.annotations.PlateAnnotationLink

fields() - Method in class ome.model.annotations.PlateAnnotationLink

FIELDS - Static variable in class ome.model.annotations.ProjectAnnotationLink

fields() - Method in class ome.model.annotations.ProjectAnnotationLink

FIELDS - Static variable in class ome.model.annotations.ReagentAnnotationLink

fields() - Method in class ome.model.annotations.ReagentAnnotationLink

FIELDS - Static variable in class ome.model.annotations.RoiAnnotationLink

fields() - Method in class ome.model.annotations.RoiAnnotationLink

FIELDS - Static variable in class ome.model.annotations.ScreenAnnotationLink

fields() - Method in class ome.model.annotations.ScreenAnnotationLink

FIELDS - Static variable in class ome.model.annotations.SessionAnnotationLink

fields() - Method in class ome.model.annotations.SessionAnnotationLink

FIELDS - Static variable in class ome.model.annotations.ShapeAnnotationLink

fields() - Method in class ome.model.annotations.ShapeAnnotationLink

FIELDS - Static variable in class ome.model.annotations.TagAnnotation

fields() - Method in class ome.model.annotations.TagAnnotation

FIELDS - Static variable in class ome.model.annotations.TermAnnotation

fields() - Method in class ome.model.annotations.TermAnnotation

FIELDS - Static variable in class ome.model.annotations.TextAnnotation

fields() - Method in class ome.model.annotations.TextAnnotation

FIELDS - Static variable in class ome.model.annotations.TimestampAnnotation

fields() - Method in class ome.model.annotations.TimestampAnnotation

FIELDS - Static variable in class ome.model.annotations.TypeAnnotation

fields() - Method in class ome.model.annotations.TypeAnnotation

FIELDS - Static variable in class ome.model.annotations.WellAnnotationLink

fields() - Method in class ome.model.annotations.WellAnnotationLink

FIELDS - Static variable in class ome.model.annotations.XmlAnnotation

fields() - Method in class ome.model.annotations.XmlAnnotation

FIELDS - Static variable in class ome.model.containers.Dataset

fields() - Method in class ome.model.containers.Dataset

FIELDS - Static variable in class ome.model.containers.DatasetImageLink

fields() - Method in class ome.model.containers.DatasetImageLink

FIELDS - Static variable in class ome.model.containers.Folder

fields() - Method in class ome.model.containers.Folder

FIELDS - Static variable in class ome.model.containers.FolderImageLink

fields() - Method in class ome.model.containers.FolderImageLink

FIELDS - Static variable in class ome.model.containers.FolderRoiLink

fields() - Method in class ome.model.containers.FolderRoiLink

FIELDS - Static variable in class ome.model.containers.Project

fields() - Method in class ome.model.containers.Project

FIELDS - Static variable in class ome.model.containers.ProjectDatasetLink

fields() - Method in class ome.model.containers.ProjectDatasetLink

FIELDS - Static variable in class ome.model.core.Channel

fields() - Method in class ome.model.core.Channel

FIELDS - Static variable in class ome.model.core.Image

fields() - Method in class ome.model.core.Image

FIELDS - Static variable in class ome.model.core.LogicalChannel

fields() - Method in class ome.model.core.LogicalChannel

FIELDS - Static variable in class ome.model.core.OriginalFile

fields() - Method in class ome.model.core.OriginalFile

FIELDS - Static variable in class ome.model.core.Pixels

fields() - Method in class ome.model.core.Pixels

FIELDS - Static variable in class ome.model.core.PixelsOriginalFileMap

fields() - Method in class ome.model.core.PixelsOriginalFileMap

FIELDS - Static variable in class ome.model.core.PlaneInfo

fields() - Method in class ome.model.core.PlaneInfo

FIELDS - Static variable in class ome.model.display.ChannelBinding

fields() - Method in class ome.model.display.ChannelBinding

FIELDS - Static variable in class ome.model.display.CodomainMapContext

fields() - Method in class ome.model.display.CodomainMapContext

FIELDS - Static variable in class ome.model.display.ContrastStretchingContext

fields() - Method in class ome.model.display.ContrastStretchingContext

FIELDS - Static variable in class ome.model.display.PlaneSlicingContext

fields() - Method in class ome.model.display.PlaneSlicingContext

FIELDS - Static variable in class ome.model.display.ProjectionDef

fields() - Method in class ome.model.display.ProjectionDef

FIELDS - Static variable in class ome.model.display.QuantumDef

fields() - Method in class ome.model.display.QuantumDef

FIELDS - Static variable in class ome.model.display.RenderingDef

fields() - Method in class ome.model.display.RenderingDef

FIELDS - Static variable in class ome.model.display.ReverseIntensityContext

fields() - Method in class ome.model.display.ReverseIntensityContext

FIELDS - Static variable in class ome.model.display.Thumbnail

fields() - Method in class ome.model.display.Thumbnail

FIELDS - Static variable in class ome.model.enums.AcquisitionMode

fields() - Method in class ome.model.enums.AcquisitionMode

FIELDS - Static variable in class ome.model.enums.AdminPrivilege

fields() - Method in class ome.model.enums.AdminPrivilege

FIELDS - Static variable in class ome.model.enums.ArcType

fields() - Method in class ome.model.enums.ArcType

FIELDS - Static variable in class ome.model.enums.Binning

fields() - Method in class ome.model.enums.Binning

FIELDS - Static variable in class ome.model.enums.ChecksumAlgorithm

fields() - Method in class ome.model.enums.ChecksumAlgorithm

FIELDS - Static variable in class ome.model.enums.ContrastMethod

fields() - Method in class ome.model.enums.ContrastMethod

FIELDS - Static variable in class ome.model.enums.Correction

fields() - Method in class ome.model.enums.Correction

FIELDS - Static variable in class ome.model.enums.DetectorType

fields() - Method in class ome.model.enums.DetectorType

FIELDS - Static variable in class ome.model.enums.DimensionOrder

fields() - Method in class ome.model.enums.DimensionOrder

FIELDS - Static variable in class ome.model.enums.EventType

fields() - Method in class ome.model.enums.EventType

FIELDS - Static variable in class ome.model.enums.ExperimentType

fields() - Method in class ome.model.enums.ExperimentType

FIELDS - Static variable in class ome.model.enums.Family

fields() - Method in class ome.model.enums.Family

FIELDS - Static variable in class ome.model.enums.FilamentType

fields() - Method in class ome.model.enums.FilamentType

FIELDS - Static variable in class ome.model.enums.FilterType

fields() - Method in class ome.model.enums.FilterType

FIELDS - Static variable in class ome.model.enums.Format

fields() - Method in class ome.model.enums.Format

FIELDS - Static variable in class ome.model.enums.Illumination

fields() - Method in class ome.model.enums.Illumination

FIELDS - Static variable in class ome.model.enums.Immersion

fields() - Method in class ome.model.enums.Immersion

FIELDS - Static variable in class ome.model.enums.LaserMedium

fields() - Method in class ome.model.enums.LaserMedium

FIELDS - Static variable in class ome.model.enums.LaserType

fields() - Method in class ome.model.enums.LaserType

FIELDS - Static variable in class ome.model.enums.Medium

fields() - Method in class ome.model.enums.Medium

FIELDS - Static variable in class ome.model.enums.MicrobeamManipulationType

