- gain - Variable in class ome.model.acquisition.Detector
-
- GAIN - Static variable in class ome.model.acquisition.Detector
-
- gain - Variable in class ome.model.acquisition.DetectorSettings
-
- GAIN - Static variable in class ome.model.acquisition.DetectorSettings
-
- generate(SessionImplementor, Object) - Method in class ome.util.TableIdGenerator
-
- GenericEnumType<E extends java.lang.Enum<E>> - Class in ome.model.units
-
http://octagen.at/2014/10/postgresql-custom-data-types-enum-in-hibernate/
- GenericEnumType() - Constructor for class ome.model.units.GenericEnumType
-
- GenericExcitationSource - Class in ome.model.acquisition
-
- GenericExcitationSource() - Constructor for class ome.model.acquisition.GenericExcitationSource
-
- GenericExcitationSource(Long) - Constructor for class ome.model.acquisition.GenericExcitationSource
-
- GenericExcitationSource(Long, boolean) - Constructor for class ome.model.acquisition.GenericExcitationSource
-
Main constructor.
- get(String) - Method in class ome.parameters.Parameters
-
lookup a QueryParameter by name.
- getA00() - Method in class ome.model.roi.AffineTransform
-
Simple field ome.model.roi.AffineTransform.a00 (java.lang.Double)
- getA01() - Method in class ome.model.roi.AffineTransform
-
Simple field ome.model.roi.AffineTransform.a01 (java.lang.Double)
- getA02() - Method in class ome.model.roi.AffineTransform
-
Simple field ome.model.roi.AffineTransform.a02 (java.lang.Double)
- getA10() - Method in class ome.model.roi.AffineTransform
-
Simple field ome.model.roi.AffineTransform.a10 (java.lang.Double)
- getA11() - Method in class ome.model.roi.AffineTransform
-
Simple field ome.model.roi.AffineTransform.a11 (java.lang.Double)
- getA12() - Method in class ome.model.roi.AffineTransform
-
Simple field ome.model.roi.AffineTransform.a12 (java.lang.Double)
- getAcquisitionDate() - Method in class ome.model.core.Image
-
Simple field ome.model.core.Image.acquisitionDate (java.sql.Timestamp)
- getAction() - Method in class ome.model.meta.EventLog
-
Simple field ome.model.meta.EventLog.action (java.lang.String)
- getActive() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.active (java.lang.Boolean)
- getActive() - Method in class ome.model.display.ProjectionDef
-
Simple field ome.model.display.ProjectionDef.active (java.lang.Boolean)
- getActive() - Method in class ome.model.meta.Share
-
Simple field ome.model.meta.Share.active (java.lang.Boolean)
- getAirPressure() - Method in class ome.model.acquisition.ImagingEnvironment
-
Enum-mapped unit-based field ome.model.acquisition.ImagingEnvironment.airPressure (ome.model.units.Pressure)
- getAlpha() - Method in class ome.model.core.Channel
-
Simple field ome.model.core.Channel.alpha (java.lang.Integer)
- getAlpha() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.alpha (java.lang.Integer)
- getAlpha() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.alpha (java.lang.Integer)
- getAmplificationGain() - Method in class ome.model.acquisition.Detector
-
Simple field ome.model.acquisition.Detector.amplificationGain (java.lang.Double)
- getAnnotationLinks() - Method in class ome.model.acquisition.Detector
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.acquisition.Dichroic
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.acquisition.Filter
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.acquisition.Instrument
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.acquisition.LightPath
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.acquisition.LightSource
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.acquisition.Objective
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.annotations.Annotation
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.containers.Dataset
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.containers.Folder
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.containers.Project
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.core.Channel
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.core.Image
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.core.OriginalFile
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.core.PlaneInfo
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.fs.Fileset
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.meta.Experimenter
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.meta.ExperimenterGroup
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.meta.Namespace
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.meta.Node
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.meta.Session
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.roi.Roi
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.roi.Shape
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.screen.Plate
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.screen.PlateAcquisition
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.screen.Reagent
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.screen.Screen
-
returns annotationLinks .
- getAnnotationLinks() - Method in class ome.model.screen.Well
-
returns annotationLinks .
- getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Detector
-
If fetched, returns the count(*) of ome.model.annotations.DetectorAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Dichroic
-
If fetched, returns the count(*) of ome.model.annotations.DichroicAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Filter
-
If fetched, returns the count(*) of ome.model.annotations.FilterAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Instrument
-
If fetched, returns the count(*) of ome.model.annotations.InstrumentAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.LightPath
-
If fetched, returns the count(*) of ome.model.annotations.LightPathAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.LightSource
-
If fetched, returns the count(*) of ome.model.annotations.LightSourceAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.acquisition.Objective
-
If fetched, returns the count(*) of ome.model.annotations.ObjectiveAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.annotations.Annotation
-
If fetched, returns the count(*) of ome.model.annotations.AnnotationAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.containers.Dataset
-
If fetched, returns the count(*) of ome.model.annotations.DatasetAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.containers.Folder
-
If fetched, returns the count(*) of ome.model.annotations.FolderAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.containers.Project
-
If fetched, returns the count(*) of ome.model.annotations.ProjectAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.core.Channel
-
If fetched, returns the count(*) of ome.model.annotations.ChannelAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.core.Image
-
If fetched, returns the count(*) of ome.model.annotations.ImageAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.core.OriginalFile
-
If fetched, returns the count(*) of ome.model.annotations.OriginalFileAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.core.PlaneInfo
-
If fetched, returns the count(*) of ome.model.annotations.PlaneInfoAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.fs.Fileset
-
If fetched, returns the count(*) of ome.model.annotations.FilesetAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.Experimenter
-
If fetched, returns the count(*) of ome.model.annotations.ExperimenterAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.ExperimenterGroup
-
If fetched, returns the count(*) of ome.model.annotations.ExperimenterGroupAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.Namespace
-
If fetched, returns the count(*) of ome.model.annotations.NamespaceAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.Node
-
If fetched, returns the count(*) of ome.model.annotations.NodeAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.meta.Session
-
If fetched, returns the count(*) of ome.model.annotations.SessionAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.roi.Roi
-
If fetched, returns the count(*) of ome.model.annotations.RoiAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.roi.Shape
-
If fetched, returns the count(*) of ome.model.annotations.ShapeAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.Plate
-
If fetched, returns the count(*) of ome.model.annotations.PlateAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.PlateAcquisition
-
If fetched, returns the count(*) of ome.model.annotations.PlateAcquisitionAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.Reagent
-
If fetched, returns the count(*) of ome.model.annotations.ReagentAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.Screen
-
If fetched, returns the count(*) of ome.model.annotations.ScreenAnnotationLink that a user has.
- getAnnotationLinksCountPerOwner() - Method in class ome.model.screen.Well
-
If fetched, returns the count(*) of ome.model.annotations.WellAnnotationLink that a user has.
- getArchived() - Method in class ome.model.core.Image
-
Simple field ome.model.core.Image.archived (java.lang.Boolean)
- getAtime() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.atime (java.sql.Timestamp)
- getAttenuation() - Method in class ome.model.acquisition.LightSettings
-
Simple field ome.model.acquisition.LightSettings.attenuation (java.lang.Double)
- getAxis() - Method in class ome.model.display.ProjectionDef
-
Many-to-one field ome.model.display.ProjectionDef.axis (ome.model.enums.ProjectionAxis)
- getBinning() - Method in class ome.model.acquisition.DetectorSettings
-
Many-to-one field ome.model.acquisition.DetectorSettings.binning (ome.model.enums.Binning)
- getBitDepth(String) - Static method in class ome.util.PixelData
-
Retrieves the bit width of a particular PixelsType
.
- getBitResolution() - Method in class ome.model.display.QuantumDef
-
Simple field ome.model.display.QuantumDef.bitResolution (java.lang.Integer)
- getBitSize() - Method in class ome.model.enums.PixelsType
-
Simple field ome.model.enums.PixelsType.bitSize (java.lang.Integer)
- getBlue() - Method in class ome.model.core.Channel
-
Simple field ome.model.core.Channel.blue (java.lang.Integer)
- getBlue() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.blue (java.lang.Integer)
- getBlue() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.blue (java.lang.Integer)
- getBoolValue() - Method in class ome.model.annotations.BooleanAnnotation
-
Simple field ome.model.annotations.BooleanAnnotation.boolValue (java.lang.Boolean)
- getBytes() - Method in class ome.model.roi.Mask
-
Simple field ome.model.roi.Mask.bytes (byte[])
- getCalibratedMagnification() - Method in class ome.model.acquisition.Objective
-
Simple field ome.model.acquisition.Objective.calibratedMagnification (java.lang.Double)
- getCdEnd() - Method in class ome.model.display.QuantumDef
-
Simple field ome.model.display.QuantumDef.cdEnd (java.lang.Integer)
- getCdStart() - Method in class ome.model.display.QuantumDef
-
Simple field ome.model.display.QuantumDef.cdStart (java.lang.Integer)
- getChannel(int) - Method in class ome.model.core.Pixels
-
Gets the ome.model.core.Channel at the given index.
- getChannelBinding() - Method in class ome.model.display.CodomainMapContext
-
Many-to-one field ome.model.display.CodomainMapContext.channelBinding (ome.model.display.ChannelBinding)
- getChannelBinding(int) - Method in class ome.model.display.RenderingDef
-
Gets the ome.model.display.ChannelBinding at the given index.
- getChannels() - Method in class ome.model.core.LogicalChannel
-
returns channels .
- getChannels() - Method in class ome.model.core.Pixels
-
returns channels .
- getChild() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink
-
Many-to-one field ome.model.acquisition.FilterSetEmissionFilterLink.child (ome.model.acquisition.Filter)
- getChild() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink
-
Many-to-one field ome.model.acquisition.FilterSetExcitationFilterLink.child (ome.model.acquisition.Filter)
- getChild() - Method in class ome.model.acquisition.LightPathEmissionFilterLink
-
Many-to-one field ome.model.acquisition.LightPathEmissionFilterLink.child (ome.model.acquisition.Filter)
- getChild() - Method in class ome.model.acquisition.LightPathExcitationFilterLink
-
Many-to-one field ome.model.acquisition.LightPathExcitationFilterLink.child (ome.model.acquisition.Filter)
- getChild() - Method in class ome.model.annotations.AnnotationAnnotationLink
-
Many-to-one field ome.model.annotations.AnnotationAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ChannelAnnotationLink
-
Many-to-one field ome.model.annotations.ChannelAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.DatasetAnnotationLink
-
Many-to-one field ome.model.annotations.DatasetAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.DetectorAnnotationLink
-
Many-to-one field ome.model.annotations.DetectorAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.DichroicAnnotationLink
-
Many-to-one field ome.model.annotations.DichroicAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ExperimenterAnnotationLink
-
Many-to-one field ome.model.annotations.ExperimenterAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink
-
Many-to-one field ome.model.annotations.ExperimenterGroupAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.FilesetAnnotationLink
-
Many-to-one field ome.model.annotations.FilesetAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.FilterAnnotationLink
-
Many-to-one field ome.model.annotations.FilterAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.FolderAnnotationLink
-
Many-to-one field ome.model.annotations.FolderAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ImageAnnotationLink
-
Many-to-one field ome.model.annotations.ImageAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.InstrumentAnnotationLink
-
Many-to-one field ome.model.annotations.InstrumentAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.LightPathAnnotationLink
-
Many-to-one field ome.model.annotations.LightPathAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.LightSourceAnnotationLink
-
Many-to-one field ome.model.annotations.LightSourceAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.NamespaceAnnotationLink
-
Many-to-one field ome.model.annotations.NamespaceAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.NodeAnnotationLink
-
Many-to-one field ome.model.annotations.NodeAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ObjectiveAnnotationLink
-
Many-to-one field ome.model.annotations.ObjectiveAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.OriginalFileAnnotationLink
-
Many-to-one field ome.model.annotations.OriginalFileAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.PlaneInfoAnnotationLink
-
Many-to-one field ome.model.annotations.PlaneInfoAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink
-
Many-to-one field ome.model.annotations.PlateAcquisitionAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.PlateAnnotationLink
-
Many-to-one field ome.model.annotations.PlateAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ProjectAnnotationLink
-
Many-to-one field ome.model.annotations.ProjectAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ReagentAnnotationLink
-
Many-to-one field ome.model.annotations.ReagentAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.RoiAnnotationLink
-
Many-to-one field ome.model.annotations.RoiAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ScreenAnnotationLink
-
Many-to-one field ome.model.annotations.ScreenAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.SessionAnnotationLink
-
Many-to-one field ome.model.annotations.SessionAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.ShapeAnnotationLink
-
Many-to-one field ome.model.annotations.ShapeAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.annotations.WellAnnotationLink
-
Many-to-one field ome.model.annotations.WellAnnotationLink.child (ome.model.annotations.Annotation)
- getChild() - Method in class ome.model.containers.DatasetImageLink
-
Many-to-one field ome.model.containers.DatasetImageLink.child (ome.model.core.Image)
- getChild() - Method in class ome.model.containers.FolderImageLink
-
Many-to-one field ome.model.containers.FolderImageLink.child (ome.model.core.Image)
- getChild() - Method in class ome.model.containers.FolderRoiLink
-
Many-to-one field ome.model.containers.FolderRoiLink.child (ome.model.roi.Roi)
- getChild() - Method in class ome.model.containers.ProjectDatasetLink
-
Many-to-one field ome.model.containers.ProjectDatasetLink.child (ome.model.containers.Dataset)
- getChild() - Method in class ome.model.core.PixelsOriginalFileMap
-
Many-to-one field ome.model.core.PixelsOriginalFileMap.child (ome.model.core.Pixels)
- getChild() - Method in class ome.model.fs.FilesetJobLink
-
Many-to-one field ome.model.fs.FilesetJobLink.child (ome.model.jobs.Job)
- getChild() - Method in interface ome.model.ILink
-
- getChild() - Method in class ome.model.jobs.JobOriginalFileLink
-
Many-to-one field ome.model.jobs.JobOriginalFileLink.child (ome.model.core.OriginalFile)
- getChild() - Method in class ome.model.meta.GroupExperimenterMap
-
Many-to-one field ome.model.meta.GroupExperimenterMap.child (ome.model.meta.Experimenter)
- getChild() - Method in class ome.model.meta.ShareMember
-
Many-to-one field ome.model.meta.ShareMember.child (ome.model.meta.Experimenter)
- getChild() - Method in class ome.model.screen.ScreenPlateLink
-
Many-to-one field ome.model.screen.ScreenPlateLink.child (ome.model.screen.Plate)
- getChild() - Method in class ome.model.screen.WellReagentLink
-
Many-to-one field ome.model.screen.WellReagentLink.child (ome.model.screen.Reagent)
- getChildFolders() - Method in class ome.model.containers.Folder
-
returns childFolders .
- getClientPath() - Method in class ome.model.fs.FilesetEntry
-
Simple field ome.model.fs.FilesetEntry.clientPath (java.lang.String)
- getClosed() - Method in class ome.model.meta.Session
-
Simple field ome.model.meta.Session.closed (java.sql.Timestamp)
- getCo2percent() - Method in class ome.model.acquisition.ImagingEnvironment
-
Simple field ome.model.acquisition.ImagingEnvironment.co2percent (java.lang.Double)
- getCodomainMapContext(int) - Method in class ome.model.display.ChannelBinding
-
Gets the ome.model.display.CodomainMapContext at the given index.
- getCoefficient() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.coefficient (java.lang.Double)
- getColumn() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.column (java.lang.Integer)
- getColumnNamingConvention() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.columnNamingConvention (java.lang.String)
- getColumns() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.columns (java.lang.Integer)
- getCompression() - Method in class ome.model.display.RenderingDef
-
Simple field ome.model.display.RenderingDef.compression (java.lang.Double)
- getConfig() - Method in class ome.model.meta.Experimenter
-
- getConfig() - Method in class ome.model.meta.ExperimenterGroup
-
- getConn() - Method in class ome.model.meta.Node
-
Simple field ome.model.meta.Node.conn (java.lang.String)
- getConstant() - Method in class ome.model.display.PlaneSlicingContext
-
Simple field ome.model.display.PlaneSlicingContext.constant (java.lang.Boolean)
- getContainingEvent() - Method in class ome.model.meta.Event
-
Many-to-one field ome.model.meta.Event.containingEvent (ome.model.meta.Event)
- getContext() - Method in class ome.model.internal.Details
-
reference to the entity which this Details is contained in.
- getContrastMethod() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.contrastMethod (ome.model.enums.ContrastMethod)
- getCorrection() - Method in class ome.model.acquisition.Objective
-
Many-to-one field ome.model.acquisition.Objective.correction (ome.model.enums.Correction)
- getCorrectionCollar() - Method in class ome.model.acquisition.ObjectiveSettings
-
Simple field ome.model.acquisition.ObjectiveSettings.correctionCollar (java.lang.Double)
- getCreationEvent() - Method in class ome.model.acquisition.Detector.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.DetectorSettings.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.Dichroic.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.Filter.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.FilterSet.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.ImagingEnvironment.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.Instrument.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.LightPath.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.LightPathEmissionFilterLink.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.LightPathExcitationFilterLink.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.LightSettings.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.LightSource.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.Microscope.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.Objective.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.ObjectiveSettings.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.OTF.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.StageLabel.Details
-
- getCreationEvent() - Method in class ome.model.acquisition.TransmittanceRange.Details
-
- getCreationEvent() - Method in class ome.model.annotations.Annotation.Details
-
- getCreationEvent() - Method in class ome.model.annotations.AnnotationAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ChannelAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.DatasetAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.DetectorAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.DichroicAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ExperimenterAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.FilesetAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.FilterAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.FolderAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ImageAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.InstrumentAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.LightPathAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.LightSourceAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.NamespaceAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.NodeAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ObjectiveAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.OriginalFileAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.PlaneInfoAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.PlateAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ProjectAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ReagentAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.RoiAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ScreenAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.SessionAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.ShapeAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.annotations.WellAnnotationLink.Details
-
- getCreationEvent() - Method in class ome.model.containers.Dataset.Details
-
- getCreationEvent() - Method in class ome.model.containers.DatasetImageLink.Details
-
- getCreationEvent() - Method in class ome.model.containers.Folder.Details
-
- getCreationEvent() - Method in class ome.model.containers.FolderImageLink.Details
-
- getCreationEvent() - Method in class ome.model.containers.FolderRoiLink.Details
-
- getCreationEvent() - Method in class ome.model.containers.Project.Details
-
- getCreationEvent() - Method in class ome.model.containers.ProjectDatasetLink.Details
-
- getCreationEvent() - Method in class ome.model.core.Channel.Details
-
- getCreationEvent() - Method in class ome.model.core.Image.Details
-
- getCreationEvent() - Method in class ome.model.core.LogicalChannel.Details
-
- getCreationEvent() - Method in class ome.model.core.OriginalFile.Details
-
- getCreationEvent() - Method in class ome.model.core.Pixels.Details
-
- getCreationEvent() - Method in class ome.model.core.PixelsOriginalFileMap.Details
-
- getCreationEvent() - Method in class ome.model.core.PlaneInfo.Details
-
- getCreationEvent() - Method in class ome.model.display.ChannelBinding.Details
-
- getCreationEvent() - Method in class ome.model.display.CodomainMapContext.Details
-
- getCreationEvent() - Method in class ome.model.display.ProjectionDef.Details
-
- getCreationEvent() - Method in class ome.model.display.QuantumDef.Details
-
- getCreationEvent() - Method in class ome.model.display.RenderingDef.Details
-
- getCreationEvent() - Method in class ome.model.display.Thumbnail.Details
-
- getCreationEvent() - Method in class ome.model.experiment.Experiment.Details
-
- getCreationEvent() - Method in class ome.model.experiment.MicrobeamManipulation.Details
-
- getCreationEvent() - Method in class ome.model.fs.Fileset.Details
-
- getCreationEvent() - Method in class ome.model.fs.FilesetEntry.Details
-
- getCreationEvent() - Method in class ome.model.fs.FilesetJobLink.Details
-
- getCreationEvent() - Method in interface ome.model.IDetails
-
- getCreationEvent() - Method in class ome.model.internal.Details
-
- getCreationEvent() - Method in class ome.model.internal.Link.Details
-
- getCreationEvent() - Method in class ome.model.jobs.Job.Details
-
- getCreationEvent() - Method in class ome.model.jobs.JobOriginalFileLink.Details
-
- getCreationEvent() - Method in class ome.model.meta.ExternalInfo.Details
-
- getCreationEvent() - Method in class ome.model.roi.AffineTransform.Details
-
- getCreationEvent() - Method in class ome.model.roi.Roi.Details
-
- getCreationEvent() - Method in class ome.model.roi.Shape.Details
-
- getCreationEvent() - Method in class ome.model.screen.Plate.Details
-
- getCreationEvent() - Method in class ome.model.screen.PlateAcquisition.Details
-
- getCreationEvent() - Method in class ome.model.screen.Reagent.Details
-
- getCreationEvent() - Method in class ome.model.screen.Screen.Details
-
- getCreationEvent() - Method in class ome.model.screen.ScreenPlateLink.Details
-
- getCreationEvent() - Method in class ome.model.screen.Well.Details
-
- getCreationEvent() - Method in class ome.model.screen.WellReagentLink.Details
-
- getCreationEvent() - Method in class ome.model.screen.WellSample.Details
-
- getCreationEvent() - Method in class ome.model.stats.StatsInfo.Details
-
- getCtime() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.ctime (java.sql.Timestamp)
- getCurrentPatch() - Method in class ome.model.meta.DBPatch
-
Simple field ome.model.meta.DBPatch.currentPatch (java.lang.Integer)
- getCurrentVersion() - Method in class ome.model.meta.DBPatch
-
Simple field ome.model.meta.DBPatch.currentVersion (java.lang.String)
- getCutIn() - Method in class ome.model.acquisition.TransmittanceRange
-
Enum-mapped unit-based field ome.model.acquisition.TransmittanceRange.cutIn (ome.model.units.Length)
- getCutInTolerance() - Method in class ome.model.acquisition.TransmittanceRange
-
Enum-mapped unit-based field ome.model.acquisition.TransmittanceRange.cutInTolerance (ome.model.units.Length)
- getCutOut() - Method in class ome.model.acquisition.TransmittanceRange
-
Enum-mapped unit-based field ome.model.acquisition.TransmittanceRange.cutOut (ome.model.units.Length)
- getCutOutTolerance() - Method in class ome.model.acquisition.TransmittanceRange
-
Enum-mapped unit-based field ome.model.acquisition.TransmittanceRange.cutOutTolerance (ome.model.units.Length)
- getD() - Method in class ome.model.roi.Path
-
Deprecated.