fields() - Method in class ome.model.enums.MicrobeamManipulationType

FIELDS - Static variable in class ome.model.enums.MicroscopeType

fields() - Method in class ome.model.enums.MicroscopeType

FIELDS - Static variable in class ome.model.enums.PhotometricInterpretation

fields() - Method in class ome.model.enums.PhotometricInterpretation

FIELDS - Static variable in class ome.model.enums.PixelsType

fields() - Method in class ome.model.enums.PixelsType

FIELDS - Static variable in class ome.model.enums.ProjectionAxis

fields() - Method in class ome.model.enums.ProjectionAxis

FIELDS - Static variable in class ome.model.enums.ProjectionType

fields() - Method in class ome.model.enums.ProjectionType

FIELDS - Static variable in class ome.model.enums.Pulse

fields() - Method in class ome.model.enums.Pulse

FIELDS - Static variable in class ome.model.enums.RenderingModel

fields() - Method in class ome.model.enums.RenderingModel

FIELDS - Static variable in class ome.model.experiment.Experiment

fields() - Method in class ome.model.experiment.Experiment

FIELDS - Static variable in class ome.model.experiment.MicrobeamManipulation

fields() - Method in class ome.model.experiment.MicrobeamManipulation

FIELDS - Static variable in class ome.model.fs.Fileset

fields() - Method in class ome.model.fs.Fileset

FIELDS - Static variable in class ome.model.fs.FilesetEntry

fields() - Method in class ome.model.fs.FilesetEntry

FIELDS - Static variable in class ome.model.fs.FilesetJobLink

fields() - Method in class ome.model.fs.FilesetJobLink

FIELDS - Static variable in class ome.model.internal.Link

fields() - Method in class ome.model.internal.Link

fields() - Method in interface ome.model.IObject

returns a Set of field names that belong to this class

FIELDS - Static variable in class ome.model.jobs.ImportJob

Deprecated.

fields() - Method in class ome.model.jobs.ImportJob

Deprecated.

FIELDS - Static variable in class ome.model.jobs.IndexingJob

fields() - Method in class ome.model.jobs.IndexingJob

FIELDS - Static variable in class ome.model.jobs.IntegrityCheckJob

fields() - Method in class ome.model.jobs.IntegrityCheckJob

FIELDS - Static variable in class ome.model.jobs.Job

fields() - Method in class ome.model.jobs.Job

FIELDS - Static variable in class ome.model.jobs.JobOriginalFileLink

fields() - Method in class ome.model.jobs.JobOriginalFileLink

FIELDS - Static variable in class ome.model.jobs.JobStatus

fields() - Method in class ome.model.jobs.JobStatus

FIELDS - Static variable in class ome.model.jobs.MetadataImportJob

fields() - Method in class ome.model.jobs.MetadataImportJob

FIELDS - Static variable in class ome.model.jobs.ParseJob

fields() - Method in class ome.model.jobs.ParseJob

FIELDS - Static variable in class ome.model.jobs.PixelDataJob

fields() - Method in class ome.model.jobs.PixelDataJob

FIELDS - Static variable in class ome.model.jobs.ScriptJob

fields() - Method in class ome.model.jobs.ScriptJob

FIELDS - Static variable in class ome.model.jobs.ThumbnailGenerationJob

fields() - Method in class ome.model.jobs.ThumbnailGenerationJob

FIELDS - Static variable in class ome.model.jobs.UploadJob

fields() - Method in class ome.model.jobs.UploadJob

FIELDS - Static variable in class ome.model.meta.DBPatch

fields() - Method in class ome.model.meta.DBPatch

FIELDS - Static variable in class ome.model.meta.Event

fields() - Method in class ome.model.meta.Event

FIELDS - Static variable in class ome.model.meta.EventLog

fields() - Method in class ome.model.meta.EventLog

FIELDS - Static variable in class ome.model.meta.Experimenter

fields() - Method in class ome.model.meta.Experimenter

FIELDS - Static variable in class ome.model.meta.ExperimenterGroup

fields() - Method in class ome.model.meta.ExperimenterGroup

FIELDS - Static variable in class ome.model.meta.ExternalInfo

fields() - Method in class ome.model.meta.ExternalInfo

FIELDS - Static variable in class ome.model.meta.GroupExperimenterMap

fields() - Method in class ome.model.meta.GroupExperimenterMap

FIELDS - Static variable in class ome.model.meta.Namespace

fields() - Method in class ome.model.meta.Namespace

FIELDS - Static variable in class ome.model.meta.Node

fields() - Method in class ome.model.meta.Node

FIELDS - Static variable in class ome.model.meta.Session

fields() - Method in class ome.model.meta.Session

FIELDS - Static variable in class ome.model.meta.Share

fields() - Method in class ome.model.meta.Share

FIELDS - Static variable in class ome.model.meta.ShareMember

fields() - Method in class ome.model.meta.ShareMember

FIELDS - Static variable in class ome.model.roi.AffineTransform

fields() - Method in class ome.model.roi.AffineTransform

FIELDS - Static variable in class ome.model.roi.Ellipse

fields() - Method in class ome.model.roi.Ellipse

FIELDS - Static variable in class ome.model.roi.Label

fields() - Method in class ome.model.roi.Label

FIELDS - Static variable in class ome.model.roi.Line

fields() - Method in class ome.model.roi.Line

FIELDS - Static variable in class ome.model.roi.Mask

fields() - Method in class ome.model.roi.Mask

FIELDS - Static variable in class ome.model.roi.Path

Deprecated.

fields() - Method in class ome.model.roi.Path

Deprecated.

FIELDS - Static variable in class ome.model.roi.Point

fields() - Method in class ome.model.roi.Point

FIELDS - Static variable in class ome.model.roi.Polygon

fields() - Method in class ome.model.roi.Polygon

FIELDS - Static variable in class ome.model.roi.Polyline

fields() - Method in class ome.model.roi.Polyline

FIELDS - Static variable in class ome.model.roi.Rectangle

fields() - Method in class ome.model.roi.Rectangle

FIELDS - Static variable in class ome.model.roi.Roi

fields() - Method in class ome.model.roi.Roi

FIELDS - Static variable in class ome.model.roi.Shape

fields() - Method in class ome.model.roi.Shape

FIELDS - Static variable in class ome.model.screen.Plate

fields() - Method in class ome.model.screen.Plate

FIELDS - Static variable in class ome.model.screen.PlateAcquisition

fields() - Method in class ome.model.screen.PlateAcquisition

FIELDS - Static variable in class ome.model.screen.Reagent

fields() - Method in class ome.model.screen.Reagent

FIELDS - Static variable in class ome.model.screen.Screen

fields() - Method in class ome.model.screen.Screen

FIELDS - Static variable in class ome.model.screen.ScreenPlateLink

fields() - Method in class ome.model.screen.ScreenPlateLink

FIELDS - Static variable in class ome.model.screen.Well

fields() - Method in class ome.model.screen.Well

FIELDS - Static variable in class ome.model.screen.WellReagentLink

fields() - Method in class ome.model.screen.WellReagentLink

FIELDS - Static variable in class ome.model.screen.WellSample

fields() - Method in class ome.model.screen.WellSample

FIELDS - Static variable in class ome.model.stats.StatsInfo

fields() - Method in class ome.model.stats.StatsInfo

fields() - Method in class ome.util.PermDetails

Filament - Class in ome.model.acquisition

Filament() - Constructor for class ome.model.acquisition.Filament

Filament(Long) - Constructor for class ome.model.acquisition.Filament

Filament(Long, boolean) - Constructor for class ome.model.acquisition.Filament

Main constructor.