Simple field ome.model.roi.Path.d (java.lang.String)
- getData() - Method in class ome.model.meta.Share
-
Simple field ome.model.meta.Share.data (byte[])
- getData() - Method in class ome.util.PixelData
-
Returns the backing buffer for the pixel data.
- getDatasetLinks() - Method in class ome.model.containers.Project
-
returns datasetLinks .
- getDatasetLinks() - Method in class ome.model.core.Image
-
returns datasetLinks .
- getDatasetLinksCountPerOwner() - Method in class ome.model.containers.Project
-
If fetched, returns the count(*) of ome.model.containers.ProjectDatasetLink that a user has.
- getDatasetLinksCountPerOwner() - Method in class ome.model.core.Image
-
If fetched, returns the count(*) of ome.model.containers.DatasetImageLink that a user has.
- getDefaultEventType() - Method in class ome.model.meta.Session
-
Simple field ome.model.meta.Session.defaultEventType (java.lang.String)
- getDefaultSample() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.defaultSample (java.lang.Integer)
- getDefaultT() - Method in class ome.model.display.RenderingDef
-
Simple field ome.model.display.RenderingDef.defaultT (java.lang.Integer)
- getDefaultZ() - Method in class ome.model.display.RenderingDef
-
Simple field ome.model.display.RenderingDef.defaultZ (java.lang.Integer)
- getDeletedIds(String) - Method in class ome.util.actions.PostgresSqlAction
-
- getDeletedIds(String) - Method in interface ome.util.SqlAction
-
- getDeltaT() - Method in class ome.model.core.PlaneInfo
-
Enum-mapped unit-based field ome.model.core.PlaneInfo.deltaT (ome.model.units.Time)
- getDescription() - Method in class ome.model.annotations.Annotation
-
Simple field ome.model.annotations.Annotation.description (java.lang.String)
- getDescription() - Method in class ome.model.containers.Dataset
-
Simple field ome.model.containers.Dataset.description (java.lang.String)
- getDescription() - Method in class ome.model.containers.Folder
-
Simple field ome.model.containers.Folder.description (java.lang.String)
- getDescription() - Method in class ome.model.containers.Project
-
Simple field ome.model.containers.Project.description (java.lang.String)
- getDescription() - Method in class ome.model.core.Image
-
Simple field ome.model.core.Image.description (java.lang.String)
- getDescription() - Method in class ome.model.experiment.Experiment
-
Simple field ome.model.experiment.Experiment.description (java.lang.String)
- getDescription() - Method in class ome.model.experiment.MicrobeamManipulation
-
Simple field ome.model.experiment.MicrobeamManipulation.description (java.lang.String)
- getDescription() - Method in class ome.model.jobs.ScriptJob
-
Simple field ome.model.jobs.ScriptJob.description (java.lang.String)
- getDescription() - Method in class ome.model.meta.ExperimenterGroup
-
Simple field ome.model.meta.ExperimenterGroup.description (java.lang.String)
- getDescription() - Method in class ome.model.meta.Namespace
-
Simple field ome.model.meta.Namespace.description (java.lang.String)
- getDescription() - Method in class ome.model.roi.Roi
-
Simple field ome.model.roi.Roi.description (java.lang.String)
- getDescription() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.description (java.lang.String)
- getDescription() - Method in class ome.model.screen.PlateAcquisition
-
Simple field ome.model.screen.PlateAcquisition.description (java.lang.String)
- getDescription() - Method in class ome.model.screen.Reagent
-
Simple field ome.model.screen.Reagent.description (java.lang.String)
- getDescription() - Method in class ome.model.screen.Screen
-
Simple field ome.model.screen.Screen.description (java.lang.String)
- getDetails() - Method in class ome.model.acquisition.Detector
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.DetectorSettings
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.Dichroic
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.Filter
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.FilterSet
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.ImagingEnvironment
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.Instrument
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.LightPath
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.LightPathEmissionFilterLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.LightPathExcitationFilterLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.LightSettings
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.LightSource
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.Microscope
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.Objective
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.ObjectiveSettings
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.OTF
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.StageLabel
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.acquisition.TransmittanceRange
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.Annotation
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.AnnotationAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ChannelAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.DatasetAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.DetectorAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.DichroicAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ExperimenterAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.FilesetAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.FilterAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.FolderAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ImageAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.InstrumentAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.LightPathAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.LightSourceAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.NamespaceAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.NodeAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ObjectiveAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.OriginalFileAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.PlaneInfoAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.PlateAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ProjectAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ReagentAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.RoiAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ScreenAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.SessionAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.ShapeAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.annotations.WellAnnotationLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.containers.Dataset
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.containers.DatasetImageLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.containers.Folder
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.containers.FolderImageLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.containers.FolderRoiLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.containers.Project
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.containers.ProjectDatasetLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.core.Channel
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.core.Image
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.core.LogicalChannel
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.core.OriginalFile
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.core.Pixels
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.core.PixelsOriginalFileMap
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.core.PlaneInfo
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.display.ChannelBinding
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.display.CodomainMapContext
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.display.ProjectionDef
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.display.QuantumDef
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.display.RenderingDef
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.display.Thumbnail
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.AcquisitionMode
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.AdminPrivilege
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.ArcType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.Binning
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.ChecksumAlgorithm
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.ContrastMethod
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.Correction
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.DetectorType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.DimensionOrder
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.EventType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.ExperimentType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.Family
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.FilamentType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.FilterType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.Format
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.Illumination
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.Immersion
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.LaserMedium
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.LaserType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.Medium
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.MicrobeamManipulationType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.MicroscopeType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.PhotometricInterpretation
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.PixelsType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.ProjectionAxis
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.ProjectionType
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.Pulse
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.enums.RenderingModel
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.experiment.Experiment
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.experiment.MicrobeamManipulation
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.fs.Fileset
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.fs.FilesetEntry
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.fs.FilesetJobLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.internal.Link
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in interface ome.model.IObject
-
Value (i.e.
- getDetails() - Method in class ome.model.jobs.Job
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.jobs.JobOriginalFileLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.jobs.JobStatus
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.DBPatch
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.Event
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.EventLog
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.Experimenter
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.ExperimenterGroup
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.ExternalInfo
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.GroupExperimenterMap
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.Namespace
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.Node
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.Session
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.meta.ShareMember
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.roi.AffineTransform
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.roi.Roi
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.roi.Shape
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.screen.Plate
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.screen.PlateAcquisition
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.screen.Reagent
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.screen.Screen
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.screen.ScreenPlateLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.screen.Well
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.screen.WellReagentLink
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.screen.WellSample
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.model.stats.StatsInfo
-
The details of this object correspond to low-level system
information.
- getDetails() - Method in class ome.util.PermDetails
-
- getDetector() - Method in class ome.model.acquisition.DetectorSettings
-
Many-to-one field ome.model.acquisition.DetectorSettings.detector (ome.model.acquisition.Detector)
- getDetector() - Method in class ome.model.acquisition.Instrument
-
returns detector .
- getDetectorSettings() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.detectorSettings (ome.model.acquisition.DetectorSettings)
- getDichroic() - Method in class ome.model.acquisition.FilterSet
-
Many-to-one field ome.model.acquisition.FilterSet.dichroic (ome.model.acquisition.Dichroic)
- getDichroic() - Method in class ome.model.acquisition.Instrument
-
returns dichroic .
- getDichroic() - Method in class ome.model.acquisition.LightPath
-
Many-to-one field ome.model.acquisition.LightPath.dichroic (ome.model.acquisition.Dichroic)
- getDimensionOrder() - Method in class ome.model.core.Pixels
-
Many-to-one field ome.model.core.Pixels.dimensionOrder (ome.model.enums.DimensionOrder)
- getDisplay() - Method in class ome.model.meta.Namespace
-
Simple field ome.model.meta.Namespace.display (java.lang.Boolean)
- getDisplayName() - Method in class ome.model.meta.Namespace
-
Simple field ome.model.meta.Namespace.displayName (java.lang.String)
- getDoubleValue() - Method in class ome.model.annotations.DoubleAnnotation
-
Simple field ome.model.annotations.DoubleAnnotation.doubleValue (java.lang.Double)
- getDown() - Method in class ome.model.meta.Node
-
Simple field ome.model.meta.Node.down (java.sql.Timestamp)
- getEmail() - Method in class ome.model.meta.Experimenter
-
Simple field ome.model.meta.Experimenter.email (java.lang.String)
- getEmissionFilterLink() - Method in class ome.model.acquisition.Filter
-
returns emissionFilterLink .
- getEmissionFilterLink() - Method in class ome.model.acquisition.FilterSet
-
returns emissionFilterLink .
- getEmissionFilterLink() - Method in class ome.model.acquisition.LightPath
-
returns emissionFilterLink .
- getEmissionFilterLinkCountPerOwner() - Method in class ome.model.acquisition.Filter
-
If fetched, returns the count(*) of ome.model.acquisition.FilterSetEmissionFilterLink that a user has.
- getEmissionFilterLinkCountPerOwner() - Method in class ome.model.acquisition.FilterSet
-
If fetched, returns the count(*) of ome.model.acquisition.FilterSetEmissionFilterLink that a user has.
- getEmissionFilterLinkCountPerOwner() - Method in class ome.model.acquisition.LightPath
-
If fetched, returns the count(*) of ome.model.acquisition.LightPathEmissionFilterLink that a user has.
- getEmissionWave() - Method in class ome.model.core.LogicalChannel
-
Enum-mapped unit-based field ome.model.core.LogicalChannel.emissionWave (ome.model.units.Length)
- getEndPlane() - Method in class ome.model.display.ProjectionDef
-
Simple field ome.model.display.ProjectionDef.endPlane (java.lang.Integer)
- getEndTime() - Method in class ome.model.screen.PlateAcquisition
-
Simple field ome.model.screen.PlateAcquisition.endTime (java.sql.Timestamp)
- getEndTime() - Method in class ome.parameters.Parameters
-
- getEntityId() - Method in class ome.model.meta.EventLog
-
Simple field ome.model.meta.EventLog.entityId (java.lang.Long)
- getEntityId() - Method in class ome.model.meta.ExternalInfo
-
Simple field ome.model.meta.ExternalInfo.entityId (java.lang.Long)
- getEntityType() - Method in class ome.model.meta.EventLog
-
Simple field ome.model.meta.EventLog.entityType (java.lang.String)
- getEntityType() - Method in class ome.model.meta.ExternalInfo
-
Simple field ome.model.meta.ExternalInfo.entityType (java.lang.String)
- getEvent() - Method in class ome.model.meta.EventLog
-
Many-to-one field ome.model.meta.EventLog.event (ome.model.meta.Event)
- getEventLogPartitions(Collection<String>, Collection<String>, long, long) - Method in interface ome.util.SqlAction
-
Loads up to "limit" event logs using partioning so that only the
last event log of a particular (type, id) pair is returned.
- getEventLogPartitions(Collection<String>, Collection<String>, long, long) - Method in class ome.util.SqlAction.Impl
-
- getEventLogPercent(String) - Method in interface ome.util.SqlAction
-
Returns the percent (e.g.
- getEventLogPercent(String) - Method in class ome.util.SqlAction.Impl
-
- getEvents() - Method in class ome.model.meta.Session
-
returns events .
- getExcitationFilterLink() - Method in class ome.model.acquisition.Filter
-
returns excitationFilterLink .
- getExcitationFilterLink() - Method in class ome.model.acquisition.FilterSet
-
returns excitationFilterLink .
- getExcitationFilterLink() - Method in class ome.model.acquisition.LightPath
-
returns excitationFilterLink .
- getExcitationFilterLinkCountPerOwner() - Method in class ome.model.acquisition.Filter
-
If fetched, returns the count(*) of ome.model.acquisition.FilterSetExcitationFilterLink that a user has.
- getExcitationFilterLinkCountPerOwner() - Method in class ome.model.acquisition.FilterSet
-
If fetched, returns the count(*) of ome.model.acquisition.FilterSetExcitationFilterLink that a user has.
- getExcitationFilterLinkCountPerOwner() - Method in class ome.model.acquisition.LightPath
-
If fetched, returns the count(*) of ome.model.acquisition.LightPathExcitationFilterLink that a user has.
- getExcitationWave() - Method in class ome.model.core.LogicalChannel
-
Enum-mapped unit-based field ome.model.core.LogicalChannel.excitationWave (ome.model.units.Length)
- getExperiment() - Method in class ome.model.core.Image
-
Many-to-one field ome.model.core.Image.experiment (ome.model.experiment.Experiment)
- getExperiment() - Method in class ome.model.experiment.MicrobeamManipulation
-
Many-to-one field ome.model.experiment.MicrobeamManipulation.experiment (ome.model.experiment.Experiment)
- getExperimenter() - Method in class ome.model.meta.Event
-
Many-to-one field ome.model.meta.Event.experimenter (ome.model.meta.Experimenter)
- getExperimenter() - Method in class ome.parameters.Parameters
-
Fulfills the old PojoOptions requirement for returning null if no
owner set.
- getExperimenterGroup() - Method in class ome.model.meta.Event
-
Many-to-one field ome.model.meta.Event.experimenterGroup (ome.model.meta.ExperimenterGroup)
- getExposureTime() - Method in class ome.model.core.PlaneInfo
-
Enum-mapped unit-based field ome.model.core.PlaneInfo.exposureTime (ome.model.units.Time)
- getExternalDescription() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.externalDescription (java.lang.String)
- getExternalIdentifier() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.externalIdentifier (java.lang.String)
- getExternalIdentifier() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.externalIdentifier (java.lang.String)
- getExternalInfo() - Method in class ome.model.acquisition.Detector.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.DetectorSettings.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.Dichroic.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.Filter.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.FilterSet.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.ImagingEnvironment.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.Instrument.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.LightPath.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.LightPathEmissionFilterLink.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.LightPathExcitationFilterLink.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.LightSettings.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.LightSource.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.Microscope.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.Objective.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.ObjectiveSettings.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.OTF.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.StageLabel.Details
-
- getExternalInfo() - Method in class ome.model.acquisition.TransmittanceRange.Details
-
- getExternalInfo() - Method in class ome.model.annotations.Annotation.Details
-
- getExternalInfo() - Method in class ome.model.annotations.AnnotationAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ChannelAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.DatasetAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.DetectorAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.DichroicAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ExperimenterAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.FilesetAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.FilterAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.FolderAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ImageAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.InstrumentAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.LightPathAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.LightSourceAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.NamespaceAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.NodeAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ObjectiveAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.OriginalFileAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.PlaneInfoAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.PlateAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ProjectAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ReagentAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.RoiAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ScreenAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.SessionAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.ShapeAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.annotations.WellAnnotationLink.Details
-
- getExternalInfo() - Method in class ome.model.containers.Dataset.Details
-
- getExternalInfo() - Method in class ome.model.containers.DatasetImageLink.Details
-
- getExternalInfo() - Method in class ome.model.containers.Folder.Details
-
- getExternalInfo() - Method in class ome.model.containers.FolderImageLink.Details
-
- getExternalInfo() - Method in class ome.model.containers.FolderRoiLink.Details
-
- getExternalInfo() - Method in class ome.model.containers.Project.Details
-
- getExternalInfo() - Method in class ome.model.containers.ProjectDatasetLink.Details
-
- getExternalInfo() - Method in class ome.model.core.Channel.Details
-
- getExternalInfo() - Method in class ome.model.core.Image.Details
-
- getExternalInfo() - Method in class ome.model.core.LogicalChannel.Details
-
- getExternalInfo() - Method in class ome.model.core.OriginalFile.Details
-
- getExternalInfo() - Method in class ome.model.core.Pixels.Details
-
- getExternalInfo() - Method in class ome.model.core.PixelsOriginalFileMap.Details
-
- getExternalInfo() - Method in class ome.model.core.PlaneInfo.Details
-
- getExternalInfo() - Method in class ome.model.display.ChannelBinding.Details
-
- getExternalInfo() - Method in class ome.model.display.CodomainMapContext.Details
-
- getExternalInfo() - Method in class ome.model.display.ProjectionDef.Details
-
- getExternalInfo() - Method in class ome.model.display.QuantumDef.Details
-
- getExternalInfo() - Method in class ome.model.display.RenderingDef.Details
-
- getExternalInfo() - Method in class ome.model.display.Thumbnail.Details
-
- getExternalInfo() - Method in class ome.model.enums.AcquisitionMode.Details
-
- getExternalInfo() - Method in class ome.model.enums.AdminPrivilege.Details
-
- getExternalInfo() - Method in class ome.model.enums.ArcType.Details
-
- getExternalInfo() - Method in class ome.model.enums.Binning.Details
-
- getExternalInfo() - Method in class ome.model.enums.ChecksumAlgorithm.Details
-
- getExternalInfo() - Method in class ome.model.enums.ContrastMethod.Details
-
- getExternalInfo() - Method in class ome.model.enums.Correction.Details
-
- getExternalInfo() - Method in class ome.model.enums.DetectorType.Details
-
- getExternalInfo() - Method in class ome.model.enums.DimensionOrder.Details
-
- getExternalInfo() - Method in class ome.model.enums.EventType.Details
-
- getExternalInfo() - Method in class ome.model.enums.ExperimentType.Details
-
- getExternalInfo() - Method in class ome.model.enums.Family.Details
-
- getExternalInfo() - Method in class ome.model.enums.FilamentType.Details
-
- getExternalInfo() - Method in class ome.model.enums.FilterType.Details
-
- getExternalInfo() - Method in class ome.model.enums.Format.Details
-
- getExternalInfo() - Method in class ome.model.enums.Illumination.Details
-
- getExternalInfo() - Method in class ome.model.enums.Immersion.Details
-
- getExternalInfo() - Method in class ome.model.enums.LaserMedium.Details
-
- getExternalInfo() - Method in class ome.model.enums.LaserType.Details
-
- getExternalInfo() - Method in class ome.model.enums.Medium.Details
-
- getExternalInfo() - Method in class ome.model.enums.MicrobeamManipulationType.Details
-
- getExternalInfo() - Method in class ome.model.enums.MicroscopeType.Details
-
- getExternalInfo() - Method in class ome.model.enums.PhotometricInterpretation.Details
-
- getExternalInfo() - Method in class ome.model.enums.PixelsType.Details
-
- getExternalInfo() - Method in class ome.model.enums.ProjectionAxis.Details
-
- getExternalInfo() - Method in class ome.model.enums.ProjectionType.Details
-
- getExternalInfo() - Method in class ome.model.enums.Pulse.Details
-
- getExternalInfo() - Method in class ome.model.enums.RenderingModel.Details
-
- getExternalInfo() - Method in class ome.model.experiment.Experiment.Details
-
- getExternalInfo() - Method in class ome.model.experiment.MicrobeamManipulation.Details
-
- getExternalInfo() - Method in class ome.model.fs.Fileset.Details
-
- getExternalInfo() - Method in class ome.model.fs.FilesetEntry.Details
-
- getExternalInfo() - Method in class ome.model.fs.FilesetJobLink.Details
-
- getExternalInfo() - Method in class ome.model.internal.Details
-
- getExternalInfo() - Method in class ome.model.internal.Link.Details
-
- getExternalInfo() - Method in class ome.model.jobs.Job.Details
-
- getExternalInfo() - Method in class ome.model.jobs.JobOriginalFileLink.Details
-
- getExternalInfo() - Method in class ome.model.jobs.JobStatus.Details
-
- getExternalInfo() - Method in class ome.model.meta.DBPatch.Details
-
- getExternalInfo() - Method in class ome.model.meta.Event.Details
-
- getExternalInfo() - Method in class ome.model.meta.EventLog.Details
-
- getExternalInfo() - Method in class ome.model.meta.Experimenter.Details
-
- getExternalInfo() - Method in class ome.model.meta.ExperimenterGroup.Details
-
- getExternalInfo() - Method in class ome.model.meta.ExternalInfo.Details
-
- getExternalInfo() - Method in class ome.model.meta.GroupExperimenterMap.Details
-
- getExternalInfo() - Method in class ome.model.meta.Namespace.Details
-
- getExternalInfo() - Method in class ome.model.meta.Node.Details
-
- getExternalInfo() - Method in class ome.model.meta.Session.Details
-
- getExternalInfo() - Method in class ome.model.meta.ShareMember.Details
-
- getExternalInfo() - Method in class ome.model.roi.AffineTransform.Details
-
- getExternalInfo() - Method in class ome.model.roi.Roi.Details
-
- getExternalInfo() - Method in class ome.model.roi.Shape.Details
-
- getExternalInfo() - Method in class ome.model.screen.Plate.Details
-
- getExternalInfo() - Method in class ome.model.screen.PlateAcquisition.Details
-
- getExternalInfo() - Method in class ome.model.screen.Reagent.Details
-
- getExternalInfo() - Method in class ome.model.screen.Screen.Details
-
- getExternalInfo() - Method in class ome.model.screen.ScreenPlateLink.Details
-
- getExternalInfo() - Method in class ome.model.screen.Well.Details
-
- getExternalInfo() - Method in class ome.model.screen.WellReagentLink.Details
-
- getExternalInfo() - Method in class ome.model.screen.WellSample.Details
-
- getExternalInfo() - Method in class ome.model.stats.StatsInfo.Details
-
- getFamily() - Method in class ome.model.display.ChannelBinding
-
Many-to-one field ome.model.display.ChannelBinding.family (ome.model.enums.Family)
- getFile() - Method in class ome.model.annotations.FileAnnotation
-
Many-to-one field ome.model.annotations.FileAnnotation.file (ome.model.core.OriginalFile)
- getFileset() - Method in class ome.model.core.Image
-
Many-to-one field ome.model.core.Image.fileset (ome.model.fs.Fileset)
- getFileset() - Method in class ome.model.fs.FilesetEntry
-
Many-to-one field ome.model.fs.FilesetEntry.fileset (ome.model.fs.Fileset)
- getFilesetEntries() - Method in class ome.model.core.OriginalFile
-
returns filesetEntries .
- getFilesetEntry(int) - Method in class ome.model.fs.Fileset
-
Gets the ome.model.fs.FilesetEntry at the given index.
- getFilesetJobLink(int) - Method in class ome.model.fs.Fileset
-
Gets the ome.model.fs.FilesetJobLink at the given index.
- getFillColor() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.fillColor (java.lang.Integer)
- getFillRule() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.fillRule (java.lang.String)
- getFilter() - Method in class ome.model.acquisition.Instrument
-
returns filter .
- getFilter() - Method in class ome.util.PrivilegedStringTypeDescriptor.FilteredFullAdmin
-
- getFilter() - Method in class ome.util.PrivilegedStringTypeDescriptor.FilteredRelatedUser
-
- getFilter() - Method in class ome.util.PrivilegedStringTypeDescriptor
-
- getFilterFailure() - Method in class ome.util.PrivilegedStringTypeDescriptor.FilteredFullAdminHidden
-
- getFilterFailure() - Method in class ome.util.PrivilegedStringTypeDescriptor.FilteredFullAdminUUID
-
- getFilterFailure() - Method in class ome.util.PrivilegedStringTypeDescriptor.FilteredRelatedUserHidden
-
- getFilterFailure() - Method in class ome.util.PrivilegedStringTypeDescriptor
-
- getFilterSet() - Method in class ome.model.acquisition.Instrument
-
returns filterSet .
- getFilterSet() - Method in class ome.model.acquisition.OTF
-
Many-to-one field ome.model.acquisition.OTF.filterSet (ome.model.acquisition.FilterSet)
- getFilterSet() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.filterSet (ome.model.acquisition.FilterSet)
- getFilterWheel() - Method in class ome.model.acquisition.Filter
-
Simple field ome.model.acquisition.Filter.filterWheel (java.lang.String)
- getFinished() - Method in class ome.model.jobs.Job
-
Simple field ome.model.jobs.Job.finished (java.sql.Timestamp)
- getFinished() - Method in class ome.model.meta.DBPatch
-
Simple field ome.model.meta.DBPatch.finished (java.sql.Timestamp)
- getFirstName() - Method in class ome.model.meta.Experimenter
-
Simple field ome.model.meta.Experimenter.firstName (java.lang.String)
- getFluor() - Method in class ome.model.core.LogicalChannel
-
Simple field ome.model.core.LogicalChannel.fluor (java.lang.String)
- getFolderLinks() - Method in class ome.model.core.Image
-
returns folderLinks .
- getFolderLinks() - Method in class ome.model.roi.Roi
-
returns folderLinks .
- getFolderLinksCountPerOwner() - Method in class ome.model.core.Image
-
If fetched, returns the count(*) of ome.model.containers.FolderImageLink that a user has.
- getFolderLinksCountPerOwner() - Method in class ome.model.roi.Roi
-
If fetched, returns the count(*) of ome.model.containers.FolderRoiLink that a user has.
- getFontFamily() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.fontFamily (java.lang.String)
- getFontSize() - Method in class ome.model.roi.Shape
-
Enum-mapped unit-based field ome.model.roi.Shape.fontSize (ome.model.units.Length)
- getFontStyle() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.fontStyle (java.lang.String)
- getFormat() - Method in class ome.model.core.Image
-
Many-to-one field ome.model.core.Image.format (ome.model.enums.Format)
- getFrequencyMultiplication() - Method in class ome.model.acquisition.Laser
-
Simple field ome.model.acquisition.Laser.frequencyMultiplication (java.lang.Integer)
- getGain() - Method in class ome.model.acquisition.Detector
-
Simple field ome.model.acquisition.Detector.gain (java.lang.Double)
- getGain() - Method in class ome.model.acquisition.DetectorSettings
-
Simple field ome.model.acquisition.DetectorSettings.gain (java.lang.Double)
- getGlobalMax() - Method in class ome.model.stats.StatsInfo
-
Simple field ome.model.stats.StatsInfo.globalMax (java.lang.Double)
- getGlobalMin() - Method in class ome.model.stats.StatsInfo
-
Simple field ome.model.stats.StatsInfo.globalMin (java.lang.Double)
- getGraphHolder() - Method in class ome.model.acquisition.Detector
-
- getGraphHolder() - Method in class ome.model.acquisition.DetectorSettings
-
- getGraphHolder() - Method in class ome.model.acquisition.Dichroic
-
- getGraphHolder() - Method in class ome.model.acquisition.Filter
-
- getGraphHolder() - Method in class ome.model.acquisition.FilterSet
-
- getGraphHolder() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink
-
- getGraphHolder() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink
-
- getGraphHolder() - Method in class ome.model.acquisition.ImagingEnvironment
-
- getGraphHolder() - Method in class ome.model.acquisition.Instrument
-
- getGraphHolder() - Method in class ome.model.acquisition.LightPath
-
- getGraphHolder() - Method in class ome.model.acquisition.LightPathEmissionFilterLink
-
- getGraphHolder() - Method in class ome.model.acquisition.LightPathExcitationFilterLink
-
- getGraphHolder() - Method in class ome.model.acquisition.LightSettings
-
- getGraphHolder() - Method in class ome.model.acquisition.LightSource
-
- getGraphHolder() - Method in class ome.model.acquisition.Microscope
-
- getGraphHolder() - Method in class ome.model.acquisition.Objective
-
- getGraphHolder() - Method in class ome.model.acquisition.ObjectiveSettings
-
- getGraphHolder() - Method in class ome.model.acquisition.OTF
-
- getGraphHolder() - Method in class ome.model.acquisition.StageLabel
-
- getGraphHolder() - Method in class ome.model.acquisition.TransmittanceRange
-
- getGraphHolder() - Method in class ome.model.annotations.Annotation
-
- getGraphHolder() - Method in class ome.model.annotations.AnnotationAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ChannelAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.DatasetAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.DetectorAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.DichroicAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ExperimenterAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.FilesetAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.FilterAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.FolderAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ImageAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.InstrumentAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.LightPathAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.LightSourceAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.NamespaceAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.NodeAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ObjectiveAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.OriginalFileAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.PlaneInfoAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.PlateAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ProjectAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ReagentAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.RoiAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ScreenAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.SessionAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.ShapeAnnotationLink
-
- getGraphHolder() - Method in class ome.model.annotations.WellAnnotationLink
-
- getGraphHolder() - Method in class ome.model.containers.Dataset
-
- getGraphHolder() - Method in class ome.model.containers.DatasetImageLink
-
- getGraphHolder() - Method in class ome.model.containers.Folder
-
- getGraphHolder() - Method in class ome.model.containers.FolderImageLink
-
- getGraphHolder() - Method in class ome.model.containers.FolderRoiLink
-
- getGraphHolder() - Method in class ome.model.containers.Project
-
- getGraphHolder() - Method in class ome.model.containers.ProjectDatasetLink
-
- getGraphHolder() - Method in class ome.model.core.Channel
-
- getGraphHolder() - Method in class ome.model.core.Image
-
- getGraphHolder() - Method in class ome.model.core.LogicalChannel
-
- getGraphHolder() - Method in class ome.model.core.OriginalFile
-
- getGraphHolder() - Method in class ome.model.core.Pixels
-
- getGraphHolder() - Method in class ome.model.core.PixelsOriginalFileMap
-
- getGraphHolder() - Method in class ome.model.core.PlaneInfo
-
- getGraphHolder() - Method in class ome.model.display.ChannelBinding
-
- getGraphHolder() - Method in class ome.model.display.CodomainMapContext
-
- getGraphHolder() - Method in class ome.model.display.ProjectionDef
-
- getGraphHolder() - Method in class ome.model.display.QuantumDef
-
- getGraphHolder() - Method in class ome.model.display.RenderingDef
-
- getGraphHolder() - Method in class ome.model.display.Thumbnail
-
- getGraphHolder() - Method in class ome.model.enums.AcquisitionMode
-
- getGraphHolder() - Method in class ome.model.enums.AdminPrivilege
-
- getGraphHolder() - Method in class ome.model.enums.ArcType
-
- getGraphHolder() - Method in class ome.model.enums.Binning
-
- getGraphHolder() - Method in class ome.model.enums.ChecksumAlgorithm
-
- getGraphHolder() - Method in class ome.model.enums.ContrastMethod
-
- getGraphHolder() - Method in class ome.model.enums.Correction
-
- getGraphHolder() - Method in class ome.model.enums.DetectorType
-
- getGraphHolder() - Method in class ome.model.enums.DimensionOrder
-
- getGraphHolder() - Method in class ome.model.enums.EventType
-
- getGraphHolder() - Method in class ome.model.enums.ExperimentType
-
- getGraphHolder() - Method in class ome.model.enums.Family
-
- getGraphHolder() - Method in class ome.model.enums.FilamentType
-
- getGraphHolder() - Method in class ome.model.enums.FilterType
-
- getGraphHolder() - Method in class ome.model.enums.Format
-
- getGraphHolder() - Method in class ome.model.enums.Illumination
-
- getGraphHolder() - Method in class ome.model.enums.Immersion
-
- getGraphHolder() - Method in class ome.model.enums.LaserMedium
-
- getGraphHolder() - Method in class ome.model.enums.LaserType
-
- getGraphHolder() - Method in class ome.model.enums.Medium
-
- getGraphHolder() - Method in class ome.model.enums.MicrobeamManipulationType
-
- getGraphHolder() - Method in class ome.model.enums.MicroscopeType
-
- getGraphHolder() - Method in class ome.model.enums.PhotometricInterpretation
-
- getGraphHolder() - Method in class ome.model.enums.PixelsType
-
- getGraphHolder() - Method in class ome.model.enums.ProjectionAxis
-
- getGraphHolder() - Method in class ome.model.enums.ProjectionType
-
- getGraphHolder() - Method in class ome.model.enums.Pulse
-
- getGraphHolder() - Method in class ome.model.enums.RenderingModel
-
- getGraphHolder() - Method in class ome.model.experiment.Experiment
-
- getGraphHolder() - Method in class ome.model.experiment.MicrobeamManipulation
-
- getGraphHolder() - Method in class ome.model.fs.Fileset
-
- getGraphHolder() - Method in class ome.model.fs.FilesetEntry
-
- getGraphHolder() - Method in class ome.model.fs.FilesetJobLink
-
- getGraphHolder() - Method in class ome.model.internal.Link
-
- getGraphHolder() - Method in interface ome.model.IObject
-
- getGraphHolder() - Method in class ome.model.jobs.Job
-
- getGraphHolder() - Method in class ome.model.jobs.JobOriginalFileLink
-
- getGraphHolder() - Method in class ome.model.jobs.JobStatus
-
- getGraphHolder() - Method in class ome.model.meta.DBPatch
-
- getGraphHolder() - Method in class ome.model.meta.Event
-
- getGraphHolder() - Method in class ome.model.meta.EventLog
-
- getGraphHolder() - Method in class ome.model.meta.Experimenter
-
- getGraphHolder() - Method in class ome.model.meta.ExperimenterGroup
-
- getGraphHolder() - Method in class ome.model.meta.ExternalInfo
-
- getGraphHolder() - Method in class ome.model.meta.GroupExperimenterMap
-
- getGraphHolder() - Method in class ome.model.meta.Namespace
-
- getGraphHolder() - Method in class ome.model.meta.Node
-
- getGraphHolder() - Method in class ome.model.meta.Session
-
- getGraphHolder() - Method in class ome.model.meta.ShareMember
-
- getGraphHolder() - Method in class ome.model.roi.AffineTransform
-
- getGraphHolder() - Method in class ome.model.roi.Roi
-
- getGraphHolder() - Method in class ome.model.roi.Shape
-
- getGraphHolder() - Method in class ome.model.screen.Plate
-
- getGraphHolder() - Method in class ome.model.screen.PlateAcquisition
-
- getGraphHolder() - Method in class ome.model.screen.Reagent
-
- getGraphHolder() - Method in class ome.model.screen.Screen
-
- getGraphHolder() - Method in class ome.model.screen.ScreenPlateLink
-
- getGraphHolder() - Method in class ome.model.screen.Well
-
- getGraphHolder() - Method in class ome.model.screen.WellReagentLink
-
- getGraphHolder() - Method in class ome.model.screen.WellSample
-
- getGraphHolder() - Method in class ome.model.stats.StatsInfo
-
- getGraphHolder() - Method in class ome.util.PermDetails
-
- getGreen() - Method in class ome.model.core.Channel
-
Simple field ome.model.core.Channel.green (java.lang.Integer)
- getGreen() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.green (java.lang.Integer)
- getGreen() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.green (java.lang.Integer)
- getGroup() - Method in class ome.model.acquisition.Detector.Details
-
- getGroup() - Method in class ome.model.acquisition.DetectorSettings.Details
-
- getGroup() - Method in class ome.model.acquisition.Dichroic.Details
-
- getGroup() - Method in class ome.model.acquisition.Filter.Details
-
- getGroup() - Method in class ome.model.acquisition.FilterSet.Details
-
- getGroup() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink.Details
-
- getGroup() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink.Details
-
- getGroup() - Method in class ome.model.acquisition.ImagingEnvironment.Details
-
- getGroup() - Method in class ome.model.acquisition.Instrument.Details
-
- getGroup() - Method in class ome.model.acquisition.LightPath.Details
-
- getGroup() - Method in class ome.model.acquisition.LightPathEmissionFilterLink.Details
-
- getGroup() - Method in class ome.model.acquisition.LightPathExcitationFilterLink.Details
-
- getGroup() - Method in class ome.model.acquisition.LightSettings.Details
-
- getGroup() - Method in class ome.model.acquisition.LightSource.Details
-
- getGroup() - Method in class ome.model.acquisition.Microscope.Details
-
- getGroup() - Method in class ome.model.acquisition.Objective.Details
-
- getGroup() - Method in class ome.model.acquisition.ObjectiveSettings.Details
-
- getGroup() - Method in class ome.model.acquisition.OTF.Details
-
- getGroup() - Method in class ome.model.acquisition.StageLabel.Details
-
- getGroup() - Method in class ome.model.acquisition.TransmittanceRange.Details
-
- getGroup() - Method in class ome.model.annotations.Annotation.Details
-
- getGroup() - Method in class ome.model.annotations.AnnotationAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ChannelAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.DatasetAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.DetectorAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.DichroicAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ExperimenterAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.FilesetAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.FilterAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.FolderAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ImageAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.InstrumentAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.LightPathAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.LightSourceAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.NamespaceAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.NodeAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ObjectiveAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.OriginalFileAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.PlaneInfoAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.PlateAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ProjectAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ReagentAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.RoiAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ScreenAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.SessionAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.ShapeAnnotationLink.Details
-
- getGroup() - Method in class ome.model.annotations.WellAnnotationLink.Details
-
- getGroup() - Method in class ome.model.containers.Dataset.Details
-
- getGroup() - Method in class ome.model.containers.DatasetImageLink.Details
-
- getGroup() - Method in class ome.model.containers.Folder.Details
-
- getGroup() - Method in class ome.model.containers.FolderImageLink.Details
-
- getGroup() - Method in class ome.model.containers.FolderRoiLink.Details
-
- getGroup() - Method in class ome.model.containers.Project.Details
-
- getGroup() - Method in class ome.model.containers.ProjectDatasetLink.Details
-
- getGroup() - Method in class ome.model.core.Channel.Details
-
- getGroup() - Method in class ome.model.core.Image.Details
-
- getGroup() - Method in class ome.model.core.LogicalChannel.Details
-
- getGroup() - Method in class ome.model.core.OriginalFile.Details
-
- getGroup() - Method in class ome.model.core.Pixels.Details
-
- getGroup() - Method in class ome.model.core.PixelsOriginalFileMap.Details
-
- getGroup() - Method in class ome.model.core.PlaneInfo.Details
-
- getGroup() - Method in class ome.model.display.ChannelBinding.Details
-
- getGroup() - Method in class ome.model.display.CodomainMapContext.Details
-
- getGroup() - Method in class ome.model.display.ProjectionDef.Details
-
- getGroup() - Method in class ome.model.display.QuantumDef.Details
-
- getGroup() - Method in class ome.model.display.RenderingDef.Details
-
- getGroup() - Method in class ome.model.display.Thumbnail.Details
-
- getGroup() - Method in class ome.model.experiment.Experiment.Details
-
- getGroup() - Method in class ome.model.experiment.MicrobeamManipulation.Details
-
- getGroup() - Method in class ome.model.fs.Fileset.Details
-
- getGroup() - Method in class ome.model.fs.FilesetEntry.Details
-
- getGroup() - Method in class ome.model.fs.FilesetJobLink.Details
-
- getGroup() - Method in class ome.model.internal.Details
-
- getGroup() - Method in class ome.model.internal.Link.Details
-
- getGroup() - Method in class ome.model.jobs.Job.Details
-
- getGroup() - Method in class ome.model.jobs.JobOriginalFileLink.Details
-
- getGroup() - Method in class ome.model.meta.ExternalInfo.Details
-
- getGroup() - Method in class ome.model.meta.Share
-
Many-to-one field ome.model.meta.Share.group (ome.model.meta.ExperimenterGroup)
- getGroup() - Method in class ome.model.roi.AffineTransform.Details
-
- getGroup() - Method in class ome.model.roi.Roi.Details
-
- getGroup() - Method in class ome.model.roi.Shape.Details
-
- getGroup() - Method in class ome.model.screen.Plate.Details
-
- getGroup() - Method in class ome.model.screen.PlateAcquisition.Details
-
- getGroup() - Method in class ome.model.screen.Reagent.Details
-
- getGroup() - Method in class ome.model.screen.Screen.Details
-
- getGroup() - Method in class ome.model.screen.ScreenPlateLink.Details
-
- getGroup() - Method in class ome.model.screen.Well.Details
-
- getGroup() - Method in class ome.model.screen.WellReagentLink.Details
-
- getGroup() - Method in class ome.model.screen.WellSample.Details
-
- getGroup() - Method in class ome.model.stats.StatsInfo.Details
-
- getGroup() - Method in class ome.parameters.Parameters
-
Fulfills the old PojoOptions requirement for returning null if no
owner set.