Filament(FilamentType) - Constructor for class ome.model.acquisition.Filament

FilamentType - Class in ome.model.enums

FilamentType() - Constructor for class ome.model.enums.FilamentType

FilamentType(Long) - Constructor for class ome.model.enums.FilamentType

FilamentType(Long, boolean) - Constructor for class ome.model.enums.FilamentType

Main constructor.

FilamentType(String) - Constructor for class ome.model.enums.FilamentType

FilamentType.Details - Class in ome.model.enums

file - Variable in class ome.model.annotations.FileAnnotation

FILE - Static variable in class ome.model.annotations.FileAnnotation

FileAnnotation - Class in ome.model.annotations

FileAnnotation() - Constructor for class ome.model.annotations.FileAnnotation

FileAnnotation(Long) - Constructor for class ome.model.annotations.FileAnnotation

FileAnnotation(Long, boolean) - Constructor for class ome.model.annotations.FileAnnotation

Main constructor.

fileId - Variable in class ome.util.SqlAction.DeleteLog

fileIdsInDb(String, Set<String>) - Method in interface ome.util.SqlAction

Return all IDs matching the given mimetypes, or all IDs if mimetypes is null.

fileIdsInDb(String, Set<String>) - Method in class ome.util.SqlAction.Impl

fileRepo(long) - Method in interface ome.util.SqlAction

fileRepo(long) - Method in class ome.util.SqlAction.Impl

fileset - Variable in class ome.model.core.Image

FILESET - Static variable in class ome.model.core.Image

Fileset - Class in ome.model.fs

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Fileset() - Constructor for class ome.model.fs.Fileset

Fileset(Long) - Constructor for class ome.model.fs.Fileset

Fileset(Long, boolean) - Constructor for class ome.model.fs.Fileset

Main constructor.

Fileset(String) - Constructor for class ome.model.fs.Fileset

fileset - Variable in class ome.model.fs.FilesetEntry

FILESET - Static variable in class ome.model.fs.FilesetEntry

Fileset.Details - Class in ome.model.fs

FilesetAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FilesetAnnotationLink() - Constructor for class ome.model.annotations.FilesetAnnotationLink

FilesetAnnotationLink(Long) - Constructor for class ome.model.annotations.FilesetAnnotationLink

FilesetAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.FilesetAnnotationLink

Main constructor.

FilesetAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.FilesetAnnotationLink

FilesetAnnotationLink.Details - Class in ome.model.annotations

filesetEntries - Variable in class ome.model.core.OriginalFile

FILESETENTRIES - Static variable in class ome.model.core.OriginalFile

FilesetEntry - Class in ome.model.fs

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FilesetEntry() - Constructor for class ome.model.fs.FilesetEntry

FilesetEntry(Long) - Constructor for class ome.model.fs.FilesetEntry

FilesetEntry(Long, boolean) - Constructor for class ome.model.fs.FilesetEntry

Main constructor.

FilesetEntry(Fileset, OriginalFile, String) - Constructor for class ome.model.fs.FilesetEntry

FilesetEntry.Details - Class in ome.model.fs

FilesetJobLink - Class in ome.model.fs

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FilesetJobLink() - Constructor for class ome.model.fs.FilesetJobLink

FilesetJobLink(Long) - Constructor for class ome.model.fs.FilesetJobLink

FilesetJobLink(Long, boolean) - Constructor for class ome.model.fs.FilesetJobLink

Main constructor.

FilesetJobLink(IObject, IObject) - Constructor for class ome.model.fs.FilesetJobLink

FilesetJobLink.Details - Class in ome.model.fs

fillColor - Variable in class ome.model.roi.Shape

FILLCOLOR - Static variable in class ome.model.roi.Shape

fillObject(ReverseModelMapper) - Method in interface ome.model.ModelBased

fillRule - Variable in class ome.model.roi.Shape

FILLRULE - Static variable in class ome.model.roi.Shape

Filter - Class in ome.model.acquisition

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Filter() - Constructor for class ome.model.acquisition.Filter

Filter(Long) - Constructor for class ome.model.acquisition.Filter

Filter(Long, boolean) - Constructor for class ome.model.acquisition.Filter

Main constructor.

Filter(Instrument) - Constructor for class ome.model.acquisition.Filter

filter - Variable in class ome.model.acquisition.Instrument

FILTER - Static variable in class ome.model.acquisition.Instrument

Filter - Class in ome.parameters

parameter to generally reduce the size of a query result set.

Filter() - Constructor for class ome.parameters.Filter

filter(String, Filterable) - Method in class ome.util.ContextFilter

filter(String, Collection) - Method in class ome.util.ContextFilter

iterates over the contents of the collection and filters each.

filter(String, Map) - Method in class ome.util.ContextFilter

filters both the key and value sets of the map.

filter(String, Object) - Method in class ome.util.ContextFilter

used when type is unknown.

filter(String, ContextFilter.Entry) - Method in class ome.util.ContextFilter

doesn't return a new entry.

Filter - Interface in ome.util

marks objects which can be filtered using {see FIXME }.

filter(String, Filterable) - Method in interface ome.util.Filter

filter(String, Collection) - Method in interface ome.util.Filter

filter(String, Map) - Method in interface ome.util.Filter

filter(String, Object) - Method in interface ome.util.Filter

filter(String, Filterable) - Method in class ome.util.ModelMapper

filter(String, Collection) - Method in class ome.util.ModelMapper

filter(String, Map) - Method in class ome.util.ModelMapper

filter(String, Object) - Method in class ome.util.RdfPrinter

filter(String, Filterable) - Method in class ome.util.RdfPrinter

filter(String, Collection) - Method in class ome.util.RdfPrinter

Filter.Details - Class in ome.model.acquisition

Filterable - Interface in ome.util

marks objects which can be filtered using {see FIXME }.

FilterAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FilterAnnotationLink() - Constructor for class ome.model.annotations.FilterAnnotationLink

FilterAnnotationLink(Long) - Constructor for class ome.model.annotations.FilterAnnotationLink

FilterAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.FilterAnnotationLink

Main constructor.

FilterAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.FilterAnnotationLink

FilterAnnotationLink.Details - Class in ome.model.annotations

filteredSet() - Method in class ome.model.internal.Details

copy of the current collection of filtered names.

filteredSize() - Method in class ome.model.internal.Details

the count of collections which were filtered.

filterFileIdsByRepo(String, List<Long>) - Method in interface ome.util.SqlAction

Find the original file IDs among those given that are in the given repository.

filterFileIdsByRepo(String, List<Long>) - Method in class ome.util.SqlAction.Impl

FilterSet - Class in ome.model.acquisition

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FilterSet() - Constructor for class ome.model.acquisition.FilterSet

FilterSet(Long) - Constructor for class ome.model.acquisition.FilterSet

FilterSet(Long, boolean) - Constructor for class ome.model.acquisition.FilterSet

Main constructor.

FilterSet(Instrument) - Constructor for class ome.model.acquisition.FilterSet

filterSet - Variable in class ome.model.acquisition.Instrument

FILTERSET - Static variable in class ome.model.acquisition.Instrument

filterSet - Variable in class ome.model.acquisition.OTF

FILTERSET - Static variable in class ome.model.acquisition.OTF

filterSet - Variable in class ome.model.core.LogicalChannel

FILTERSET - Static variable in class ome.model.core.LogicalChannel

FilterSet.Details - Class in ome.model.acquisition

FilterSetEmissionFilterLink - Class in ome.model.acquisition

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FilterSetEmissionFilterLink() - Constructor for class ome.model.acquisition.FilterSetEmissionFilterLink

FilterSetEmissionFilterLink(Long) - Constructor for class ome.model.acquisition.FilterSetEmissionFilterLink

FilterSetEmissionFilterLink(Long, boolean) - Constructor for class ome.model.acquisition.FilterSetEmissionFilterLink

Main constructor.