- getGroupExperimenterMap() - Method in class ome.model.meta.Experimenter
-
returns groupExperimenterMap .
- getGroupExperimenterMap(int) - Method in class ome.model.meta.Experimenter
-
Gets the ome.model.meta.GroupExperimenterMap at the given index.
- getGroupExperimenterMap() - Method in class ome.model.meta.ExperimenterGroup
-
returns groupExperimenterMap .
- getGroupIds(Collection<String>) - Method in interface ome.util.SqlAction
-
- getGroupIds(Collection<String>) - Method in class ome.util.SqlAction.Impl
-
- getGroupname() - Method in class ome.model.jobs.Job
-
Simple field ome.model.jobs.Job.groupname (java.lang.String)
- getGroupPermissions(long) - Method in interface ome.util.SqlAction
-
Returns the permissions for the given group id.
- getGroupPermissions(long) - Method in class ome.util.SqlAction.Impl
-
- getHash() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.hash (java.lang.String)
- getHasher() - Method in class ome.model.core.OriginalFile
-
Many-to-one field ome.model.core.OriginalFile.hasher (ome.model.enums.ChecksumAlgorithm)
- getHeight() - Method in class ome.model.roi.Mask
-
Simple field ome.model.roi.Mask.height (java.lang.Double)
- getHeight() - Method in class ome.model.roi.Rectangle
-
Simple field ome.model.roi.Rectangle.height (java.lang.Double)
- getHumidity() - Method in class ome.model.acquisition.ImagingEnvironment
-
Simple field ome.model.acquisition.ImagingEnvironment.humidity (java.lang.Double)
- getId() - Method in class ome.model.acquisition.Detector
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.DetectorSettings
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.Dichroic
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.Filter
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.FilterSet
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.ImagingEnvironment
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.Instrument
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.LightPath
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.LightPathEmissionFilterLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.LightPathExcitationFilterLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.LightSettings
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.LightSource
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.Microscope
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.Objective
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.ObjectiveSettings
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.OTF
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.StageLabel
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.acquisition.TransmittanceRange
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.Annotation
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.AnnotationAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ChannelAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.DatasetAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.DetectorAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.DichroicAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ExperimenterAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.FilesetAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.FilterAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.FolderAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ImageAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.InstrumentAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.LightPathAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.LightSourceAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.NamespaceAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.NodeAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ObjectiveAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.OriginalFileAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.PlaneInfoAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.PlateAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ProjectAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ReagentAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.RoiAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ScreenAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.SessionAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.ShapeAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.annotations.WellAnnotationLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.containers.Dataset
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.containers.DatasetImageLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.containers.Folder
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.containers.FolderImageLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.containers.FolderRoiLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.containers.Project
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.containers.ProjectDatasetLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.core.Channel
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.core.Image
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.core.LogicalChannel
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.core.OriginalFile
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.core.Pixels
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.core.PixelsOriginalFileMap
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.core.PlaneInfo
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.display.ChannelBinding
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.display.CodomainMapContext
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.display.ProjectionDef
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.display.QuantumDef
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.display.RenderingDef
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.display.Thumbnail
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.AcquisitionMode
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.AdminPrivilege
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.ArcType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.Binning
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.ChecksumAlgorithm
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.ContrastMethod
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.Correction
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.DetectorType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.DimensionOrder
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.EventType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.ExperimentType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.Family
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.FilamentType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.FilterType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.Format
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.Illumination
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.Immersion
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.LaserMedium
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.LaserType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.Medium
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.MicrobeamManipulationType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.MicroscopeType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.PhotometricInterpretation
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.PixelsType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.ProjectionAxis
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.ProjectionType
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.Pulse
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.enums.RenderingModel
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.experiment.Experiment
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.experiment.MicrobeamManipulation
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.fs.Fileset
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.fs.FilesetEntry
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.fs.FilesetJobLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.internal.Link
-
The DB unique identifier for this object.
- getId() - Method in interface ome.model.IObject
-
primary key of this object.
- getId() - Method in class ome.model.jobs.Job
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.jobs.JobOriginalFileLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.jobs.JobStatus
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.DBPatch
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.Event
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.EventLog
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.Experimenter
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.ExperimenterGroup
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.ExternalInfo
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.GroupExperimenterMap
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.Namespace
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.Node
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.Session
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.meta.ShareMember
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.roi.AffineTransform
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.roi.Roi
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.roi.Shape
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.screen.Plate
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.screen.PlateAcquisition
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.screen.Reagent
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.screen.Screen
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.screen.ScreenPlateLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.screen.Well
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.screen.WellReagentLink
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.screen.WellSample
-
The DB unique identifier for this object.
- getId() - Method in class ome.model.stats.StatsInfo
-
The DB unique identifier for this object.
- getId() - Method in class ome.util.PermDetails
-
- getIllumination() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.illumination (ome.model.enums.Illumination)
- getImage() - Method in class ome.model.core.Pixels
-
Many-to-one field ome.model.core.Pixels.image (ome.model.core.Image)
- getImage() - Method in class ome.model.roi.Roi
-
Many-to-one field ome.model.roi.Roi.image (ome.model.core.Image)
- getImage() - Method in class ome.model.screen.WellSample
-
Many-to-one field ome.model.screen.WellSample.image (ome.model.core.Image)
- getImageDescription() - Method in class ome.model.jobs.ImportJob
-
Deprecated.
Simple field ome.model.jobs.ImportJob.imageDescription (java.lang.String)
- getImageLinks() - Method in class ome.model.containers.Dataset
-
returns imageLinks .
- getImageLinks() - Method in class ome.model.containers.Folder
-
returns imageLinks .
- getImageLinksCountPerOwner() - Method in class ome.model.containers.Dataset
-
If fetched, returns the count(*) of ome.model.containers.DatasetImageLink that a user has.
- getImageLinksCountPerOwner() - Method in class ome.model.containers.Folder
-
If fetched, returns the count(*) of ome.model.containers.FolderImageLink that a user has.
- getImageName() - Method in class ome.model.jobs.ImportJob
-
Deprecated.
Simple field ome.model.jobs.ImportJob.imageName (java.lang.String)
- getImages() - Method in class ome.model.fs.Fileset
-
returns images .
- getImagingEnvironment() - Method in class ome.model.core.Image
-
Many-to-one field ome.model.core.Image.imagingEnvironment (ome.model.acquisition.ImagingEnvironment)
- getImmersion() - Method in class ome.model.acquisition.Objective
-
Many-to-one field ome.model.acquisition.Objective.immersion (ome.model.enums.Immersion)
- getIndexes() - Method in class ome.util.LSID
-
Returns the indexes for this LSID within the OME-XML data model.
- getInputEnd() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.inputEnd (java.lang.Double)
- getInputStart() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.inputStart (java.lang.Double)
- getInstitution() - Method in class ome.model.meta.Experimenter
-
Simple field ome.model.meta.Experimenter.institution (java.lang.String)
- getInstrument() - Method in class ome.model.acquisition.Detector
-
Many-to-one field ome.model.acquisition.Detector.instrument (ome.model.acquisition.Instrument)
- getInstrument() - Method in class ome.model.acquisition.Dichroic
-
Many-to-one field ome.model.acquisition.Dichroic.instrument (ome.model.acquisition.Instrument)
- getInstrument() - Method in class ome.model.acquisition.Filter
-
Many-to-one field ome.model.acquisition.Filter.instrument (ome.model.acquisition.Instrument)
- getInstrument() - Method in class ome.model.acquisition.FilterSet
-
Many-to-one field ome.model.acquisition.FilterSet.instrument (ome.model.acquisition.Instrument)
- getInstrument() - Method in class ome.model.acquisition.LightSource
-
Many-to-one field ome.model.acquisition.LightSource.instrument (ome.model.acquisition.Instrument)
- getInstrument() - Method in class ome.model.acquisition.Objective
-
Many-to-one field ome.model.acquisition.Objective.instrument (ome.model.acquisition.Instrument)
- getInstrument() - Method in class ome.model.acquisition.OTF
-
Many-to-one field ome.model.acquisition.OTF.instrument (ome.model.acquisition.Instrument)
- getInstrument() - Method in class ome.model.core.Image
-
Many-to-one field ome.model.core.Image.instrument (ome.model.acquisition.Instrument)
- getIntegration() - Method in class ome.model.acquisition.DetectorSettings
-
Simple field ome.model.acquisition.DetectorSettings.integration (java.lang.Integer)
- getInternalContext() - Method in class ome.util.PermDetails
-
In order to properly test the permissions for this object, it must be
possible to get the internal context.
- getIris() - Method in class ome.model.acquisition.Objective
-
Simple field ome.model.acquisition.Objective.iris (java.lang.Boolean)
- getItemCount() - Method in class ome.model.meta.Share
-
Simple field ome.model.meta.Share.itemCount (java.lang.Long)
- getJavaClass() - Method in class ome.util.LSID
-
Returns the Java class which qualifies the type of object this
LSID represents.
- getJobLinks() - Method in class ome.model.fs.Fileset
-
returns jobLinks .
- getJobLinksCountPerOwner() - Method in class ome.model.fs.Fileset
-
If fetched, returns the count(*) of ome.model.fs.FilesetJobLink that a user has.
- getKeywords() - Method in class ome.model.meta.Namespace
-
Simple field ome.model.meta.Namespace.keywords (java.util.List)
- getLaserMedium() - Method in class ome.model.acquisition.Laser
-
Many-to-one field ome.model.acquisition.Laser.laserMedium (ome.model.enums.LaserMedium)
- getLastName() - Method in class ome.model.meta.Experimenter
-
Simple field ome.model.meta.Experimenter.lastName (java.lang.String)
- getLdap() - Method in class ome.model.meta.Experimenter
-
Simple field ome.model.meta.Experimenter.ldap (java.lang.Boolean)
- getLdap() - Method in class ome.model.meta.ExperimenterGroup
-
Simple field ome.model.meta.ExperimenterGroup.ldap (java.lang.Boolean)
- getLdapExperimenters() - Method in interface ome.util.SqlAction
-
Gets the experimenters who have the ldap
attribute enabled.
- getLdapExperimenters() - Method in class ome.util.SqlAction.Impl
-
- getLensNA() - Method in class ome.model.acquisition.Objective
-
Simple field ome.model.acquisition.Objective.lensNA (java.lang.Double)
- getLightPath() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.lightPath (ome.model.acquisition.LightPath)
- getLightPathExcitationFilterLink(int) - Method in class ome.model.acquisition.LightPath
-
Gets the ome.model.acquisition.LightPathExcitationFilterLink at the given index.
- getLightSource() - Method in class ome.model.acquisition.Instrument
-
returns lightSource .
- getLightSource() - Method in class ome.model.acquisition.LightSettings
-
Many-to-one field ome.model.acquisition.LightSettings.lightSource (ome.model.acquisition.LightSource)
- getLightSourceSettings() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.lightSourceSettings (ome.model.acquisition.LightSettings)
- getLightSourceSettings() - Method in class ome.model.experiment.MicrobeamManipulation
-
returns lightSourceSettings .
- getLimit() - Method in class ome.parameters.Parameters
-
- getLocked() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.locked (java.lang.Boolean)
- getLogicalChannel() - Method in class ome.model.core.Channel
-
Many-to-one field ome.model.core.Channel.logicalChannel (ome.model.core.LogicalChannel)
- getLogs() - Method in class ome.model.meta.Event
-
returns logs .
- getLongValue() - Method in class ome.model.annotations.LongAnnotation
-
Simple field ome.model.annotations.LongAnnotation.longValue (java.lang.Long)
- getLookupTable() - Method in class ome.model.core.Channel
-
Simple field ome.model.core.Channel.lookupTable (java.lang.String)
- getLookupTable() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.lookupTable (java.lang.String)
- getLotNumber() - Method in class ome.model.acquisition.Detector
-
Simple field ome.model.acquisition.Detector.lotNumber (java.lang.String)
- getLotNumber() - Method in class ome.model.acquisition.Dichroic
-
Simple field ome.model.acquisition.Dichroic.lotNumber (java.lang.String)
- getLotNumber() - Method in class ome.model.acquisition.Filter
-
Simple field ome.model.acquisition.Filter.lotNumber (java.lang.String)
- getLotNumber() - Method in class ome.model.acquisition.FilterSet
-
Simple field ome.model.acquisition.FilterSet.lotNumber (java.lang.String)
- getLotNumber() - Method in class ome.model.acquisition.LightSource
-
Simple field ome.model.acquisition.LightSource.lotNumber (java.lang.String)
- getLotNumber() - Method in class ome.model.acquisition.Microscope
-
Simple field ome.model.acquisition.Microscope.lotNumber (java.lang.String)
- getLotNumber() - Method in class ome.model.acquisition.Objective
-
Simple field ome.model.acquisition.Objective.lotNumber (java.lang.String)
- getLowerLimit() - Method in class ome.model.display.PlaneSlicingContext
-
Simple field ome.model.display.PlaneSlicingContext.lowerLimit (java.lang.Integer)
- getLsid() - Method in class ome.model.meta.ExternalInfo
-
Simple field ome.model.meta.ExternalInfo.lsid (java.lang.String)
- getManufacturer() - Method in class ome.model.acquisition.Detector
-
Simple field ome.model.acquisition.Detector.manufacturer (java.lang.String)
- getManufacturer() - Method in class ome.model.acquisition.Dichroic
-
Simple field ome.model.acquisition.Dichroic.manufacturer (java.lang.String)
- getManufacturer() - Method in class ome.model.acquisition.Filter
-
Simple field ome.model.acquisition.Filter.manufacturer (java.lang.String)
- getManufacturer() - Method in class ome.model.acquisition.FilterSet
-
Simple field ome.model.acquisition.FilterSet.manufacturer (java.lang.String)
- getManufacturer() - Method in class ome.model.acquisition.LightSource
-
Simple field ome.model.acquisition.LightSource.manufacturer (java.lang.String)
- getManufacturer() - Method in class ome.model.acquisition.Microscope
-
Simple field ome.model.acquisition.Microscope.manufacturer (java.lang.String)
- getManufacturer() - Method in class ome.model.acquisition.Objective
-
Simple field ome.model.acquisition.Objective.manufacturer (java.lang.String)
- getMap() - Method in class ome.model.acquisition.GenericExcitationSource
-
- getMap() - Method in class ome.model.acquisition.ImagingEnvironment
-
- getMapValue() - Method in class ome.model.annotations.MapAnnotation
-
- getMarkerEnd() - Method in class ome.model.roi.Line
-
Simple field ome.model.roi.Line.markerEnd (java.lang.String)
- getMarkerEnd() - Method in class ome.model.roi.Polyline
-
Simple field ome.model.roi.Polyline.markerEnd (java.lang.String)
- getMarkerStart() - Method in class ome.model.roi.Line
-
Simple field ome.model.roi.Line.markerStart (java.lang.String)
- getMarkerStart() - Method in class ome.model.roi.Polyline
-
Simple field ome.model.roi.Polyline.markerStart (java.lang.String)
- getMaximum() - Method in class ome.util.PixelData
-
Returns the minimum pixel value this pixel data supports.
- getMaximumFieldCount() - Method in class ome.model.screen.PlateAcquisition
-
Simple field ome.model.screen.PlateAcquisition.maximumFieldCount (java.lang.Integer)
- getMedium() - Method in class ome.model.acquisition.ObjectiveSettings
-
Many-to-one field ome.model.acquisition.ObjectiveSettings.medium (ome.model.enums.Medium)
- getMessage() - Method in exception ome.conditions.acl.ACLViolation
-
- getMessage() - Method in exception ome.conditions.acl.CollectedACLViolations
-
- getMessage() - Method in class ome.model.jobs.Job
-
Simple field ome.model.jobs.Job.message (java.lang.String)
- getMessage() - Method in class ome.model.meta.DBPatch
-
Simple field ome.model.meta.DBPatch.message (java.lang.String)
- getMessage() - Method in class ome.model.meta.Session
-
Simple field ome.model.meta.Session.message (java.lang.String)
- getMethodology() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.methodology (java.lang.String)
- getMicrobeamManipulation() - Method in class ome.model.acquisition.LightSettings
-
Many-to-one field ome.model.acquisition.LightSettings.microbeamManipulation (ome.model.experiment.MicrobeamManipulation)
- getMicrobeamManipulation() - Method in class ome.model.experiment.Experiment
-
returns microbeamManipulation .
- getMicroscope() - Method in class ome.model.acquisition.Instrument
-
Many-to-one field ome.model.acquisition.Instrument.microscope (ome.model.acquisition.Microscope)
- getMiddleName() - Method in class ome.model.meta.Experimenter
-
Simple field ome.model.meta.Experimenter.middleName (java.lang.String)
- getMimetype() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.mimetype (java.lang.String)
- getMimeType() - Method in class ome.model.display.Thumbnail
-
Simple field ome.model.display.Thumbnail.mimeType (java.lang.String)
- getMinimum() - Method in class ome.util.PixelData
-
Returns the minimum pixel value this pixel data supports.
- getMode() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.mode (ome.model.enums.AcquisitionMode)
- getModel() - Method in class ome.model.acquisition.Detector
-
Simple field ome.model.acquisition.Detector.model (java.lang.String)
- getModel() - Method in class ome.model.acquisition.Dichroic
-
Simple field ome.model.acquisition.Dichroic.model (java.lang.String)
- getModel() - Method in class ome.model.acquisition.Filter
-
Simple field ome.model.acquisition.Filter.model (java.lang.String)
- getModel() - Method in class ome.model.acquisition.FilterSet
-
Simple field ome.model.acquisition.FilterSet.model (java.lang.String)
- getModel() - Method in class ome.model.acquisition.LightSource
-
Simple field ome.model.acquisition.LightSource.model (java.lang.String)
- getModel() - Method in class ome.model.acquisition.Microscope
-
Simple field ome.model.acquisition.Microscope.model (java.lang.String)
- getModel() - Method in class ome.model.acquisition.Objective
-
Simple field ome.model.acquisition.Objective.model (java.lang.String)
- getModel() - Method in class ome.model.display.RenderingDef
-
Many-to-one field ome.model.display.RenderingDef.model (ome.model.enums.RenderingModel)
- getMtime() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.mtime (java.sql.Timestamp)
- getMultivalued() - Method in class ome.model.meta.Namespace
-
Simple field ome.model.meta.Namespace.multivalued (java.lang.Boolean)
- getName() - Method in class ome.model.acquisition.StageLabel
-
Simple field ome.model.acquisition.StageLabel.name (java.lang.String)
- getName() - Method in class ome.model.annotations.Annotation
-
Simple field ome.model.annotations.Annotation.name (java.lang.String)
- getName() - Method in class ome.model.containers.Dataset
-
Simple field ome.model.containers.Dataset.name (java.lang.String)
- getName() - Method in class ome.model.containers.Folder
-
Simple field ome.model.containers.Folder.name (java.lang.String)
- getName() - Method in class ome.model.containers.Project
-
Simple field ome.model.containers.Project.name (java.lang.String)
- getName() - Method in class ome.model.core.Image
-
Simple field ome.model.core.Image.name (java.lang.String)
- getName() - Method in class ome.model.core.LogicalChannel
-
Simple field ome.model.core.LogicalChannel.name (java.lang.String)
- getName() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.name (java.lang.String)
- getName() - Method in class ome.model.display.RenderingDef
-
Simple field ome.model.display.RenderingDef.name (java.lang.String)
- getName() - Method in class ome.model.internal.NamedValue
-
- getName() - Method in class ome.model.meta.ExperimenterGroup
-
Simple field ome.model.meta.ExperimenterGroup.name (java.lang.String)
- getName() - Method in class ome.model.meta.Namespace
-
Simple field ome.model.meta.Namespace.name (java.lang.String)
- getName() - Method in class ome.model.roi.Roi
-
Simple field ome.model.roi.Roi.name (java.lang.String)
- getName() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.name (java.lang.String)
- getName() - Method in class ome.model.screen.PlateAcquisition
-
Simple field ome.model.screen.PlateAcquisition.name (java.lang.String)
- getName() - Method in class ome.model.screen.Reagent
-
Simple field ome.model.screen.Reagent.name (java.lang.String)
- getName() - Method in class ome.model.screen.Screen
-
Simple field ome.model.screen.Screen.name (java.lang.String)
- getName() - Method in class ome.util.PrivilegedStringType
-
- getNdFilter() - Method in class ome.model.core.LogicalChannel
-
Simple field ome.model.core.LogicalChannel.ndFilter (java.lang.Double)
- getNode() - Method in class ome.model.meta.Session
-
Many-to-one field ome.model.meta.Session.node (ome.model.meta.Node)
- getNoiseReduction() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.noiseReduction (java.lang.Boolean)
- getNominalMagnification() - Method in class ome.model.acquisition.Objective
-
Simple field ome.model.acquisition.Objective.nominalMagnification (java.lang.Double)
- getNs() - Method in class ome.model.annotations.Annotation
-
Simple field ome.model.annotations.Annotation.ns (java.lang.String)
- getObjective() - Method in class ome.model.acquisition.Instrument
-
returns objective .
- getObjective() - Method in class ome.model.acquisition.ObjectiveSettings
-
Many-to-one field ome.model.acquisition.ObjectiveSettings.objective (ome.model.acquisition.Objective)
- getObjective() - Method in class ome.model.acquisition.OTF
-
Many-to-one field ome.model.acquisition.OTF.objective (ome.model.acquisition.Objective)
- getObjectiveSettings() - Method in class ome.model.core.Image
-
Many-to-one field ome.model.core.Image.objectiveSettings (ome.model.acquisition.ObjectiveSettings)
- getObjectVoidMethods(Class<T>) - Static method in class ome.util.Utils
-
primarily used in Grinder to discover what methods to call
- getOffset() - Method in class ome.parameters.Parameters
-
- getOffsetValue() - Method in class ome.model.acquisition.Detector
-
Simple field ome.model.acquisition.Detector.offsetValue (java.lang.Double)
- getOffsetValue() - Method in class ome.model.acquisition.DetectorSettings
-
Simple field ome.model.acquisition.DetectorSettings.offsetValue (java.lang.Double)
- getOmeName() - Method in class ome.model.meta.Experimenter
-
Simple field ome.model.meta.Experimenter.omeName (java.lang.String)
- getOpticalAxisAveraged() - Method in class ome.model.acquisition.OTF
-
Simple field ome.model.acquisition.OTF.opticalAxisAveraged (java.lang.Boolean)
- getOrder() - Method in class ome.util.PixelData
-
Returns the byte order of the backing buffer.
- getOriginalFile() - Method in class ome.model.fs.FilesetEntry
-
Many-to-one field ome.model.fs.FilesetEntry.originalFile (ome.model.core.OriginalFile)
- getOriginalFileLinks() - Method in class ome.model.jobs.Job
-
returns originalFileLinks .
- getOriginalFileLinksCountPerOwner() - Method in class ome.model.jobs.Job
-
If fetched, returns the count(*) of ome.model.jobs.JobOriginalFileLink that a user has.
- getOtf() - Method in class ome.model.acquisition.Instrument
-
returns otf .
- getOtf() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.otf (ome.model.acquisition.OTF)
- getOwner() - Method in class ome.model.acquisition.Detector.Details
-
- getOwner() - Method in class ome.model.acquisition.DetectorSettings.Details
-
- getOwner() - Method in class ome.model.acquisition.Dichroic.Details
-
- getOwner() - Method in class ome.model.acquisition.Filter.Details
-
- getOwner() - Method in class ome.model.acquisition.FilterSet.Details
-
- getOwner() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink.Details
-
- getOwner() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink.Details
-
- getOwner() - Method in class ome.model.acquisition.ImagingEnvironment.Details
-
- getOwner() - Method in class ome.model.acquisition.Instrument.Details
-
- getOwner() - Method in class ome.model.acquisition.LightPath.Details
-
- getOwner() - Method in class ome.model.acquisition.LightPathEmissionFilterLink.Details
-
- getOwner() - Method in class ome.model.acquisition.LightPathExcitationFilterLink.Details
-
- getOwner() - Method in class ome.model.acquisition.LightSettings.Details
-
- getOwner() - Method in class ome.model.acquisition.LightSource.Details
-
- getOwner() - Method in class ome.model.acquisition.Microscope.Details
-
- getOwner() - Method in class ome.model.acquisition.Objective.Details
-
- getOwner() - Method in class ome.model.acquisition.ObjectiveSettings.Details
-
- getOwner() - Method in class ome.model.acquisition.OTF.Details
-
- getOwner() - Method in class ome.model.acquisition.StageLabel.Details
-
- getOwner() - Method in class ome.model.acquisition.TransmittanceRange.Details
-
- getOwner() - Method in class ome.model.annotations.Annotation.Details
-
- getOwner() - Method in class ome.model.annotations.AnnotationAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ChannelAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.DatasetAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.DetectorAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.DichroicAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ExperimenterAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.FilesetAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.FilterAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.FolderAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ImageAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.InstrumentAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.LightPathAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.LightSourceAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.NamespaceAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.NodeAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ObjectiveAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.OriginalFileAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.PlaneInfoAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.PlateAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ProjectAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ReagentAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.RoiAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ScreenAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.SessionAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.ShapeAnnotationLink.Details
-
- getOwner() - Method in class ome.model.annotations.WellAnnotationLink.Details
-
- getOwner() - Method in class ome.model.containers.Dataset.Details
-
- getOwner() - Method in class ome.model.containers.DatasetImageLink.Details
-
- getOwner() - Method in class ome.model.containers.Folder.Details
-
- getOwner() - Method in class ome.model.containers.FolderImageLink.Details
-
- getOwner() - Method in class ome.model.containers.FolderRoiLink.Details
-
- getOwner() - Method in class ome.model.containers.Project.Details
-
- getOwner() - Method in class ome.model.containers.ProjectDatasetLink.Details
-
- getOwner() - Method in class ome.model.core.Channel.Details
-
- getOwner() - Method in class ome.model.core.Image.Details
-
- getOwner() - Method in class ome.model.core.LogicalChannel.Details
-
- getOwner() - Method in class ome.model.core.OriginalFile.Details
-
- getOwner() - Method in class ome.model.core.Pixels.Details
-
- getOwner() - Method in class ome.model.core.PixelsOriginalFileMap.Details
-
- getOwner() - Method in class ome.model.core.PlaneInfo.Details
-
- getOwner() - Method in class ome.model.display.ChannelBinding.Details
-
- getOwner() - Method in class ome.model.display.CodomainMapContext.Details
-
- getOwner() - Method in class ome.model.display.ProjectionDef.Details
-
- getOwner() - Method in class ome.model.display.QuantumDef.Details
-
- getOwner() - Method in class ome.model.display.RenderingDef.Details
-
- getOwner() - Method in class ome.model.display.Thumbnail.Details
-
- getOwner() - Method in class ome.model.experiment.Experiment.Details
-
- getOwner() - Method in class ome.model.experiment.MicrobeamManipulation.Details
-
- getOwner() - Method in class ome.model.fs.Fileset.Details
-
- getOwner() - Method in class ome.model.fs.FilesetEntry.Details
-
- getOwner() - Method in class ome.model.fs.FilesetJobLink.Details
-
- getOwner() - Method in interface ome.model.IDetails
-
- getOwner() - Method in class ome.model.internal.Details
-
- getOwner() - Method in class ome.model.internal.Link.Details
-
- getOwner() - Method in class ome.model.jobs.Job.Details
-
- getOwner() - Method in class ome.model.jobs.JobOriginalFileLink.Details
-
- getOwner() - Method in class ome.model.meta.ExternalInfo.Details
-
- getOwner() - Method in class ome.model.meta.GroupExperimenterMap
-
Simple field ome.model.meta.GroupExperimenterMap.owner (java.lang.Boolean)
- getOwner() - Method in class ome.model.meta.Session
-
Many-to-one field ome.model.meta.Session.owner (ome.model.meta.Experimenter)
- getOwner() - Method in class ome.model.roi.AffineTransform.Details
-
- getOwner() - Method in class ome.model.roi.Roi.Details
-
- getOwner() - Method in class ome.model.roi.Shape.Details
-
- getOwner() - Method in class ome.model.screen.Plate.Details
-
- getOwner() - Method in class ome.model.screen.PlateAcquisition.Details
-
- getOwner() - Method in class ome.model.screen.Reagent.Details
-
- getOwner() - Method in class ome.model.screen.Screen.Details
-
- getOwner() - Method in class ome.model.screen.ScreenPlateLink.Details
-
- getOwner() - Method in class ome.model.screen.Well.Details
-
- getOwner() - Method in class ome.model.screen.WellReagentLink.Details
-
- getOwner() - Method in class ome.model.screen.WellSample.Details
-
- getOwner() - Method in class ome.model.stats.StatsInfo.Details
-
- getParams() - Method in class ome.model.jobs.ParseJob
-
Simple field ome.model.jobs.ParseJob.params (byte[])
- getParent() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink
-
Many-to-one field ome.model.acquisition.FilterSetEmissionFilterLink.parent (ome.model.acquisition.FilterSet)
- getParent() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink
-
Many-to-one field ome.model.acquisition.FilterSetExcitationFilterLink.parent (ome.model.acquisition.FilterSet)
- getParent() - Method in class ome.model.acquisition.LightPathEmissionFilterLink
-
Many-to-one field ome.model.acquisition.LightPathEmissionFilterLink.parent (ome.model.acquisition.LightPath)
- getParent() - Method in class ome.model.acquisition.LightPathExcitationFilterLink
-
Many-to-one field ome.model.acquisition.LightPathExcitationFilterLink.parent (ome.model.acquisition.LightPath)
- getParent() - Method in class ome.model.annotations.AnnotationAnnotationLink
-
Many-to-one field ome.model.annotations.AnnotationAnnotationLink.parent (ome.model.annotations.Annotation)
- getParent() - Method in class ome.model.annotations.ChannelAnnotationLink
-
Many-to-one field ome.model.annotations.ChannelAnnotationLink.parent (ome.model.core.Channel)
- getParent() - Method in class ome.model.annotations.DatasetAnnotationLink
-
Many-to-one field ome.model.annotations.DatasetAnnotationLink.parent (ome.model.containers.Dataset)
- getParent() - Method in class ome.model.annotations.DetectorAnnotationLink
-
Many-to-one field ome.model.annotations.DetectorAnnotationLink.parent (ome.model.acquisition.Detector)
- getParent() - Method in class ome.model.annotations.DichroicAnnotationLink
-
Many-to-one field ome.model.annotations.DichroicAnnotationLink.parent (ome.model.acquisition.Dichroic)
- getParent() - Method in class ome.model.annotations.ExperimenterAnnotationLink
-
Many-to-one field ome.model.annotations.ExperimenterAnnotationLink.parent (ome.model.meta.Experimenter)
- getParent() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink
-
Many-to-one field ome.model.annotations.ExperimenterGroupAnnotationLink.parent (ome.model.meta.ExperimenterGroup)
- getParent() - Method in class ome.model.annotations.FilesetAnnotationLink
-
Many-to-one field ome.model.annotations.FilesetAnnotationLink.parent (ome.model.fs.Fileset)
- getParent() - Method in class ome.model.annotations.FilterAnnotationLink
-
Many-to-one field ome.model.annotations.FilterAnnotationLink.parent (ome.model.acquisition.Filter)
- getParent() - Method in class ome.model.annotations.FolderAnnotationLink
-
Many-to-one field ome.model.annotations.FolderAnnotationLink.parent (ome.model.containers.Folder)
- getParent() - Method in class ome.model.annotations.ImageAnnotationLink
-
Many-to-one field ome.model.annotations.ImageAnnotationLink.parent (ome.model.core.Image)
- getParent() - Method in class ome.model.annotations.InstrumentAnnotationLink
-
Many-to-one field ome.model.annotations.InstrumentAnnotationLink.parent (ome.model.acquisition.Instrument)
- getParent() - Method in class ome.model.annotations.LightPathAnnotationLink
-
Many-to-one field ome.model.annotations.LightPathAnnotationLink.parent (ome.model.acquisition.LightPath)
- getParent() - Method in class ome.model.annotations.LightSourceAnnotationLink
-
Many-to-one field ome.model.annotations.LightSourceAnnotationLink.parent (ome.model.acquisition.LightSource)
- getParent() - Method in class ome.model.annotations.NamespaceAnnotationLink
-
Many-to-one field ome.model.annotations.NamespaceAnnotationLink.parent (ome.model.meta.Namespace)
- getParent() - Method in class ome.model.annotations.NodeAnnotationLink
-
Many-to-one field ome.model.annotations.NodeAnnotationLink.parent (ome.model.meta.Node)
- getParent() - Method in class ome.model.annotations.ObjectiveAnnotationLink
-
Many-to-one field ome.model.annotations.ObjectiveAnnotationLink.parent (ome.model.acquisition.Objective)
- getParent() - Method in class ome.model.annotations.OriginalFileAnnotationLink
-
Many-to-one field ome.model.annotations.OriginalFileAnnotationLink.parent (ome.model.core.OriginalFile)
- getParent() - Method in class ome.model.annotations.PlaneInfoAnnotationLink
-
Many-to-one field ome.model.annotations.PlaneInfoAnnotationLink.parent (ome.model.core.PlaneInfo)
- getParent() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink
-
Many-to-one field ome.model.annotations.PlateAcquisitionAnnotationLink.parent (ome.model.screen.PlateAcquisition)
- getParent() - Method in class ome.model.annotations.PlateAnnotationLink
-
Many-to-one field ome.model.annotations.PlateAnnotationLink.parent (ome.model.screen.Plate)
- getParent() - Method in class ome.model.annotations.ProjectAnnotationLink
-
Many-to-one field ome.model.annotations.ProjectAnnotationLink.parent (ome.model.containers.Project)
- getParent() - Method in class ome.model.annotations.ReagentAnnotationLink
-
Many-to-one field ome.model.annotations.ReagentAnnotationLink.parent (ome.model.screen.Reagent)
- getParent() - Method in class ome.model.annotations.RoiAnnotationLink
-
Many-to-one field ome.model.annotations.RoiAnnotationLink.parent (ome.model.roi.Roi)
- getParent() - Method in class ome.model.annotations.ScreenAnnotationLink
-
Many-to-one field ome.model.annotations.ScreenAnnotationLink.parent (ome.model.screen.Screen)
- getParent() - Method in class ome.model.annotations.SessionAnnotationLink
-
Many-to-one field ome.model.annotations.SessionAnnotationLink.parent (ome.model.meta.Session)
- getParent() - Method in class ome.model.annotations.ShapeAnnotationLink
-
Many-to-one field ome.model.annotations.ShapeAnnotationLink.parent (ome.model.roi.Shape)
- getParent() - Method in class ome.model.annotations.WellAnnotationLink
-
Many-to-one field ome.model.annotations.WellAnnotationLink.parent (ome.model.screen.Well)
- getParent() - Method in class ome.model.containers.DatasetImageLink
-
Many-to-one field ome.model.containers.DatasetImageLink.parent (ome.model.containers.Dataset)
- getParent() - Method in class ome.model.containers.FolderImageLink
-
Many-to-one field ome.model.containers.FolderImageLink.parent (ome.model.containers.Folder)
- getParent() - Method in class ome.model.containers.FolderRoiLink
-
Many-to-one field ome.model.containers.FolderRoiLink.parent (ome.model.containers.Folder)
- getParent() - Method in class ome.model.containers.ProjectDatasetLink
-
Many-to-one field ome.model.containers.ProjectDatasetLink.parent (ome.model.containers.Project)
- getParent() - Method in class ome.model.core.PixelsOriginalFileMap
-
Many-to-one field ome.model.core.PixelsOriginalFileMap.parent (ome.model.core.OriginalFile)
- getParent() - Method in class ome.model.fs.FilesetJobLink
-
Many-to-one field ome.model.fs.FilesetJobLink.parent (ome.model.fs.Fileset)
- getParent() - Method in interface ome.model.ILink
-
- getParent() - Method in class ome.model.jobs.JobOriginalFileLink
-
Many-to-one field ome.model.jobs.JobOriginalFileLink.parent (ome.model.jobs.Job)
- getParent() - Method in class ome.model.meta.GroupExperimenterMap
-
Many-to-one field ome.model.meta.GroupExperimenterMap.parent (ome.model.meta.ExperimenterGroup)
- getParent() - Method in class ome.model.meta.ShareMember
-
Many-to-one field ome.model.meta.ShareMember.parent (ome.model.meta.Share)
- getParent() - Method in class ome.model.screen.ScreenPlateLink
-
Many-to-one field ome.model.screen.ScreenPlateLink.parent (ome.model.screen.Screen)
- getParent() - Method in class ome.model.screen.WellReagentLink
-
Many-to-one field ome.model.screen.WellReagentLink.parent (ome.model.screen.Well)
- getParentFolder() - Method in class ome.model.containers.Folder
-
Many-to-one field ome.model.containers.Folder.parentFolder (ome.model.containers.Folder)
- getPartial() - Method in class ome.model.core.Image
-
Simple field ome.model.core.Image.partial (java.lang.Boolean)
- getPasswordHash(Long) - Method in interface ome.util.SqlAction
-
- getPasswordHash(Long) - Method in class ome.util.SqlAction.Impl
-
- getPath() - Method in class ome.model.acquisition.OTF
-
Simple field ome.model.acquisition.OTF.path (java.lang.String)
- getPath() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.path (java.lang.String)
- getPerm1() - Method in class ome.model.internal.Permissions
-
- getPermissions() - Method in class ome.model.acquisition.Detector.Details
-
- getPermissions() - Method in class ome.model.acquisition.DetectorSettings.Details
-
- getPermissions() - Method in class ome.model.acquisition.Dichroic.Details
-
- getPermissions() - Method in class ome.model.acquisition.Filter.Details
-
- getPermissions() - Method in class ome.model.acquisition.FilterSet.Details
-
- getPermissions() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink.Details
-
- getPermissions() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink.Details
-
- getPermissions() - Method in class ome.model.acquisition.ImagingEnvironment.Details
-
- getPermissions() - Method in class ome.model.acquisition.Instrument.Details
-
- getPermissions() - Method in class ome.model.acquisition.LightPath.Details
-
- getPermissions() - Method in class ome.model.acquisition.LightPathEmissionFilterLink.Details
-
- getPermissions() - Method in class ome.model.acquisition.LightPathExcitationFilterLink.Details
-
- getPermissions() - Method in class ome.model.acquisition.LightSettings.Details
-
- getPermissions() - Method in class ome.model.acquisition.LightSource.Details
-
- getPermissions() - Method in class ome.model.acquisition.Microscope.Details
-
- getPermissions() - Method in class ome.model.acquisition.Objective.Details
-
- getPermissions() - Method in class ome.model.acquisition.ObjectiveSettings.Details
-
- getPermissions() - Method in class ome.model.acquisition.OTF.Details
-
- getPermissions() - Method in class ome.model.acquisition.StageLabel.Details
-
- getPermissions() - Method in class ome.model.acquisition.TransmittanceRange.Details
-
- getPermissions() - Method in class ome.model.annotations.Annotation.Details
-
- getPermissions() - Method in class ome.model.annotations.AnnotationAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ChannelAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.DatasetAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.DetectorAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.DichroicAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ExperimenterAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.FilesetAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.FilterAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.FolderAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ImageAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.InstrumentAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.LightPathAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.LightSourceAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.NamespaceAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.NodeAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ObjectiveAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.OriginalFileAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.PlaneInfoAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.PlateAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ProjectAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ReagentAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.RoiAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ScreenAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.SessionAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.ShapeAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.annotations.WellAnnotationLink.Details
-
- getPermissions() - Method in class ome.model.containers.Dataset.Details
-
- getPermissions() - Method in class ome.model.containers.DatasetImageLink.Details
-
- getPermissions() - Method in class ome.model.containers.Folder.Details
-
- getPermissions() - Method in class ome.model.containers.FolderImageLink.Details
-
- getPermissions() - Method in class ome.model.containers.FolderRoiLink.Details
-
- getPermissions() - Method in class ome.model.containers.Project.Details
-
- getPermissions() - Method in class ome.model.containers.ProjectDatasetLink.Details
-
- getPermissions() - Method in class ome.model.core.Channel.Details
-
- getPermissions() - Method in class ome.model.core.Image.Details
-
- getPermissions() - Method in class ome.model.core.LogicalChannel.Details
-
- getPermissions() - Method in class ome.model.core.OriginalFile.Details
-
- getPermissions() - Method in class ome.model.core.Pixels.Details
-
- getPermissions() - Method in class ome.model.core.PixelsOriginalFileMap.Details
-
- getPermissions() - Method in class ome.model.core.PlaneInfo.Details
-
- getPermissions() - Method in class ome.model.display.ChannelBinding.Details
-
- getPermissions() - Method in class ome.model.display.CodomainMapContext.Details
-
- getPermissions() - Method in class ome.model.display.ProjectionDef.Details
-
- getPermissions() - Method in class ome.model.display.QuantumDef.Details
-
- getPermissions() - Method in class ome.model.display.RenderingDef.Details
-
- getPermissions() - Method in class ome.model.display.Thumbnail.Details
-
- getPermissions() - Method in class ome.model.enums.AcquisitionMode.Details
-
- getPermissions() - Method in class ome.model.enums.AdminPrivilege.Details
-
- getPermissions() - Method in class ome.model.enums.ArcType.Details
-
- getPermissions() - Method in class ome.model.enums.Binning.Details
-
- getPermissions() - Method in class ome.model.enums.ChecksumAlgorithm.Details
-
- getPermissions() - Method in class ome.model.enums.ContrastMethod.Details
-
- getPermissions() - Method in class ome.model.enums.Correction.Details
-
- getPermissions() - Method in class ome.model.enums.DetectorType.Details
-
- getPermissions() - Method in class ome.model.enums.DimensionOrder.Details
-
- getPermissions() - Method in class ome.model.enums.EventType.Details
-
- getPermissions() - Method in class ome.model.enums.ExperimentType.Details
-
- getPermissions() - Method in class ome.model.enums.Family.Details
-
- getPermissions() - Method in class ome.model.enums.FilamentType.Details
-
- getPermissions() - Method in class ome.model.enums.FilterType.Details
-
- getPermissions() - Method in class ome.model.enums.Format.Details
-
- getPermissions() - Method in class ome.model.enums.Illumination.Details
-
- getPermissions() - Method in class ome.model.enums.Immersion.Details
-
- getPermissions() - Method in class ome.model.enums.LaserMedium.Details
-
- getPermissions() - Method in class ome.model.enums.LaserType.Details
-
- getPermissions() - Method in class ome.model.enums.Medium.Details
-
- getPermissions() - Method in class ome.model.enums.MicrobeamManipulationType.Details
-
- getPermissions() - Method in class ome.model.enums.MicroscopeType.Details
-
- getPermissions() - Method in class ome.model.enums.PhotometricInterpretation.Details
-
- getPermissions() - Method in class ome.model.enums.PixelsType.Details
-
- getPermissions() - Method in class ome.model.enums.ProjectionAxis.Details
-
- getPermissions() - Method in class ome.model.enums.ProjectionType.Details
-
- getPermissions() - Method in class ome.model.enums.Pulse.Details
-
- getPermissions() - Method in class ome.model.enums.RenderingModel.Details
-
- getPermissions() - Method in class ome.model.experiment.Experiment.Details
-
- getPermissions() - Method in class ome.model.experiment.MicrobeamManipulation.Details
-
- getPermissions() - Method in class ome.model.fs.Fileset.Details
-
- getPermissions() - Method in class ome.model.fs.FilesetEntry.Details
-
- getPermissions() - Method in class ome.model.fs.FilesetJobLink.Details
-
- getPermissions() - Method in interface ome.model.IDetails
-
- getPermissions() - Method in class ome.model.internal.Details
-
Permissions is a component embedded into the Details component.