FilterSetEmissionFilterLink(IObject, IObject) - Constructor for class ome.model.acquisition.FilterSetEmissionFilterLink

FilterSetEmissionFilterLink.Details - Class in ome.model.acquisition

FilterSetExcitationFilterLink - Class in ome.model.acquisition

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FilterSetExcitationFilterLink() - Constructor for class ome.model.acquisition.FilterSetExcitationFilterLink

FilterSetExcitationFilterLink(Long) - Constructor for class ome.model.acquisition.FilterSetExcitationFilterLink

FilterSetExcitationFilterLink(Long, boolean) - Constructor for class ome.model.acquisition.FilterSetExcitationFilterLink

Main constructor.

FilterSetExcitationFilterLink(IObject, IObject) - Constructor for class ome.model.acquisition.FilterSetExcitationFilterLink

FilterSetExcitationFilterLink.Details - Class in ome.model.acquisition

FilterType - Class in ome.model.enums

FilterType() - Constructor for class ome.model.enums.FilterType

FilterType(Long) - Constructor for class ome.model.enums.FilterType

FilterType(Long, boolean) - Constructor for class ome.model.enums.FilterType

Main constructor.

FilterType(String) - Constructor for class ome.model.enums.FilterType

FilterType.Details - Class in ome.model.enums

filterWheel - Variable in class ome.model.acquisition.Filter

FILTERWHEEL - Static variable in class ome.model.acquisition.Filter

findAnnotationAnnotationLink(Annotation) - Method in class ome.model.annotations.Annotation

find all ome.model.annotations.AnnotationAnnotationLink which have the argument as their child.

findChannelAnnotationLink(Annotation) - Method in class ome.model.core.Channel

find all ome.model.annotations.ChannelAnnotationLink which have the argument as their child.

findClass(Class) - Method in class ome.util.ModelMapper

findCollection(Collection) - Method in class ome.util.ModelMapper

findCollectionTarget(Object) - Method in class ome.util.ModelMapper

extension point which subclasses can override to better map the values of collections and maps.

findDatasetAnnotationLink(Annotation) - Method in class ome.model.containers.Dataset

find all ome.model.annotations.DatasetAnnotationLink which have the argument as their child.

findDatasetImageLink(Image) - Method in class ome.model.containers.Dataset

find all ome.model.containers.DatasetImageLink which have the argument as their child.

findDatasetImageLink(Dataset) - Method in class ome.model.core.Image

find all ome.model.containers.DatasetImageLink which have the argument as their parent.

findDetectorAnnotationLink(Annotation) - Method in class ome.model.acquisition.Detector

find all ome.model.annotations.DetectorAnnotationLink which have the argument as their child.

findDichroicAnnotationLink(Annotation) - Method in class ome.model.acquisition.Dichroic

find all ome.model.annotations.DichroicAnnotationLink which have the argument as their child.

findExperimenterAnnotationLink(Annotation) - Method in class ome.model.meta.Experimenter

find all ome.model.annotations.ExperimenterAnnotationLink which have the argument as their child.

findExperimenterGroupAnnotationLink(Annotation) - Method in class ome.model.meta.ExperimenterGroup

find all ome.model.annotations.ExperimenterGroupAnnotationLink which have the argument as their child.

findFilesetAnnotationLink(Annotation) - Method in class ome.model.fs.Fileset

find all ome.model.annotations.FilesetAnnotationLink which have the argument as their child.

findFilesetJobLink(Job) - Method in class ome.model.fs.Fileset

find all ome.model.fs.FilesetJobLink which have the argument as their child.

findFilterAnnotationLink(Annotation) - Method in class ome.model.acquisition.Filter

find all ome.model.annotations.FilterAnnotationLink which have the argument as their child.

findFilterSetEmissionFilterLink(FilterSet) - Method in class ome.model.acquisition.Filter

find all ome.model.acquisition.FilterSetEmissionFilterLink which have the argument as their parent.

findFilterSetEmissionFilterLink(Filter) - Method in class ome.model.acquisition.FilterSet

find all ome.model.acquisition.FilterSetEmissionFilterLink which have the argument as their child.

findFilterSetExcitationFilterLink(FilterSet) - Method in class ome.model.acquisition.Filter

find all ome.model.acquisition.FilterSetExcitationFilterLink which have the argument as their parent.

findFilterSetExcitationFilterLink(Filter) - Method in class ome.model.acquisition.FilterSet

find all ome.model.acquisition.FilterSetExcitationFilterLink which have the argument as their child.

findFolderAnnotationLink(Annotation) - Method in class ome.model.containers.Folder

find all ome.model.annotations.FolderAnnotationLink which have the argument as their child.

findFolderImageLink(Image) - Method in class ome.model.containers.Folder

find all ome.model.containers.FolderImageLink which have the argument as their child.

findFolderImageLink(Folder) - Method in class ome.model.core.Image

find all ome.model.containers.FolderImageLink which have the argument as their parent.

findFolderRoiLink(Roi) - Method in class ome.model.containers.Folder

find all ome.model.containers.FolderRoiLink which have the argument as their child.

findFolderRoiLink(Folder) - Method in class ome.model.roi.Roi

find all ome.model.containers.FolderRoiLink which have the argument as their parent.

findGroupExperimenterMap(ExperimenterGroup) - Method in class ome.model.meta.Experimenter

find all ome.model.meta.GroupExperimenterMap which have the argument as their parent.

findGroupExperimenterMap(Experimenter) - Method in class ome.model.meta.ExperimenterGroup

find all ome.model.meta.GroupExperimenterMap which have the argument as their child.

findImageAnnotationLink(Annotation) - Method in class ome.model.core.Image

find all ome.model.annotations.ImageAnnotationLink which have the argument as their child.

findInstrumentAnnotationLink(Annotation) - Method in class ome.model.acquisition.Instrument

find all ome.model.annotations.InstrumentAnnotationLink which have the argument as their child.

findJobOriginalFileLink(OriginalFile) - Method in class ome.model.jobs.Job

find all ome.model.jobs.JobOriginalFileLink which have the argument as their child.

findKeyTarget(Object) - Method in class ome.util.ModelMapper

extension point which subclasses can override to better map the keys of maps.

findLightPathAnnotationLink(Annotation) - Method in class ome.model.acquisition.LightPath

find all ome.model.annotations.LightPathAnnotationLink which have the argument as their child.

findLightPathEmissionFilterLink(Filter) - Method in class ome.model.acquisition.LightPath

find all ome.model.acquisition.LightPathEmissionFilterLink which have the argument as their child.

findLightPathExcitationFilterLink(Filter) - Method in class ome.model.acquisition.LightPath

find all ome.model.acquisition.LightPathExcitationFilterLink which have the argument as their child.

findLightSourceAnnotationLink(Annotation) - Method in class ome.model.acquisition.LightSource

find all ome.model.annotations.LightSourceAnnotationLink which have the argument as their child.

findMap(Map) - Method in class ome.util.ModelMapper

findNamespaceAnnotationLink(Annotation) - Method in class ome.model.meta.Namespace

find all ome.model.annotations.NamespaceAnnotationLink which have the argument as their child.