- getPermissions() - Method in class ome.model.internal.Link.Details
-
- getPermissions() - Method in class ome.model.jobs.Job.Details
-
- getPermissions() - Method in class ome.model.jobs.JobOriginalFileLink.Details
-
- getPermissions() - Method in class ome.model.jobs.JobStatus.Details
-
- getPermissions() - Method in class ome.model.meta.DBPatch.Details
-
- getPermissions() - Method in class ome.model.meta.Event.Details
-
- getPermissions() - Method in class ome.model.meta.EventLog.Details
-
- getPermissions() - Method in class ome.model.meta.Experimenter.Details
-
- getPermissions() - Method in class ome.model.meta.ExperimenterGroup.Details
-
- getPermissions() - Method in class ome.model.meta.ExternalInfo.Details
-
- getPermissions() - Method in class ome.model.meta.GroupExperimenterMap.Details
-
- getPermissions() - Method in class ome.model.meta.Namespace.Details
-
- getPermissions() - Method in class ome.model.meta.Node.Details
-
- getPermissions() - Method in class ome.model.meta.Session.Details
-
- getPermissions() - Method in class ome.model.meta.ShareMember.Details
-
- getPermissions() - Method in class ome.model.roi.AffineTransform.Details
-
- getPermissions() - Method in class ome.model.roi.Roi.Details
-
- getPermissions() - Method in class ome.model.roi.Shape.Details
-
- getPermissions() - Method in class ome.model.screen.Plate.Details
-
- getPermissions() - Method in class ome.model.screen.PlateAcquisition.Details
-
- getPermissions() - Method in class ome.model.screen.Reagent.Details
-
- getPermissions() - Method in class ome.model.screen.Screen.Details
-
- getPermissions() - Method in class ome.model.screen.ScreenPlateLink.Details
-
- getPermissions() - Method in class ome.model.screen.Well.Details
-
- getPermissions() - Method in class ome.model.screen.WellReagentLink.Details
-
- getPermissions() - Method in class ome.model.screen.WellSample.Details
-
- getPermissions() - Method in class ome.model.stats.StatsInfo.Details
-
- getPhotometricInterpretation() - Method in class ome.model.core.LogicalChannel
-
Many-to-one field ome.model.core.LogicalChannel.photometricInterpretation (ome.model.enums.PhotometricInterpretation)
- getPhysicalSizeX() - Method in class ome.model.core.Pixels
-
Enum-mapped unit-based field ome.model.core.Pixels.physicalSizeX (ome.model.units.Length)
- getPhysicalSizeY() - Method in class ome.model.core.Pixels
-
Enum-mapped unit-based field ome.model.core.Pixels.physicalSizeY (ome.model.units.Length)
- getPhysicalSizeZ() - Method in class ome.model.core.Pixels
-
Enum-mapped unit-based field ome.model.core.Pixels.physicalSizeZ (ome.model.units.Length)
- getPinHoleSize() - Method in class ome.model.core.LogicalChannel
-
Enum-mapped unit-based field ome.model.core.LogicalChannel.pinHoleSize (ome.model.units.Length)
- getPixels() - Method in class ome.model.core.Channel
-
Many-to-one field ome.model.core.Channel.pixels (ome.model.core.Pixels)
- getPixels() - Method in class ome.model.core.Image
-
returns pixels .
- getPixels(int) - Method in class ome.model.core.Image
-
Gets the ome.model.core.Pixels at the given index.
- getPixels() - Method in class ome.model.core.PlaneInfo
-
Many-to-one field ome.model.core.PlaneInfo.pixels (ome.model.core.Pixels)
- getPixels() - Method in class ome.model.display.RenderingDef
-
Many-to-one field ome.model.display.RenderingDef.pixels (ome.model.core.Pixels)
- getPixels() - Method in class ome.model.display.Thumbnail
-
Many-to-one field ome.model.display.Thumbnail.pixels (ome.model.core.Pixels)
- getPixels() - Method in class ome.model.roi.Mask
-
Many-to-one field ome.model.roi.Mask.pixels (ome.model.core.Pixels)
- getPixelsFileMaps() - Method in class ome.model.core.OriginalFile
-
returns pixelsFileMaps .
- getPixelsFileMaps() - Method in class ome.model.core.Pixels
-
returns pixelsFileMaps .
- getPixelsFileMapsCountPerOwner() - Method in class ome.model.core.OriginalFile
-
If fetched, returns the count(*) of ome.model.core.PixelsOriginalFileMap that a user has.
- getPixelsFileMapsCountPerOwner() - Method in class ome.model.core.Pixels
-
If fetched, returns the count(*) of ome.model.core.PixelsOriginalFileMap that a user has.
- getPixelsId() - Method in exception ome.conditions.MissingPyramidException
-
- getPixelsNamePathRepo(long) - Method in class ome.util.actions.PostgresSqlAction
-
- getPixelsNamePathRepo(long) - Method in interface ome.util.SqlAction
-
Retrieves the name, path and repo for the given pixels set.
- getPixelsType() - Method in class ome.model.acquisition.OTF
-
Many-to-one field ome.model.acquisition.OTF.pixelsType (ome.model.enums.PixelsType)
- getPixelsType() - Method in class ome.model.core.Pixels
-
Many-to-one field ome.model.core.Pixels.pixelsType (ome.model.enums.PixelsType)
- getPixelValue(int) - Method in class ome.util.PixelData
-
Returns the pixel intensity value of the pixel at a given offset within
the backing buffer.
- getPixelValueDirect(int) - Method in class ome.util.PixelData
-
Returns the pixel intensity value of the pixel at a given offset within
the backing buffer.
- getPlaneInfo() - Method in class ome.model.core.Pixels
-
returns planeInfo .
- getPlanePrevious() - Method in class ome.model.display.PlaneSlicingContext
-
Simple field ome.model.display.PlaneSlicingContext.planePrevious (java.lang.Integer)
- getPlaneSelected() - Method in class ome.model.display.PlaneSlicingContext
-
Simple field ome.model.display.PlaneSlicingContext.planeSelected (java.lang.Integer)
- getPlate() - Method in class ome.model.screen.PlateAcquisition
-
Many-to-one field ome.model.screen.PlateAcquisition.plate (ome.model.screen.Plate)
- getPlate() - Method in class ome.model.screen.Well
-
Many-to-one field ome.model.screen.Well.plate (ome.model.screen.Plate)
- getPlateAcquisition() - Method in class ome.model.screen.WellSample
-
Many-to-one field ome.model.screen.WellSample.plateAcquisition (ome.model.screen.PlateAcquisition)
- getPlateAcquisitions() - Method in class ome.model.screen.Plate
-
returns plateAcquisitions .
- getPlateLinks() - Method in class ome.model.screen.Screen
-
returns plateLinks .
- getPlateLinksCountPerOwner() - Method in class ome.model.screen.Screen
-
If fetched, returns the count(*) of ome.model.screen.ScreenPlateLink that a user has.
- getPockelCell() - Method in class ome.model.acquisition.Laser
-
Simple field ome.model.acquisition.Laser.pockelCell (java.lang.Boolean)
- getPockelCellSetting() - Method in class ome.model.core.LogicalChannel
-
Simple field ome.model.core.LogicalChannel.pockelCellSetting (java.lang.Integer)
- getPoints() - Method in class ome.model.roi.Polygon
-
Simple field ome.model.roi.Polygon.points (java.lang.String)
- getPoints() - Method in class ome.model.roi.Polyline
-
Simple field ome.model.roi.Polyline.points (java.lang.String)
- getPositionX() - Method in class ome.model.acquisition.StageLabel
-
Enum-mapped unit-based field ome.model.acquisition.StageLabel.positionX (ome.model.units.Length)
- getPositionX() - Method in class ome.model.core.PlaneInfo
-
Enum-mapped unit-based field ome.model.core.PlaneInfo.positionX (ome.model.units.Length)
- getPositionY() - Method in class ome.model.acquisition.StageLabel
-
Enum-mapped unit-based field ome.model.acquisition.StageLabel.positionY (ome.model.units.Length)
- getPositionY() - Method in class ome.model.core.PlaneInfo
-
Enum-mapped unit-based field ome.model.core.PlaneInfo.positionY (ome.model.units.Length)
- getPositionZ() - Method in class ome.model.acquisition.StageLabel
-
Enum-mapped unit-based field ome.model.acquisition.StageLabel.positionZ (ome.model.units.Length)
- getPositionZ() - Method in class ome.model.core.PlaneInfo
-
Enum-mapped unit-based field ome.model.core.PlaneInfo.positionZ (ome.model.units.Length)
- getPosX() - Method in class ome.model.screen.WellSample
-
Enum-mapped unit-based field ome.model.screen.WellSample.posX (ome.model.units.Length)
- getPosY() - Method in class ome.model.screen.WellSample
-
Enum-mapped unit-based field ome.model.screen.WellSample.posY (ome.model.units.Length)
- getPower() - Method in class ome.model.acquisition.LightSource
-
Enum-mapped unit-based field ome.model.acquisition.LightSource.power (ome.model.units.Power)
- getPreviousPatch() - Method in class ome.model.meta.DBPatch
-
Simple field ome.model.meta.DBPatch.previousPatch (java.lang.Integer)
- getPreviousVersion() - Method in class ome.model.meta.DBPatch
-
Simple field ome.model.meta.DBPatch.previousVersion (java.lang.String)
- getPrimaryChannel() - Method in class ome.model.core.Pixels
-
Gets the first element of channels which can be interpreted as the
primary or default element in some situations.
- getPrimaryChannelBinding() - Method in class ome.model.display.RenderingDef
-
Gets the first element of waveRendering which can be interpreted as the
primary or default element in some situations.
- getPrimaryCodomainMapContext() - Method in class ome.model.display.ChannelBinding
-
Gets the first element of spatialDomainEnhancement which can be interpreted as the
primary or default element in some situations.
- getPrimaryFilesetEntry() - Method in class ome.model.fs.Fileset
-
Gets the first element of usedFiles which can be interpreted as the
primary or default element in some situations.
- getPrimaryFilesetJobLink() - Method in class ome.model.fs.Fileset
-
Gets the first element of jobLinks which can be interpreted as the
primary or default element in some situations.
- getPrimaryGroupExperimenterMap() - Method in class ome.model.meta.Experimenter
-
Gets the first element of groupExperimenterMap which can be interpreted as the
primary or default element in some situations.
- getPrimaryLightPathExcitationFilterLink() - Method in class ome.model.acquisition.LightPath
-
Gets the first element of excitationFilterLink which can be interpreted as the
primary or default element in some situations.
- getPrimaryPixels() - Method in class ome.model.core.Image
-
Gets the first element of pixels which can be interpreted as the
primary or default element in some situations.
- getPrimaryProjectionDef() - Method in class ome.model.display.RenderingDef
-
Gets the first element of projections which can be interpreted as the
primary or default element in some situations.
- getPrimaryShape() - Method in class ome.model.roi.Roi
-
Gets the first element of shapes which can be interpreted as the
primary or default element in some situations.
- getPrimaryWellSample() - Method in class ome.model.screen.Well
-
Gets the first element of wellSamples which can be interpreted as the
primary or default element in some situations.
- getProjectionDef(int) - Method in class ome.model.display.RenderingDef
-
Gets the ome.model.display.ProjectionDef at the given index.
- getProjections() - Method in class ome.model.display.RenderingDef
-
returns projections .
- getProjectLinks() - Method in class ome.model.containers.Dataset
-
returns projectLinks .
- getProjectLinksCountPerOwner() - Method in class ome.model.containers.Dataset
-
If fetched, returns the count(*) of ome.model.containers.ProjectDatasetLink that a user has.
- getProtocolDescription() - Method in class ome.model.screen.Screen
-
Simple field ome.model.screen.Screen.protocolDescription (java.lang.String)
- getProtocolIdentifier() - Method in class ome.model.screen.Screen
-
Simple field ome.model.screen.Screen.protocolIdentifier (java.lang.String)
- getPulse() - Method in class ome.model.acquisition.Laser
-
Many-to-one field ome.model.acquisition.Laser.pulse (ome.model.enums.Pulse)
- getPump() - Method in class ome.model.acquisition.Laser
-
Many-to-one field ome.model.acquisition.Laser.pump (ome.model.acquisition.LightSource)
- getQuantityClass() - Method in class ome.model.units.GenericEnumType
-
- getQuantization() - Method in class ome.model.display.RenderingDef
-
Many-to-one field ome.model.display.RenderingDef.quantization (ome.model.display.QuantumDef)
- getRadiusX() - Method in class ome.model.roi.Ellipse
-
Simple field ome.model.roi.Ellipse.radiusX (java.lang.Double)
- getRadiusY() - Method in class ome.model.roi.Ellipse
-
Simple field ome.model.roi.Ellipse.radiusY (java.lang.Double)
- getRdf() - Method in class ome.util.RdfPrinter
-
- getReadOutRate() - Method in class ome.model.acquisition.DetectorSettings
-
Enum-mapped unit-based field ome.model.acquisition.DetectorSettings.readOutRate (ome.model.units.Frequency)
- getReagentIdentifier() - Method in class ome.model.screen.Reagent
-
Simple field ome.model.screen.Reagent.reagentIdentifier (java.lang.String)
- getReagentLinks() - Method in class ome.model.screen.Well
-
returns reagentLinks .
- getReagentLinksCountPerOwner() - Method in class ome.model.screen.Well
-
If fetched, returns the count(*) of ome.model.screen.WellReagentLink that a user has.
- getReagents() - Method in class ome.model.screen.Screen
-
returns reagents .
- getReagentSetDescription() - Method in class ome.model.screen.Screen
-
Simple field ome.model.screen.Screen.reagentSetDescription (java.lang.String)
- getReagentSetIdentifier() - Method in class ome.model.screen.Screen
-
Simple field ome.model.screen.Screen.reagentSetIdentifier (java.lang.String)
- getRed() - Method in class ome.model.core.Channel
-
Simple field ome.model.core.Channel.red (java.lang.Integer)
- getRed() - Method in class ome.model.display.ChannelBinding
-
Simple field ome.model.display.ChannelBinding.red (java.lang.Integer)
- getRed() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.red (java.lang.Integer)
- getRef() - Method in class ome.model.display.Thumbnail
-
Simple field ome.model.display.Thumbnail.ref (java.lang.String)
- getRefractiveIndex() - Method in class ome.model.acquisition.ObjectiveSettings
-
Simple field ome.model.acquisition.ObjectiveSettings.refractiveIndex (java.lang.Double)
- getRelatedTo() - Method in class ome.model.core.Pixels
-
Deprecated.
- getRenderingDef() - Method in class ome.model.display.ChannelBinding
-
Many-to-one field ome.model.display.ChannelBinding.renderingDef (ome.model.display.RenderingDef)
- getRenderingDef() - Method in class ome.model.display.ProjectionDef
-
Many-to-one field ome.model.display.ProjectionDef.renderingDef (ome.model.display.RenderingDef)
- getRepetitionRate() - Method in class ome.model.acquisition.Laser
-
Enum-mapped unit-based field ome.model.acquisition.Laser.repetitionRate (ome.model.units.Frequency)
- getReplacement() - Method in class ome.model.internal.GraphHolder
-
a replacement is a managed entity instance which has the same
primary key as this instance.
- getRepo() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.repo (java.lang.String)
- getRestrictions() - Method in class ome.model.internal.Permissions
-
- getReverse() - Method in class ome.model.display.ReverseIntensityContext
-
Simple field ome.model.display.ReverseIntensityContext.reverse (java.lang.Boolean)
- getRoi() - Method in class ome.model.roi.Shape
-
Many-to-one field ome.model.roi.Shape.roi (ome.model.roi.Roi)
- getRoiLinks() - Method in class ome.model.containers.Folder
-
returns roiLinks .
- getRoiLinksCountPerOwner() - Method in class ome.model.containers.Folder
-
If fetched, returns the count(*) of ome.model.containers.FolderRoiLink that a user has.
- getRois() - Method in class ome.model.core.Image
-
returns rois .
- getRow() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.row (java.lang.Integer)
- getRowNamingConvention() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.rowNamingConvention (java.lang.String)
- getRows() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.rows (java.lang.Integer)
- getSamplesPerPixel() - Method in class ome.model.core.LogicalChannel
-
Simple field ome.model.core.LogicalChannel.samplesPerPixel (java.lang.Integer)
- getScale() - Method in class ome.model.meta.Node
-
Simple field ome.model.meta.Node.scale (java.lang.Integer)
- getScheduledFor() - Method in class ome.model.jobs.Job
-
Simple field ome.model.jobs.Job.scheduledFor (java.sql.Timestamp)
- getScreen() - Method in class ome.model.screen.Reagent
-
Many-to-one field ome.model.screen.Reagent.screen (ome.model.screen.Screen)
- getScreenLinks() - Method in class ome.model.screen.Plate
-
returns screenLinks .