findNodeAnnotationLink(Annotation) - Method in class ome.model.meta.Node

find all ome.model.annotations.NodeAnnotationLink which have the argument as their child.

findObjectiveAnnotationLink(Annotation) - Method in class ome.model.acquisition.Objective

find all ome.model.annotations.ObjectiveAnnotationLink which have the argument as their child.

findOldAdminPrivileges() - Method in interface ome.util.SqlAction

Find the completed transactions among the current light administrator privileges.

findOldAdminPrivileges() - Method in class ome.util.SqlAction.Impl

findOriginalFileAnnotationLink(Annotation) - Method in class ome.model.core.OriginalFile

find all ome.model.annotations.OriginalFileAnnotationLink which have the argument as their child.

findPixelsOriginalFileMap(Pixels) - Method in class ome.model.core.OriginalFile

find all ome.model.core.PixelsOriginalFileMap which have the argument as their child.

findPixelsOriginalFileMap(OriginalFile) - Method in class ome.model.core.Pixels

find all ome.model.core.PixelsOriginalFileMap which have the argument as their parent.

findPlaneInfoAnnotationLink(Annotation) - Method in class ome.model.core.PlaneInfo

find all ome.model.annotations.PlaneInfoAnnotationLink which have the argument as their child.

findPlateAcquisitionAnnotationLink(Annotation) - Method in class ome.model.screen.PlateAcquisition

find all ome.model.annotations.PlateAcquisitionAnnotationLink which have the argument as their child.

findPlateAnnotationLink(Annotation) - Method in class ome.model.screen.Plate

find all ome.model.annotations.PlateAnnotationLink which have the argument as their child.

findProjectAnnotationLink(Annotation) - Method in class ome.model.containers.Project

find all ome.model.annotations.ProjectAnnotationLink which have the argument as their child.

findProjectDatasetLink(Project) - Method in class ome.model.containers.Dataset

find all ome.model.containers.ProjectDatasetLink which have the argument as their parent.

findProjectDatasetLink(Dataset) - Method in class ome.model.containers.Project

find all ome.model.containers.ProjectDatasetLink which have the argument as their child.

findReagentAnnotationLink(Annotation) - Method in class ome.model.screen.Reagent

find all ome.model.annotations.ReagentAnnotationLink which have the argument as their child.

findRepoDeleteLogs(SqlAction.DeleteLog) - Method in interface ome.util.SqlAction

Find all SqlAction.DeleteLog entries which match all of the non-null fields provided in the template.

findRepoDeleteLogs(SqlAction.DeleteLog) - Method in class ome.util.SqlAction.Impl

findRepoFile(String, String, String) - Method in interface ome.util.SqlAction

Calls SqlAction.findRepoFile(String, String, String, Set) passing null.

findRepoFile(String, String, String, String) - Method in interface ome.util.SqlAction

Calls SqlAction.findRepoFile(String, String, String, Set)

findRepoFile(String, String, String, Set<String>) - Method in interface ome.util.SqlAction

Lookup the id of an OriginalFile in a given repository or return null if none is found.

findRepoFile(String, String, String) - Method in class ome.util.SqlAction.Impl

findRepoFile(String, String, String, String) - Method in class ome.util.SqlAction.Impl

findRepoFile(String, String, String, Set<String>) - Method in class ome.util.SqlAction.Impl

findRepoFilePath(String, long) - Method in interface ome.util.SqlAction

findRepoFilePath(String, long) - Method in class ome.util.SqlAction.Impl

findRepoFiles(String, String, List<String>, Set<String>) - Method in interface ome.util.SqlAction

Like SqlAction.findRepoFile(String, String, String, Set), but queries in bulk and returns a map for the found IDs.

findRepoFiles(String, String) - Method in interface ome.util.SqlAction

Return a list of original file ids that all have a path value matching the passed dirname in the given repository.

findRepoFiles(String, String, List<String>, Set<String>) - Method in class ome.util.SqlAction.Impl

findRepoFiles(String, String) - Method in class ome.util.SqlAction.Impl

findRepoImageFromPixels(long) - Method in class ome.util.actions.PostgresSqlAction

findRepoImageFromPixels(long) - Method in interface ome.util.SqlAction

findRepoPixels(String, String, String) - Method in class ome.util.actions.PostgresSqlAction

findRepoPixels(String, String, String) - Method in interface ome.util.SqlAction

findRepoRootPath(String) - Method in interface ome.util.SqlAction

Find the path of the repository root.

findRepoRootPath(String) - Method in class ome.util.SqlAction.Impl

findRoiAnnotationLink(Annotation) - Method in class ome.model.roi.Roi

find all ome.model.annotations.RoiAnnotationLink which have the argument as their child.

findScreenAnnotationLink(Annotation) - Method in class ome.model.screen.Screen

find all ome.model.annotations.ScreenAnnotationLink which have the argument as their child.

findScreenPlateLink(Screen) - Method in class ome.model.screen.Plate

find all ome.model.screen.ScreenPlateLink which have the argument as their parent.

findScreenPlateLink(Plate) - Method in class ome.model.screen.Screen

find all ome.model.screen.ScreenPlateLink which have the argument as their child.

findSessionAnnotationLink(Annotation) - Method in class ome.model.meta.Session

find all ome.model.annotations.SessionAnnotationLink which have the argument as their child.

findShapeAnnotationLink(Annotation) - Method in class ome.model.roi.Shape

find all ome.model.annotations.ShapeAnnotationLink which have the argument as their child.

findTarget(Object) - Method in class ome.util.ModelMapper

known immutables are return unchanged.

findWellAnnotationLink(Annotation) - Method in class ome.model.screen.Well

find all ome.model.annotations.WellAnnotationLink which have the argument as their child.

findWellReagentLink(Well) - Method in class ome.model.screen.Reagent

find all ome.model.screen.WellReagentLink which have the argument as their parent.

findWellReagentLink(Reagent) - Method in class ome.model.screen.Well

find all ome.model.screen.WellReagentLink which have the argument as their child.

finished - Variable in class ome.model.jobs.Job

FINISHED - Static variable in class ome.model.jobs.Job

finished - Variable in class ome.model.meta.DBPatch

FINISHED - Static variable in class ome.model.meta.DBPatch

firstName - Variable in class ome.model.meta.Experimenter

FIRSTNAME - Static variable in class ome.model.meta.Experimenter

FLOAT - Static variable in class ome.util.PixelData

Identifies the type used to store pixel values.

fluor - Variable in class ome.model.core.LogicalChannel

FLUOR - Static variable in class ome.model.core.LogicalChannel

Folder - Class in ome.model.containers

These filter definitions are used by the security system to eliminate non-readable objects from queries.

Folder() - Constructor for class ome.model.containers.Folder

Folder(Long) - Constructor for class ome.model.containers.Folder

Folder(Long, boolean) - Constructor for class ome.model.containers.Folder

Main constructor.

Folder(String) - Constructor for class ome.model.containers.Folder

Folder.Details - Class in ome.model.containers

FolderAnnotationLink - Class in ome.model.annotations

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FolderAnnotationLink() - Constructor for class ome.model.annotations.FolderAnnotationLink

FolderAnnotationLink(Long) - Constructor for class ome.model.annotations.FolderAnnotationLink

FolderAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.FolderAnnotationLink

Main constructor.

FolderAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.FolderAnnotationLink

FolderAnnotationLink.Details - Class in ome.model.annotations

FolderImageLink - Class in ome.model.containers

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FolderImageLink() - Constructor for class ome.model.containers.FolderImageLink

FolderImageLink(Long) - Constructor for class ome.model.containers.FolderImageLink

FolderImageLink(Long, boolean) - Constructor for class ome.model.containers.FolderImageLink

Main constructor.

FolderImageLink(IObject, IObject) - Constructor for class ome.model.containers.FolderImageLink

FolderImageLink.Details - Class in ome.model.containers

folderLinks - Variable in class ome.model.core.Image

FOLDERLINKS - Static variable in class ome.model.core.Image

folderLinks - Variable in class ome.model.roi.Roi

FOLDERLINKS - Static variable in class ome.model.roi.Roi

FOLDERLINKSCOUNTPEROWNER - Static variable in class ome.model.core.Image

FOLDERLINKSCOUNTPEROWNER - Static variable in class ome.model.roi.Roi

FolderRoiLink - Class in ome.model.containers

These filter definitions are used by the security system to eliminate non-readable objects from queries.

FolderRoiLink() - Constructor for class ome.model.containers.FolderRoiLink

FolderRoiLink(Long) - Constructor for class ome.model.containers.FolderRoiLink

FolderRoiLink(Long, boolean) - Constructor for class ome.model.containers.FolderRoiLink

Main constructor.

FolderRoiLink(IObject, IObject) - Constructor for class ome.model.containers.FolderRoiLink

FolderRoiLink.Details - Class in ome.model.containers

fontFamily - Variable in class ome.model.roi.Shape

FONTFAMILY - Static variable in class ome.model.roi.Shape

fontSize - Variable in class ome.model.roi.Shape

FONTSIZE - Static variable in class ome.model.roi.Shape

fontStyle - Variable in class ome.model.roi.Shape

FONTSTYLE - Static variable in class ome.model.roi.Shape

format - Variable in class ome.model.core.Image

FORMAT - Static variable in class ome.model.core.Image

Format - Class in ome.model.enums

Format() - Constructor for class ome.model.enums.Format

Format(Long) - Constructor for class ome.model.enums.Format

Format(Long, boolean) - Constructor for class ome.model.enums.Format

Main constructor.

Format(String) - Constructor for class ome.model.enums.Format

Format.Details - Class in ome.model.enums

Frequency - Class in ome.model.units

class storing both a Frequency and a unit for that Frequency (e.g.

Frequency() - Constructor for class ome.model.units.Frequency

Deprecated.

Frequency(double, String) - Constructor for class ome.model.units.Frequency

Frequency(double, UnitsFrequency) - Constructor for class ome.model.units.Frequency

Frequency(double, Unit<Frequency>) - Constructor for class ome.model.units.Frequency

Frequency(Frequency) - Constructor for class ome.model.units.Frequency

frequencyMultiplication - Variable in class ome.model.acquisition.Laser

FREQUENCYMULTIPLICATION - Static variable in class ome.model.acquisition.Laser

fromdbvalue(String) - Method in enum ome.model.units.UNITS

Perform the reverse lookup from todbvalue(Object) converting the DB's enums which contain invalid characters to the upper-cased CODE-based enums used elsewhere.

G

gain - Variable in class ome.model.acquisition.Detector

GAIN - Static variable in class ome.model.acquisition.Detector

gain - Variable in class ome.model.acquisition.DetectorSettings

GAIN - Static variable in class ome.model.acquisition.DetectorSettings

generate(SessionImplementor, Object) - Method in class ome.util.TableIdGenerator

GenericEnumType<E extends java.lang.Enum<E>> - Class in ome.model.units

http://octagen.at/2014/10/postgresql-custom-data-types-enum-in-hibernate/

GenericEnumType() - Constructor for class ome.model.units.GenericEnumType

GenericExcitationSource - Class in ome.model.acquisition

GenericExcitationSource() - Constructor for class ome.model.acquisition.GenericExcitationSource

GenericExcitationSource(Long) - Constructor for class ome.model.acquisition.GenericExcitationSource

GenericExcitationSource(Long, boolean) - Constructor for class ome.model.acquisition.GenericExcitationSource

Main constructor.

get(String) - Method in class ome.parameters.Parameters

lookup a QueryParameter by name.

getA00() - Method in class ome.model.roi.AffineTransform

Simple field ome.model.roi.AffineTransform.a00 (java.lang.Double)

getA01() - Method in class ome.model.roi.AffineTransform

Simple field ome.model.roi.AffineTransform.a01 (java.lang.Double)

getA02() - Method in class ome.model.roi.AffineTransform

Simple field ome.model.roi.AffineTransform.a02 (java.lang.Double)

getA10() - Method in class ome.model.roi.AffineTransform

Simple field ome.model.roi.AffineTransform.a10 (java.lang.Double)

getA11() - Method in class ome.model.roi.AffineTransform

Simple field ome.model.roi.AffineTransform.a11 (java.lang.Double)

getA12() - Method in class ome.model.roi.AffineTransform

Simple field ome.model.roi.AffineTransform.a12 (java.lang.Double)

getAcquisitionDate() - Method in class ome.model.core.Image

Simple field ome.model.core.Image.acquisitionDate (java.sql.Timestamp)

getAction() - Method in class ome.model.meta.EventLog

Simple field ome.model.meta.EventLog.action (java.lang.String)

getActive() - Method in class ome.model.display.ChannelBinding

Simple field ome.model.display.ChannelBinding.active (java.lang.Boolean)

getActive() - Method in class ome.model.display.ProjectionDef

Simple field ome.model.display.ProjectionDef.active (java.lang.Boolean)

getActive() - Method in class ome.model.meta.Share

Simple field ome.model.meta.Share.active (java.lang.Boolean)

getAirPressure() - Method in class ome.model.acquisition.ImagingEnvironment

Enum-mapped unit-based field ome.model.acquisition.ImagingEnvironment.airPressure (ome.model.units.Pressure)

getAlpha() - Method in class ome.model.core.Channel

Simple field ome.model.core.Channel.alpha (java.lang.Integer)

getAlpha() - Method in class ome.model.display.ChannelBinding

Simple field ome.model.display.ChannelBinding.alpha (java.lang.Integer)

getAlpha() - Method in class ome.model.screen.Well

Simple field ome.model.screen.Well.alpha (java.lang.Integer)

getAmplificationGain() - Method in class ome.model.acquisition.Detector

Simple field ome.model.acquisition.Detector.amplificationGain (java.lang.Double)

getAnnotationLinks() - Method in class ome.model.acquisition.Detector

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.acquisition.Dichroic

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.acquisition.Filter

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.acquisition.Instrument

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.acquisition.LightPath

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.acquisition.LightSource

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.acquisition.Objective

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.annotations.Annotation

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.containers.Dataset

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.containers.Folder

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.containers.Project

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.core.Channel

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.core.Image

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.core.OriginalFile

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.core.PlaneInfo

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.fs.Fileset

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.meta.Experimenter

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.meta.ExperimenterGroup

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.meta.Namespace

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.meta.Node

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.meta.Session

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.roi.Roi

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.roi.Shape

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.screen.Plate

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.screen.PlateAcquisition

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.screen.Reagent

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.screen.Screen

returns annotationLinks .

getAnnotationLinks() - Method in class ome.model.screen.Well

returns annotationLinks .

getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Detector

If fetched, returns the count(*) of ome.model.annotations.DetectorAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Dichroic

If fetched, returns the count(*) of ome.model.annotations.DichroicAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Filter