- getScreenLinksCountPerOwner() - Method in class ome.model.screen.Plate
-
If fetched, returns the count(*) of ome.model.screen.ScreenPlateLink that a user has.
- getSerialNumber() - Method in class ome.model.acquisition.Detector
-
Simple field ome.model.acquisition.Detector.serialNumber (java.lang.String)
- getSerialNumber() - Method in class ome.model.acquisition.Dichroic
-
Simple field ome.model.acquisition.Dichroic.serialNumber (java.lang.String)
- getSerialNumber() - Method in class ome.model.acquisition.Filter
-
Simple field ome.model.acquisition.Filter.serialNumber (java.lang.String)
- getSerialNumber() - Method in class ome.model.acquisition.FilterSet
-
Simple field ome.model.acquisition.FilterSet.serialNumber (java.lang.String)
- getSerialNumber() - Method in class ome.model.acquisition.LightSource
-
Simple field ome.model.acquisition.LightSource.serialNumber (java.lang.String)
- getSerialNumber() - Method in class ome.model.acquisition.Microscope
-
Simple field ome.model.acquisition.Microscope.serialNumber (java.lang.String)
- getSerialNumber() - Method in class ome.model.acquisition.Objective
-
Simple field ome.model.acquisition.Objective.serialNumber (java.lang.String)
- getSeries() - Method in class ome.model.core.Image
-
Simple field ome.model.core.Image.series (java.lang.Integer)
- getSession() - Method in class ome.model.meta.Event
-
Many-to-one field ome.model.meta.Event.session (ome.model.meta.Session)
- getSessions() - Method in class ome.model.meta.Node
-
returns sessions .
- getSettings() - Method in class ome.model.core.Pixels
-
returns settings .
- getSha1() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.sha1 (java.lang.String)
- getShape(int) - Method in class ome.model.roi.Roi
-
Gets the ome.model.roi.Shape at the given index.
- getShapeIds(long) - Method in class ome.util.actions.PostgresSqlAction
-
- getShapeIds(long) - Method in interface ome.util.SqlAction
-
- getShapes() - Method in class ome.model.roi.Roi
-
returns shapes .
- getShareData(List<Long>) - Method in interface ome.util.SqlAction
-
Returns a map of Share ID to Share data blob.
- getShareData(List<Long>) - Method in class ome.util.SqlAction.Impl
-
- getSignificantBits() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.significantBits (java.lang.Integer)
- getSize() - Method in class ome.model.core.OriginalFile
-
Simple field ome.model.core.OriginalFile.size (java.lang.Long)
- getSizeC() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.sizeC (java.lang.Integer)
- getSizeT() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.sizeT (java.lang.Integer)
- getSizeX() - Method in class ome.model.acquisition.OTF
-
Simple field ome.model.acquisition.OTF.sizeX (java.lang.Integer)
- getSizeX() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.sizeX (java.lang.Integer)
- getSizeX() - Method in class ome.model.display.Thumbnail
-
Simple field ome.model.display.Thumbnail.sizeX (java.lang.Integer)
- getSizeY() - Method in class ome.model.acquisition.OTF
-
Simple field ome.model.acquisition.OTF.sizeY (java.lang.Integer)
- getSizeY() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.sizeY (java.lang.Integer)
- getSizeY() - Method in class ome.model.display.Thumbnail
-
Simple field ome.model.display.Thumbnail.sizeY (java.lang.Integer)
- getSizeZ() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.sizeZ (java.lang.Integer)
- getSource() - Method in class ome.model.roi.Roi
-
Many-to-one field ome.model.roi.Roi.source (ome.model.core.OriginalFile)
- getSpatialDomainEnhancement() - Method in class ome.model.display.ChannelBinding
-
returns spatialDomainEnhancement .
- getStageLabel() - Method in class ome.model.core.Image
-
Many-to-one field ome.model.core.Image.stageLabel (ome.model.acquisition.StageLabel)
- getStarted() - Method in class ome.model.jobs.Job
-
Simple field ome.model.jobs.Job.started (java.sql.Timestamp)
- getStarted() - Method in class ome.model.meta.Session
-
Simple field ome.model.meta.Session.started (java.sql.Timestamp)
- getStartPlane() - Method in class ome.model.display.ProjectionDef
-
Simple field ome.model.display.ProjectionDef.startPlane (java.lang.Integer)
- getStartTime() - Method in class ome.model.screen.PlateAcquisition
-
Simple field ome.model.screen.PlateAcquisition.startTime (java.sql.Timestamp)
- getStartTime() - Method in class ome.parameters.Parameters
-
- getStatsInfo() - Method in class ome.model.core.Channel
-
Many-to-one field ome.model.core.Channel.statsInfo (ome.model.stats.StatsInfo)
- getStatus() - Method in class ome.model.jobs.Job
-
Many-to-one field ome.model.jobs.Job.status (ome.model.jobs.JobStatus)
- getStatus() - Method in class ome.model.meta.Event
-
Simple field ome.model.meta.Event.status (java.lang.String)
- getStatus() - Method in class ome.model.screen.Plate
-
Simple field ome.model.screen.Plate.status (java.lang.String)
- getStatus() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.status (java.lang.String)
- getStepping() - Method in class ome.model.display.ProjectionDef
-
Simple field ome.model.display.ProjectionDef.stepping (java.lang.Integer)
- getString(String) - Static method in class ome.util.actions.PsqlStrings
-
- getStrokeColor() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.strokeColor (java.lang.Integer)
- getStrokeDashArray() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.strokeDashArray (java.lang.String)
- getStrokeWidth() - Method in class ome.model.roi.Shape
-
Enum-mapped unit-based field ome.model.roi.Shape.strokeWidth (ome.model.units.Length)
- getSubmitted() - Method in class ome.model.jobs.Job
-
Simple field ome.model.jobs.Job.submitted (java.sql.Timestamp)
- getSudoer() - Method in class ome.model.meta.Session
-
Many-to-one field ome.model.meta.Session.sudoer (ome.model.meta.Experimenter)
- getSymbol() - Method in enum ome.model.enums.UnitsElectricPotential
-
- getSymbol() - Method in enum ome.model.enums.UnitsFrequency
-
- getSymbol() - Method in enum ome.model.enums.UnitsLength
-
- getSymbol() - Method in enum ome.model.enums.UnitsPower
-
- getSymbol() - Method in enum ome.model.enums.UnitsPressure
-
- getSymbol() - Method in enum ome.model.enums.UnitsTemperature
-
- getSymbol() - Method in enum ome.model.enums.UnitsTime
-
- getSymbol() - Method in interface ome.model.units.UnitEnum
-
- getTemperature() - Method in class ome.model.acquisition.ImagingEnvironment
-
Enum-mapped unit-based field ome.model.acquisition.ImagingEnvironment.temperature (ome.model.units.Temperature)
- getTemplatePrefix() - Method in class ome.model.fs.Fileset
-
Simple field ome.model.fs.Fileset.templatePrefix (java.lang.String)
- getTermValue() - Method in class ome.model.annotations.TermAnnotation
-
Simple field ome.model.annotations.TermAnnotation.termValue (java.lang.String)
- getTextValue() - Method in class ome.model.annotations.TextAnnotation
-
Simple field ome.model.annotations.TextAnnotation.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Ellipse
-
Simple field ome.model.roi.Ellipse.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Label
-
Simple field ome.model.roi.Label.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Line
-
Simple field ome.model.roi.Line.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Mask
-
Simple field ome.model.roi.Mask.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Path
-
Deprecated.
Simple field ome.model.roi.Path.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Point
-
Simple field ome.model.roi.Point.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Polygon
-
Simple field ome.model.roi.Polygon.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Polyline
-
Simple field ome.model.roi.Polyline.textValue (java.lang.String)
- getTextValue() - Method in class ome.model.roi.Rectangle
-
Simple field ome.model.roi.Rectangle.textValue (java.lang.String)
- getTheC() - Method in class ome.model.core.PlaneInfo
-
Simple field ome.model.core.PlaneInfo.theC (java.lang.Integer)
- getTheC() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.theC (java.lang.Integer)
- getTheT() - Method in class ome.model.core.PlaneInfo
-
Simple field ome.model.core.PlaneInfo.theT (java.lang.Integer)
- getTheT() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.theT (java.lang.Integer)
- getTheZ() - Method in class ome.model.core.PlaneInfo
-
Simple field ome.model.core.PlaneInfo.theZ (java.lang.Integer)
- getTheZ() - Method in class ome.model.roi.Shape
-
Simple field ome.model.roi.Shape.theZ (java.lang.Integer)
- getThreadIdentifier() - Static method in class ome.util.Utils
-
Returns a String
which can be used to correlate log messages.
- getThumbnails() - Method in class ome.model.core.Pixels
-
returns thumbnails .
- getTime() - Method in class ome.model.meta.Event
-
Simple field ome.model.meta.Event.time (java.sql.Timestamp)
- getTimeIncrement() - Method in class ome.model.core.Pixels
-
Enum-mapped unit-based field ome.model.core.Pixels.timeIncrement (ome.model.units.Time)
- getTimepoint() - Method in class ome.model.screen.WellSample
-
Simple field ome.model.screen.WellSample.timepoint (java.sql.Timestamp)
- getTimeToIdle() - Method in class ome.model.meta.Session
-
Simple field ome.model.meta.Session.timeToIdle (java.lang.Long)
- getTimeToLive() - Method in class ome.model.meta.Session
-
Simple field ome.model.meta.Session.timeToLive (java.lang.Long)
- getTimeValue() - Method in class ome.model.annotations.TimestampAnnotation
-
Simple field ome.model.annotations.TimestampAnnotation.timeValue (java.sql.Timestamp)
- getTransform() - Method in class ome.model.roi.Shape
-
Many-to-one field ome.model.roi.Shape.transform (ome.model.roi.AffineTransform)
- getTransmittance() - Method in class ome.model.acquisition.TransmittanceRange
-
Simple field ome.model.acquisition.TransmittanceRange.transmittance (java.lang.Double)
- getTransmittanceRange() - Method in class ome.model.acquisition.Filter
-
Many-to-one field ome.model.acquisition.Filter.transmittanceRange (ome.model.acquisition.TransmittanceRange)
- getTuneable() - Method in class ome.model.acquisition.Laser
-
Simple field ome.model.acquisition.Laser.tuneable (java.lang.Boolean)
- getType() - Method in class ome.model.acquisition.Arc
-
Many-to-one field ome.model.acquisition.Arc.type (ome.model.enums.ArcType)
- getType() - Method in class ome.model.acquisition.Detector
-
Many-to-one field ome.model.acquisition.Detector.type (ome.model.enums.DetectorType)
- getType() - Method in class ome.model.acquisition.Filament
-
Many-to-one field ome.model.acquisition.Filament.type (ome.model.enums.FilamentType)
- getType() - Method in class ome.model.acquisition.Filter
-
Many-to-one field ome.model.acquisition.Filter.type (ome.model.enums.FilterType)
- getType() - Method in class ome.model.acquisition.Laser
-
Many-to-one field ome.model.acquisition.Laser.type (ome.model.enums.LaserType)
- getType() - Method in class ome.model.acquisition.Microscope
-
Many-to-one field ome.model.acquisition.Microscope.type (ome.model.enums.MicroscopeType)
- getType() - Method in class ome.model.display.ProjectionDef
-
Many-to-one field ome.model.display.ProjectionDef.type (ome.model.enums.ProjectionType)
- getType() - Method in class ome.model.experiment.Experiment
-
Many-to-one field ome.model.experiment.Experiment.type (ome.model.enums.ExperimentType)
- getType() - Method in class ome.model.experiment.MicrobeamManipulation
-
Many-to-one field ome.model.experiment.MicrobeamManipulation.type (ome.model.enums.MicrobeamManipulationType)
- getType() - Method in class ome.model.jobs.Job
-
Simple field ome.model.jobs.Job.type (java.lang.String)
- getType() - Method in class ome.model.meta.Event
-
Many-to-one field ome.model.meta.Event.type (ome.model.enums.EventType)
- getType() - Method in class ome.model.screen.Screen
-
Simple field ome.model.screen.Screen.type (java.lang.String)
- getType() - Method in class ome.model.screen.Well
-
Simple field ome.model.screen.Well.type (java.lang.String)
- getUnit() - Method in class ome.model.units.ElectricPotential
-
Many-to-one field ome.model.units.ElectricPotential.unit (ome.model.enums.UnitsElectricPotential).
- getUnit() - Method in class ome.model.units.Frequency
-
Many-to-one field ome.model.units.Frequency.unit (ome.model.enums.UnitsFrequency).
- getUnit() - Method in class ome.model.units.Length
-
Many-to-one field ome.model.units.Length.unit (ome.model.enums.UnitsLength).
- getUnit() - Method in class ome.model.units.Power
-
Many-to-one field ome.model.units.Power.unit (ome.model.enums.UnitsPower).
- getUnit() - Method in class ome.model.units.Pressure
-
Many-to-one field ome.model.units.Pressure.unit (ome.model.enums.UnitsPressure).
- getUnit() - Method in class ome.model.units.Temperature
-
Many-to-one field ome.model.units.Temperature.unit (ome.model.enums.UnitsTemperature).
- getUnit() - Method in class ome.model.units.Time
-
Many-to-one field ome.model.units.Time.unit (ome.model.enums.UnitsTime).
- getUnit() - Method in interface ome.model.units.Unit
-
- getUp() - Method in class ome.model.meta.Node
-
Simple field ome.model.meta.Node.up (java.sql.Timestamp)
- getUpdateEvent() - Method in class ome.model.acquisition.Detector.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.DetectorSettings.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.Dichroic.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.Filter.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.FilterSet.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.ImagingEnvironment.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.Instrument.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.LightPath.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.LightPathEmissionFilterLink.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.LightPathExcitationFilterLink.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.LightSettings.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.LightSource.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.Microscope.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.Objective.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.ObjectiveSettings.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.OTF.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.StageLabel.Details
-
- getUpdateEvent() - Method in class ome.model.acquisition.TransmittanceRange.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.Annotation.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.AnnotationAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ChannelAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.DatasetAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.DetectorAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.DichroicAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ExperimenterAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.FilesetAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.FilterAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.FolderAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ImageAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.InstrumentAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.LightPathAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.LightSourceAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.NamespaceAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.NodeAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ObjectiveAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.OriginalFileAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.PlaneInfoAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.PlateAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ProjectAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ReagentAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.RoiAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ScreenAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.SessionAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.ShapeAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.annotations.WellAnnotationLink.Details
-
- getUpdateEvent() - Method in class ome.model.containers.Dataset.Details
-
- getUpdateEvent() - Method in class ome.model.containers.DatasetImageLink.Details
-
- getUpdateEvent() - Method in class ome.model.containers.Folder.Details
-
- getUpdateEvent() - Method in class ome.model.containers.FolderImageLink.Details
-
- getUpdateEvent() - Method in class ome.model.containers.FolderRoiLink.Details
-
- getUpdateEvent() - Method in class ome.model.containers.Project.Details
-
- getUpdateEvent() - Method in class ome.model.containers.ProjectDatasetLink.Details
-
- getUpdateEvent() - Method in class ome.model.core.Channel.Details
-
- getUpdateEvent() - Method in class ome.model.core.Image.Details
-
- getUpdateEvent() - Method in class ome.model.core.LogicalChannel.Details
-
- getUpdateEvent() - Method in class ome.model.core.OriginalFile.Details
-
- getUpdateEvent() - Method in class ome.model.core.Pixels.Details
-
- getUpdateEvent() - Method in class ome.model.core.PixelsOriginalFileMap.Details
-
- getUpdateEvent() - Method in class ome.model.core.PlaneInfo.Details
-
- getUpdateEvent() - Method in class ome.model.display.ChannelBinding.Details
-
- getUpdateEvent() - Method in class ome.model.display.CodomainMapContext.Details
-
- getUpdateEvent() - Method in class ome.model.display.ProjectionDef.Details
-
- getUpdateEvent() - Method in class ome.model.display.QuantumDef.Details
-
- getUpdateEvent() - Method in class ome.model.display.RenderingDef.Details
-
- getUpdateEvent() - Method in class ome.model.display.Thumbnail.Details
-
- getUpdateEvent() - Method in class ome.model.experiment.Experiment.Details
-
- getUpdateEvent() - Method in class ome.model.experiment.MicrobeamManipulation.Details
-
- getUpdateEvent() - Method in class ome.model.fs.Fileset.Details
-
- getUpdateEvent() - Method in class ome.model.fs.FilesetEntry.Details
-
- getUpdateEvent() - Method in class ome.model.fs.FilesetJobLink.Details
-
- getUpdateEvent() - Method in class ome.model.internal.Details
-
- getUpdateEvent() - Method in class ome.model.internal.Link.Details
-
- getUpdateEvent() - Method in class ome.model.jobs.Job.Details
-
- getUpdateEvent() - Method in class ome.model.jobs.JobOriginalFileLink.Details
-
- getUpdateEvent() - Method in class ome.model.meta.ExternalInfo.Details
-
- getUpdateEvent() - Method in class ome.model.roi.AffineTransform.Details
-
- getUpdateEvent() - Method in class ome.model.roi.Roi.Details
-
- getUpdateEvent() - Method in class ome.model.roi.Shape.Details
-
- getUpdateEvent() - Method in class ome.model.screen.Plate.Details
-
- getUpdateEvent() - Method in class ome.model.screen.PlateAcquisition.Details
-
- getUpdateEvent() - Method in class ome.model.screen.Reagent.Details
-
- getUpdateEvent() - Method in class ome.model.screen.Screen.Details
-
- getUpdateEvent() - Method in class ome.model.screen.ScreenPlateLink.Details
-
- getUpdateEvent() - Method in class ome.model.screen.Well.Details
-
- getUpdateEvent() - Method in class ome.model.screen.WellReagentLink.Details
-
- getUpdateEvent() - Method in class ome.model.screen.WellSample.Details
-
- getUpdateEvent() - Method in class ome.model.stats.StatsInfo.Details
-
- getUpperLimit() - Method in class ome.model.display.PlaneSlicingContext
-
Simple field ome.model.display.PlaneSlicingContext.upperLimit (java.lang.Integer)
- getUsedFiles() - Method in class ome.model.fs.Fileset
-
returns usedFiles .
- getUserAgent() - Method in class ome.model.meta.Session
-
Simple field ome.model.meta.Session.userAgent (java.lang.String)
- getUserEmailsByGroup(long) - Method in interface ome.util.SqlAction
-
Load all the non-empty email addresses for users in a given group.
- getUserEmailsByGroup(long) - Method in class ome.util.SqlAction.Impl
-
- getUserGroups(String) - Method in interface ome.util.SqlAction
-
- getUserGroups(String) - Method in class ome.util.SqlAction.Impl
-
- getUserId(String) - Method in interface ome.util.SqlAction
-
Get the user's ID
- getUserId(String) - Method in class ome.util.SqlAction.Impl
-
- getUserIP() - Method in class ome.model.meta.Session
-
Deprecated.