If fetched, returns the count(*) of ome.model.annotations.FilterAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Instrument

If fetched, returns the count(*) of ome.model.annotations.InstrumentAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.LightPath

If fetched, returns the count(*) of ome.model.annotations.LightPathAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.LightSource

If fetched, returns the count(*) of ome.model.annotations.LightSourceAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Objective

If fetched, returns the count(*) of ome.model.annotations.ObjectiveAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.annotations.Annotation

If fetched, returns the count(*) of ome.model.annotations.AnnotationAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.containers.Dataset

If fetched, returns the count(*) of ome.model.annotations.DatasetAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.containers.Folder

If fetched, returns the count(*) of ome.model.annotations.FolderAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.containers.Project

If fetched, returns the count(*) of ome.model.annotations.ProjectAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.core.Channel

If fetched, returns the count(*) of ome.model.annotations.ChannelAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.core.Image

If fetched, returns the count(*) of ome.model.annotations.ImageAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.core.OriginalFile

If fetched, returns the count(*) of ome.model.annotations.OriginalFileAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.core.PlaneInfo

If fetched, returns the count(*) of ome.model.annotations.PlaneInfoAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.fs.Fileset

If fetched, returns the count(*) of ome.model.annotations.FilesetAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.Experimenter

If fetched, returns the count(*) of ome.model.annotations.ExperimenterAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.ExperimenterGroup

If fetched, returns the count(*) of ome.model.annotations.ExperimenterGroupAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.Namespace

If fetched, returns the count(*) of ome.model.annotations.NamespaceAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.Node

If fetched, returns the count(*) of ome.model.annotations.NodeAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.Session

If fetched, returns the count(*) of ome.model.annotations.SessionAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.roi.Roi

If fetched, returns the count(*) of ome.model.annotations.RoiAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.roi.Shape

If fetched, returns the count(*) of ome.model.annotations.ShapeAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.Plate

If fetched, returns the count(*) of ome.model.annotations.PlateAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.PlateAcquisition

If fetched, returns the count(*) of ome.model.annotations.PlateAcquisitionAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.Reagent

If fetched, returns the count(*) of ome.model.annotations.ReagentAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.Screen

If fetched, returns the count(*) of ome.model.annotations.ScreenAnnotationLink that a user has.

getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.Well

If fetched, returns the count(*) of ome.model.annotations.WellAnnotationLink that a user has.

getArchived() - Method in class ome.model.core.Image

Simple field ome.model.core.Image.archived (java.lang.Boolean)

getAtime() - Method in class ome.model.core.OriginalFile

Simple field ome.model.core.OriginalFile.atime (java.sql.Timestamp)

getAttenuation() - Method in class ome.model.acquisition.LightSettings

Simple field ome.model.acquisition.LightSettings.attenuation (java.lang.Double)

getAxis() - Method in class ome.model.display.ProjectionDef

Many-to-one field ome.model.display.ProjectionDef.axis (ome.model.enums.ProjectionAxis)

getBinning() - Method in class ome.model.acquisition.DetectorSettings

Many-to-one field ome.model.acquisition.DetectorSettings.binning (ome.model.enums.Binning)

getBitDepth(String) - Static method in class ome.util.PixelData

Retrieves the bit width of a particular PixelsType.

getBitResolution() - Method in class ome.model.display.QuantumDef

Simple field ome.model.display.QuantumDef.bitResolution (java.lang.Integer)

getBitSize() - Method in class ome.model.enums.PixelsType

Simple field ome.model.enums.PixelsType.bitSize (java.lang.Integer)

getBlue() - Method in class ome.model.core.Channel

Simple field ome.model.core.Channel.blue (java.lang.Integer)

getBlue() - Method in class ome.model.display.ChannelBinding

Simple field ome.model.display.ChannelBinding.blue (java.lang.Integer)

getBlue() - Method in class ome.model.screen.Well

Simple field ome.model.screen.Well.blue (java.lang.Integer)

getBoolValue() - Method in class ome.model.annotations.BooleanAnnotation

Simple field ome.model.annotations.BooleanAnnotation.boolValue (java.lang.Boolean)

getBytes() - Method in class ome.model.roi.Mask

Simple field ome.model.roi.Mask.bytes (byte[])

getCalibratedMagnification() - Method in class ome.model.acquisition.Objective

Simple field ome.model.acquisition.Objective.calibratedMagnification (java.lang.Double)

getCdEnd() - Method in class ome.model.display.QuantumDef

Simple field ome.model.display.QuantumDef.cdEnd (java.lang.Integer)

getCdStart() - Method in class ome.model.display.QuantumDef

Simple field ome.model.display.QuantumDef.cdStart (java.lang.Integer)

getChannel(int) - Method in class ome.model.core.Pixels

Gets the ome.model.core.Channel at the given index.

getChannelBinding() - Method in class ome.model.display.CodomainMapContext

Many-to-one field ome.model.display.CodomainMapContext.channelBinding (ome.model.display.ChannelBinding)

getChannelBinding(int) - Method in class ome.model.display.RenderingDef

Gets the ome.model.display.ChannelBinding at the given index.

getChannels() - Method in class ome.model.core.LogicalChannel

returns channels .

getChannels() - Method in class ome.model.core.Pixels

returns channels .

getChild() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink

Many-to-one field ome.model.acquisition.FilterSetEmissionFilterLink.child (ome.model.acquisition.Filter)

getChild() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink

Many-to-one field ome.model.acquisition.FilterSetExcitationFilterLink.child (ome.model.acquisition.Filter)

getChild() - Method in class ome.model.acquisition.LightPathEmissionFilterLink

Many-to-one field ome.model.acquisition.LightPathEmissionFilterLink.child (ome.model.acquisition.Filter)

getChild() - Method in class ome.model.acquisition.LightPathExcitationFilterLink

Many-to-one field ome.model.acquisition.LightPathExcitationFilterLink.child (ome.model.acquisition.Filter)

getChild() - Method in class ome.model.annotations.AnnotationAnnotationLink

Many-to-one field ome.model.annotations.AnnotationAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ChannelAnnotationLink

Many-to-one field ome.model.annotations.ChannelAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.DatasetAnnotationLink

Many-to-one field ome.model.annotations.DatasetAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.DetectorAnnotationLink

Many-to-one field ome.model.annotations.DetectorAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.DichroicAnnotationLink

Many-to-one field ome.model.annotations.DichroicAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ExperimenterAnnotationLink

Many-to-one field ome.model.annotations.ExperimenterAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink

Many-to-one field ome.model.annotations.ExperimenterGroupAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.FilesetAnnotationLink

Many-to-one field ome.model.annotations.FilesetAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.FilterAnnotationLink

Many-to-one field ome.model.annotations.FilterAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.FolderAnnotationLink

Many-to-one field ome.model.annotations.FolderAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ImageAnnotationLink

Many-to-one field ome.model.annotations.ImageAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.InstrumentAnnotationLink

Many-to-one field ome.model.annotations.InstrumentAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.LightPathAnnotationLink

Many-to-one field ome.model.annotations.LightPathAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.LightSourceAnnotationLink

Many-to-one field ome.model.annotations.LightSourceAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.NamespaceAnnotationLink

Many-to-one field ome.model.annotations.NamespaceAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.NodeAnnotationLink

Many-to-one field ome.model.annotations.NodeAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ObjectiveAnnotationLink

Many-to-one field ome.model.annotations.ObjectiveAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.OriginalFileAnnotationLink

Many-to-one field ome.model.annotations.OriginalFileAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.PlaneInfoAnnotationLink

Many-to-one field ome.model.annotations.PlaneInfoAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink

Many-to-one field ome.model.annotations.PlateAcquisitionAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.PlateAnnotationLink

Many-to-one field ome.model.annotations.PlateAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ProjectAnnotationLink

Many-to-one field ome.model.annotations.ProjectAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ReagentAnnotationLink

Many-to-one field ome.model.annotations.ReagentAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.RoiAnnotationLink

Many-to-one field ome.model.annotations.RoiAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ScreenAnnotationLink

Many-to-one field ome.model.annotations.ScreenAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.SessionAnnotationLink

Many-to-one field ome.model.annotations.SessionAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.ShapeAnnotationLink

Many-to-one field ome.model.annotations.ShapeAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.annotations.WellAnnotationLink

Many-to-one field ome.model.annotations.WellAnnotationLink.child (ome.model.annotations.Annotation)

getChild() - Method in class ome.model.containers.DatasetImageLink

Many-to-one field ome.model.containers.DatasetImageLink.child (ome.model.core.Image)

getChild() - Method in class ome.model.containers.FolderImageLink

Many-to-one field ome.model.containers.FolderImageLink.child (ome.model.core.Image)

getChild() - Method in class ome.model.containers.FolderRoiLink

Many-to-one field ome.model.containers.FolderRoiLink.child (ome.model.roi.Roi)

getChild() - Method in class ome.model.containers.ProjectDatasetLink

Many-to-one field ome.model.containers.ProjectDatasetLink.child (ome.model.containers.Dataset)

getChild() - Method in class ome.model.core.PixelsOriginalFileMap

Many-to-one field ome.model.core.PixelsOriginalFileMap.child (ome.model.core.Pixels)

getChild() - Method in class ome.model.fs.FilesetJobLink

Many-to-one field ome.model.fs.FilesetJobLink.child (ome.model.jobs.Job)

getChild() - Method in interface ome.model.ILink

getChild() - Method in class ome.model.jobs.JobOriginalFileLink

Many-to-one field ome.model.jobs.JobOriginalFileLink.child (ome.model.core.OriginalFile)

getChild() - Method in class ome.model.meta.GroupExperimenterMap

Many-to-one field ome.model.meta.GroupExperimenterMap.child (ome.model.meta.Experimenter)

getChild() - Method in class ome.model.meta.ShareMember

Many-to-one field ome.model.meta.ShareMember.child (ome.model.meta.Experimenter)

getChild() - Method in class ome.model.screen.ScreenPlateLink

Many-to-one field ome.model.screen.ScreenPlateLink.child (ome.model.screen.Plate)

getChild() - Method in class ome.model.screen.WellReagentLink

Many-to-one field ome.model.screen.WellReagentLink.child (ome.model.screen.Reagent)

getChildFolders() - Method in class ome.model.containers.Folder

returns childFolders .

getClientPath() - Method in class ome.model.fs.FilesetEntry

Simple field ome.model.fs.FilesetEntry.clientPath (java.lang.String)

getClosed() - Method in class ome.model.meta.Session

Simple field ome.model.meta.Session.closed (java.sql.Timestamp)

getCo2percent() - Method in class ome.model.acquisition.ImagingEnvironment

Simple field ome.model.acquisition.ImagingEnvironment.co2percent (java.lang.Double)

getCodomainMapContext(int) - Method in class ome.model.display.ChannelBinding

Gets the ome.model.display.CodomainMapContext at the given index.

getCoefficient() - Method in class ome.model.display.ChannelBinding

Simple field ome.model.display.ChannelBinding.coefficient (java.lang.Double)

getColumn() - Method in class ome.model.screen.Well

Simple field ome.model.screen.Well.column (java.lang.Integer)

getColumnNamingConvention() - Method in class ome.model.screen.Plate

Simple field ome.model.screen.Plate.columnNamingConvention (java.lang.String)

getColumns() - Method in class ome.model.screen.Plate

Simple field ome.model.screen.Plate.columns (java.lang.Integer)

getCompression() - Method in class ome.model.display.RenderingDef

Simple field ome.model.display.RenderingDef.compression (java.lang.Double)

getConfig() - Method in class ome.model.meta.Experimenter

getConfig() - Method in class ome.model.meta.ExperimenterGroup

getConn() - Method in class ome.model.meta.Node

Simple field ome.model.meta.Node.conn (java.lang.String)

getConstant() - Method in class ome.model.display.PlaneSlicingContext

Simple field ome.model.display.PlaneSlicingContext.constant (java.lang.Boolean)

getContainingEvent() - Method in class ome.model.meta.Event

Many-to-one field ome.model.meta.Event.containingEvent (ome.model.meta.Event)

getContext() - Method in class ome.model.internal.Details

reference to the entity which this Details is contained in.

getContrastMethod() - Method in class ome.model.core.LogicalChannel

Many-to-one field ome.model.core.LogicalChannel.contrastMethod (ome.model.enums.ContrastMethod)

getCorrection() - Method in class ome.model.acquisition.Objective

Many-to-one field ome.model.acquisition.Objective.correction (ome.model.enums.Correction)

getCorrectionCollar() - Method in class ome.model.acquisition.ObjectiveSettings

Simple field ome.model.acquisition.ObjectiveSettings.correctionCollar (java.lang.Double)

getCreationEvent() - Method in class ome.model.acquisition.Detector.Details

getCreationEvent() - Method in class ome.model.acquisition.DetectorSettings.Details

getCreationEvent() - Method in class ome.model.acquisition.Dichroic.Details

getCreationEvent() - Method in class ome.model.acquisition.Filter.Details

getCreationEvent() - Method in class ome.model.acquisition.FilterSet.Details

getCreationEvent() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink.Details

getCreationEvent() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink.Details

getCreationEvent() - Method in class ome.model.acquisition.ImagingEnvironment.Details

getCreationEvent() - Method in class ome.model.acquisition.Instrument.Details

getCreationEvent() - Method in class ome.model.acquisition.LightPath.Details

getCreationEvent() - Method in class ome.model.acquisition.LightPathEmissionFilterLink.Details

getCreationEvent() - Method in class ome.model.acquisition.LightPathExcitationFilterLink.Details

getCreationEvent() - Method in class ome.model.acquisition.LightSettings.Details

getCreationEvent() - Method in class ome.model.acquisition.LightSource.Details

getCreationEvent() - Method in class ome.model.acquisition.Microscope.Details

getCreationEvent() - Method in class ome.model.acquisition.Objective.Details

getCreationEvent() - Method in class ome.model.acquisition.ObjectiveSettings.Details

getCreationEvent() - Method in class ome.model.acquisition.OTF.Details

getCreationEvent() - Method in class ome.model.acquisition.StageLabel.Details

getCreationEvent() - Method in class ome.model.acquisition.TransmittanceRange.Details

getCreationEvent() - Method in class ome.model.annotations.Annotation.Details

getCreationEvent() - Method in class ome.model.annotations.AnnotationAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.ChannelAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.DatasetAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.DetectorAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.DichroicAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.ExperimenterAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.FilesetAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.FilterAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.FolderAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.ImageAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.InstrumentAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.LightPathAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.LightSourceAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.NamespaceAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.NodeAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.ObjectiveAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.OriginalFileAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.PlaneInfoAnnotationLink.Details

getCreationEvent() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink.Details

getCreationEvent()