- getUsername() - Method in class ome.model.jobs.Job
-
Simple field ome.model.jobs.Job.username (java.lang.String)
- getUsername(long) - Method in interface ome.util.SqlAction
-
Get the user's name
- getUsername(long) - Method in class ome.util.SqlAction.Impl
-
- getUuid() - Method in class ome.model.meta.ExternalInfo
-
Simple field ome.model.meta.ExternalInfo.uuid (java.lang.String)
- getUuid() - Method in class ome.model.meta.Node
-
Simple field ome.model.meta.Node.uuid (java.lang.String)
- getUuid() - Method in class ome.model.meta.Session
-
Simple field ome.model.meta.Session.uuid (java.lang.String)
- getValue() - Method in class ome.model.enums.AcquisitionMode
-
Simple field ome.model.enums.AcquisitionMode.value (java.lang.String)
- getValue() - Method in class ome.model.enums.AdminPrivilege
-
Simple field ome.model.enums.AdminPrivilege.value (java.lang.String)
- getValue() - Method in class ome.model.enums.ArcType
-
Simple field ome.model.enums.ArcType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.Binning
-
Simple field ome.model.enums.Binning.value (java.lang.String)
- getValue() - Method in class ome.model.enums.ChecksumAlgorithm
-
Simple field ome.model.enums.ChecksumAlgorithm.value (java.lang.String)
- getValue() - Method in class ome.model.enums.ContrastMethod
-
Simple field ome.model.enums.ContrastMethod.value (java.lang.String)
- getValue() - Method in class ome.model.enums.Correction
-
Simple field ome.model.enums.Correction.value (java.lang.String)
- getValue() - Method in class ome.model.enums.DetectorType
-
Simple field ome.model.enums.DetectorType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.DimensionOrder
-
Simple field ome.model.enums.DimensionOrder.value (java.lang.String)
- getValue() - Method in class ome.model.enums.EventType
-
Simple field ome.model.enums.EventType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.ExperimentType
-
Simple field ome.model.enums.ExperimentType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.Family
-
Simple field ome.model.enums.Family.value (java.lang.String)
- getValue() - Method in class ome.model.enums.FilamentType
-
Simple field ome.model.enums.FilamentType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.FilterType
-
Simple field ome.model.enums.FilterType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.Format
-
Simple field ome.model.enums.Format.value (java.lang.String)
- getValue() - Method in class ome.model.enums.Illumination
-
Simple field ome.model.enums.Illumination.value (java.lang.String)
- getValue() - Method in class ome.model.enums.Immersion
-
Simple field ome.model.enums.Immersion.value (java.lang.String)
- getValue() - Method in class ome.model.enums.LaserMedium
-
Simple field ome.model.enums.LaserMedium.value (java.lang.String)
- getValue() - Method in class ome.model.enums.LaserType
-
Simple field ome.model.enums.LaserType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.Medium
-
Simple field ome.model.enums.Medium.value (java.lang.String)
- getValue() - Method in class ome.model.enums.MicrobeamManipulationType
-
Simple field ome.model.enums.MicrobeamManipulationType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.MicroscopeType
-
Simple field ome.model.enums.MicroscopeType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.PhotometricInterpretation
-
Simple field ome.model.enums.PhotometricInterpretation.value (java.lang.String)
- getValue() - Method in class ome.model.enums.PixelsType
-
Simple field ome.model.enums.PixelsType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.ProjectionAxis
-
Simple field ome.model.enums.ProjectionAxis.value (java.lang.String)
- getValue() - Method in class ome.model.enums.ProjectionType
-
Simple field ome.model.enums.ProjectionType.value (java.lang.String)
- getValue() - Method in class ome.model.enums.Pulse
-
Simple field ome.model.enums.Pulse.value (java.lang.String)
- getValue() - Method in class ome.model.enums.RenderingModel
-
Simple field ome.model.enums.RenderingModel.value (java.lang.String)
- getValue() - Method in interface ome.model.IEnum
-
the single String value associated with this instance.
- getValue() - Method in class ome.model.internal.NamedValue
-
- getValue() - Method in class ome.model.jobs.JobStatus
-
Simple field ome.model.jobs.JobStatus.value (java.lang.String)
- getValue() - Method in class ome.model.units.ElectricPotential
-
value of this unit-field.
- getValue() - Method in class ome.model.units.Frequency
-
value of this unit-field.
- getValue() - Method in class ome.model.units.Length
-
value of this unit-field.
- getValue() - Method in class ome.model.units.Power
-
value of this unit-field.
- getValue() - Method in class ome.model.units.Pressure
-
value of this unit-field.
- getValue() - Method in class ome.model.units.Temperature
-
value of this unit-field.
- getValue() - Method in class ome.model.units.Time
-
value of this unit-field.
- getValue() - Method in interface ome.model.units.Unit
-
- getVersion() - Method in class ome.model.acquisition.Detector
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.DetectorSettings
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.Dichroic
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.Filter
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.FilterSet
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.FilterSetEmissionFilterLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.FilterSetExcitationFilterLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.ImagingEnvironment
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.Instrument
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.LightPath
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.LightPathEmissionFilterLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.LightPathExcitationFilterLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.LightSettings
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.LightSource
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.Microscope
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.Objective
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.ObjectiveSettings
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.OTF
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.StageLabel
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.acquisition.TransmittanceRange
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.Annotation
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.AnnotationAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ChannelAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.DatasetAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.DetectorAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.DichroicAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ExperimenterAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.FilesetAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.FilterAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.FolderAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ImageAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.InstrumentAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.LightPathAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.LightSourceAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.NamespaceAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.NodeAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ObjectiveAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.OriginalFileAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.PlaneInfoAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.PlateAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ProjectAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ReagentAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.RoiAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ScreenAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.SessionAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.ShapeAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.annotations.WellAnnotationLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.containers.Dataset
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.containers.DatasetImageLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.containers.Folder
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.containers.FolderImageLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.containers.FolderRoiLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.containers.Project
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.containers.ProjectDatasetLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.core.Channel
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.core.Image
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.core.LogicalChannel
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.core.OriginalFile
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.core.Pixels
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.core.PixelsOriginalFileMap
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.core.PlaneInfo
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.display.ChannelBinding
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.display.CodomainMapContext
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.display.ProjectionDef
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.display.QuantumDef
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.display.RenderingDef
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.display.Thumbnail
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.experiment.Experiment
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.experiment.MicrobeamManipulation
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.fs.Fileset
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.fs.FilesetEntry
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.fs.FilesetJobLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in interface ome.model.IMutable
-
optimistic-lock version.
- getVersion() - Method in class ome.model.internal.Link
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.jobs.Job
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.jobs.JobOriginalFileLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.meta.Experimenter
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.meta.ExperimenterGroup
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.meta.GroupExperimenterMap
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.meta.Namespace
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.meta.Node
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.meta.Session
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.meta.ShareMember
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.roi.AffineTransform
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.roi.Roi
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.roi.Shape
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.screen.Plate
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.screen.PlateAcquisition
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.screen.Reagent
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.screen.Screen
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.screen.ScreenPlateLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.screen.Well
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.screen.WellReagentLink
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.screen.WellSample
-
This version number is controlled by the database for optimisitic
locking.
- getVersion() - Method in class ome.model.stats.StatsInfo
-
This version number is controlled by the database for optimisitic
locking.
- getVersionInfo() - Method in class ome.model.jobs.MetadataImportJob
-
- getVersionInfo() - Method in class ome.model.jobs.UploadJob
-
- getVoltage() - Method in class ome.model.acquisition.Detector
-
Enum-mapped unit-based field ome.model.acquisition.Detector.voltage (ome.model.units.ElectricPotential)
- getVoltage() - Method in class ome.model.acquisition.DetectorSettings
-
Enum-mapped unit-based field ome.model.acquisition.DetectorSettings.voltage (ome.model.units.ElectricPotential)
- getWaveIncrement() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.waveIncrement (java.lang.Integer)
- getWavelength() - Method in class ome.model.acquisition.Laser
-
Enum-mapped unit-based field ome.model.acquisition.Laser.wavelength (ome.model.units.Length)
- getWavelength() - Method in class ome.model.acquisition.LightSettings
-
Enum-mapped unit-based field ome.model.acquisition.LightSettings.wavelength (ome.model.units.Length)
- getWaveRendering() - Method in class ome.model.display.RenderingDef
-
returns waveRendering .
- getWaveStart() - Method in class ome.model.core.Pixels
-
Simple field ome.model.core.Pixels.waveStart (java.lang.Integer)
- getWell() - Method in class ome.model.screen.WellSample
-
Many-to-one field ome.model.screen.WellSample.well (ome.model.screen.Well)
- getWellLinks() - Method in class ome.model.screen.Reagent
-
returns wellLinks .
- getWellLinksCountPerOwner() - Method in class ome.model.screen.Reagent
-
If fetched, returns the count(*) of ome.model.screen.WellReagentLink that a user has.
- getWellOriginX() - Method in class ome.model.screen.Plate
-
Enum-mapped unit-based field ome.model.screen.Plate.wellOriginX (ome.model.units.Length)
- getWellOriginY() - Method in class ome.model.screen.Plate
-
Enum-mapped unit-based field ome.model.screen.Plate.wellOriginY (ome.model.units.Length)
- getWells() - Method in class ome.model.screen.Plate
-
returns wells .
- getWellSample() - Method in class ome.model.screen.PlateAcquisition
-
returns wellSample .
- getWellSample(int) - Method in class ome.model.screen.Well
-
Gets the ome.model.screen.WellSample at the given index.
- getWellSamples() - Method in class ome.model.core.Image
-
returns wellSamples .
- getWellSamples() - Method in class ome.model.screen.Well
-
returns wellSamples .
- getWidth() - Method in class ome.model.roi.Mask
-
Simple field ome.model.roi.Mask.width (java.lang.Double)
- getWidth() - Method in class ome.model.roi.Rectangle
-
Simple field ome.model.roi.Rectangle.width (java.lang.Double)
- getWorkingDistance() - Method in class ome.model.acquisition.Objective
-
Enum-mapped unit-based field ome.model.acquisition.Objective.workingDistance (ome.model.units.Length)
- getX() - Method in class ome.model.roi.Ellipse
-
Simple field ome.model.roi.Ellipse.x (java.lang.Double)
- getX() - Method in class ome.model.roi.Label
-
Simple field ome.model.roi.Label.x (java.lang.Double)
- getX() - Method in class ome.model.roi.Mask
-
Simple field ome.model.roi.Mask.x (java.lang.Double)
- getX() - Method in class ome.model.roi.Point
-
Simple field ome.model.roi.Point.x (java.lang.Double)
- getX() - Method in class ome.model.roi.Rectangle
-
Simple field ome.model.roi.Rectangle.x (java.lang.Double)
- getX1() - Method in class ome.model.roi.Line
-
Simple field ome.model.roi.Line.x1 (java.lang.Double)
- getX2() - Method in class ome.model.roi.Line
-
Simple field ome.model.roi.Line.x2 (java.lang.Double)
- getXend() - Method in class ome.model.display.ContrastStretchingContext
-
Simple field ome.model.display.ContrastStretchingContext.xend (java.lang.Integer)
- getXstart() - Method in class ome.model.display.ContrastStretchingContext
-
Simple field ome.model.display.ContrastStretchingContext.xstart (java.lang.Integer)
- getY() - Method in class ome.model.roi.Ellipse
-
Simple field ome.model.roi.Ellipse.y (java.lang.Double)
- getY() - Method in class ome.model.roi.Label
-
Simple field ome.model.roi.Label.y (java.lang.Double)
- getY() - Method in class ome.model.roi.Mask
-
Simple field ome.model.roi.Mask.y (java.lang.Double)
- getY() - Method in class ome.model.roi.Point
-
Simple field ome.model.roi.Point.y (java.lang.Double)
- getY() - Method in class ome.model.roi.Rectangle
-
Simple field ome.model.roi.Rectangle.y (java.lang.Double)
- getY1() - Method in class ome.model.roi.Line
-
Simple field ome.model.roi.Line.y1 (java.lang.Double)
- getY2() - Method in class ome.model.roi.Line
-
Simple field ome.model.roi.Line.y2 (java.lang.Double)
- getYend() - Method in class ome.model.display.ContrastStretchingContext
-
Simple field ome.model.display.ContrastStretchingContext.yend (java.lang.Integer)
- getYstart() - Method in class ome.model.display.ContrastStretchingContext
-
Simple field ome.model.display.ContrastStretchingContext.ystart (java.lang.Integer)
- getZoom() - Method in class ome.model.acquisition.Detector
-
Simple field ome.model.acquisition.Detector.zoom (java.lang.Double)
- getZoom() - Method in class ome.model.acquisition.DetectorSettings
-
Simple field ome.model.acquisition.DetectorSettings.zoom (java.lang.Double)
- globalMax - Variable in class ome.model.stats.StatsInfo
-
- GLOBALMAX - Static variable in class ome.model.stats.StatsInfo
-
- globalMin - Variable in class ome.model.stats.StatsInfo
-
- GLOBALMIN - Static variable in class ome.model.stats.StatsInfo
-
- grant(Permissions.Role, Permissions.Right...) - Method in class ome.model.internal.Permissions
-
- grantAll(Permissions) - Method in class ome.model.internal.Permissions
-
takes a permissions instance and ORs it with the current instance.
- GraphHolder - Class in ome.model.internal
-
holds information regarding the graph to which an
IObject
belongs.
- GraphHolder() - Constructor for class ome.model.internal.GraphHolder
-
- green - Variable in class ome.model.core.Channel
-
- GREEN - Static variable in class ome.model.core.Channel
-
- green - Variable in class ome.model.display.ChannelBinding
-
- GREEN - Static variable in class ome.model.display.ChannelBinding
-
- green - Variable in class ome.model.screen.Well
-
- GREEN - Static variable in class ome.model.screen.Well
-
- GROUP - Static variable in class ome.model.internal.Details
-
- group - Variable in class ome.model.meta.Share
-
- GROUP - Static variable in class ome.model.meta.Share
-
- group(long) - Method in class ome.parameters.Filter
-
- group() - Method in class ome.parameters.Filter
-
- group() - Method in class ome.parameters.Parameters
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Arc
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Detector
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.DetectorSettings
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Dichroic
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Filament
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Filter
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.FilterSet
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.FilterSetEmissionFilterLink
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.FilterSetExcitationFilterLink
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.GenericExcitationSource
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.ImagingEnvironment
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Laser
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.LightEmittingDiode
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.LightPath
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.LightPathEmissionFilterLink
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.LightPathExcitationFilterLink
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.LightSettings
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.LightSource
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Microscope
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.Objective
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.ObjectiveSettings
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.OTF
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.StageLabel
-
- GROUP_FILTER - Static variable in class ome.model.acquisition.TransmittanceRange
-
- GROUP_FILTER - Static variable in class ome.model.annotations.Annotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.AnnotationAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.BasicAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.BooleanAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ChannelAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.CommentAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.DatasetAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.DetectorAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.DichroicAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.DoubleAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ExperimenterAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ExperimenterGroupAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.FileAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.FilesetAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.FilterAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.FolderAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ImageAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.InstrumentAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.LightPathAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.LightSourceAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ListAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.LongAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.MapAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.NamespaceAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.NodeAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.NumericAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ObjectiveAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.OriginalFileAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.PlaneInfoAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.PlateAcquisitionAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.PlateAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ProjectAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ReagentAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.RoiAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ScreenAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.SessionAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.ShapeAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.TagAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.TermAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.TextAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.TimestampAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.TypeAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.annotations.WellAnnotationLink
-
- GROUP_FILTER - Static variable in class ome.model.annotations.XmlAnnotation
-
- GROUP_FILTER - Static variable in class ome.model.containers.Dataset
-
- GROUP_FILTER - Static variable in class ome.model.containers.DatasetImageLink
-
- GROUP_FILTER - Static variable in class ome.model.containers.Folder
-
- GROUP_FILTER - Static variable in class ome.model.containers.FolderImageLink
-
- GROUP_FILTER - Static variable in class ome.model.containers.FolderRoiLink
-
- GROUP_FILTER - Static variable in class ome.model.containers.Project
-
- GROUP_FILTER - Static variable in class ome.model.containers.ProjectDatasetLink
-
- GROUP_FILTER - Static variable in class ome.model.core.Channel
-
- GROUP_FILTER - Static variable in class ome.model.core.Image
-
- GROUP_FILTER - Static variable in class ome.model.core.LogicalChannel
-
- GROUP_FILTER - Static variable in class ome.model.core.OriginalFile
-
- GROUP_FILTER - Static variable in class ome.model.core.Pixels
-
- GROUP_FILTER - Static variable in class ome.model.core.PixelsOriginalFileMap
-
- GROUP_FILTER - Static variable in class ome.model.core.PlaneInfo
-
- GROUP_FILTER - Static variable in class ome.model.display.ChannelBinding
-
- GROUP_FILTER - Static variable in class ome.model.display.CodomainMapContext
-
- GROUP_FILTER - Static variable in class ome.model.display.ContrastStretchingContext
-
- GROUP_FILTER - Static variable in class ome.model.display.PlaneSlicingContext
-
- GROUP_FILTER - Static variable in class ome.model.display.ProjectionDef
-
- GROUP_FILTER - Static variable in class ome.model.display.QuantumDef
-
- GROUP_FILTER - Static variable in class ome.model.display.RenderingDef
-
- GROUP_FILTER - Static variable in class ome.model.display.ReverseIntensityContext
-
- GROUP_FILTER - Static variable in class ome.model.display.Thumbnail
-
- GROUP_FILTER - Static variable in class ome.model.experiment.Experiment
-
- GROUP_FILTER - Static variable in class ome.model.experiment.MicrobeamManipulation
-
- GROUP_FILTER - Static variable in class ome.model.fs.Fileset
-
- GROUP_FILTER - Static variable in class ome.model.fs.FilesetEntry
-
- GROUP_FILTER - Static variable in class ome.model.fs.FilesetJobLink
-
- GROUP_FILTER - Static variable in class ome.model.internal.Link
-
- GROUP_FILTER - Static variable in class ome.model.jobs.ImportJob
-
Deprecated.
- GROUP_FILTER - Static variable in class ome.model.jobs.IndexingJob
-
- GROUP_FILTER - Static variable in class ome.model.jobs.IntegrityCheckJob
-
- GROUP_FILTER - Static variable in class ome.model.jobs.Job
-
- GROUP_FILTER - Static variable in class ome.model.jobs.JobOriginalFileLink
-
- GROUP_FILTER - Static variable in class ome.model.jobs.MetadataImportJob
-
- GROUP_FILTER - Static variable in class ome.model.jobs.ParseJob
-
- GROUP_FILTER - Static variable in class ome.model.jobs.PixelDataJob
-
- GROUP_FILTER - Static variable in class ome.model.jobs.ScriptJob
-
- GROUP_FILTER - Static variable in class ome.model.jobs.ThumbnailGenerationJob
-
- GROUP_FILTER - Static variable in class ome.model.jobs.UploadJob
-
- GROUP_FILTER - Static variable in class ome.model.meta.ExternalInfo
-
- GROUP_FILTER - Static variable in class ome.model.roi.AffineTransform
-
- GROUP_FILTER - Static variable in class ome.model.roi.Ellipse
-
- GROUP_FILTER - Static variable in class ome.model.roi.Label
-
- GROUP_FILTER - Static variable in class ome.model.roi.Line
-
- GROUP_FILTER - Static variable in class ome.model.roi.Mask
-
- GROUP_FILTER - Static variable in class ome.model.roi.Path
-
Deprecated.
- GROUP_FILTER - Static variable in class ome.model.roi.Point
-
- GROUP_FILTER - Static variable in class ome.model.roi.Polygon
-
- GROUP_FILTER - Static variable in class ome.model.roi.Polyline
-
- GROUP_FILTER - Static variable in class ome.model.roi.Rectangle
-
- GROUP_FILTER - Static variable in class ome.model.roi.Roi
-
- GROUP_FILTER - Static variable in class ome.model.roi.Shape
-
- GROUP_FILTER - Static variable in class ome.model.screen.Plate
-
- GROUP_FILTER - Static variable in class ome.model.screen.PlateAcquisition
-
- GROUP_FILTER - Static variable in class ome.model.screen.Reagent
-
- GROUP_FILTER - Static variable in class ome.model.screen.Screen
-
- GROUP_FILTER - Static variable in class ome.model.screen.ScreenPlateLink
-
- GROUP_FILTER - Static variable in class ome.model.screen.Well
-
- GROUP_FILTER - Static variable in class ome.model.screen.WellReagentLink
-
- GROUP_FILTER - Static variable in class ome.model.screen.WellSample
-
- GROUP_FILTER - Static variable in class ome.model.stats.StatsInfo
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Detector
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Dichroic
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Filter
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.LightPath
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.LightSource
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.acquisition.Objective
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.annotations.Annotation
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.containers.Dataset
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.containers.Folder
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.containers.Project
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.core.Channel
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.core.Image
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.core.OriginalFile
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.core.PlaneInfo
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.fs.Fileset
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.Experimenter
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.ExperimenterGroup
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.Namespace
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.Node
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.meta.Session
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.roi.Roi
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.roi.Shape
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.Plate
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.PlateAcquisition
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.Reagent
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.Screen
-
- GROUP_FILTER_ANNOTATIONLINKS - Static variable in class ome.model.screen.Well
-
- GROUP_FILTER_CHANNELS - Static variable in class ome.model.core.LogicalChannel
-
- GROUP_FILTER_CHANNELS - Static variable in class ome.model.core.Pixels
-
- GROUP_FILTER_CHILDFOLDERS - Static variable in class ome.model.containers.Folder
-
- GROUP_FILTER_DATASETLINKS - Static variable in class ome.model.containers.Project
-
- GROUP_FILTER_DATASETLINKS - Static variable in class ome.model.core.Image
-
- GROUP_FILTER_DETECTOR - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER_DICHROIC - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER_EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.Filter
-
- GROUP_FILTER_EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.FilterSet
-
- GROUP_FILTER_EMISSIONFILTERLINK - Static variable in class ome.model.acquisition.LightPath
-
- GROUP_FILTER_EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.Filter
-
- GROUP_FILTER_EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.FilterSet
-
- GROUP_FILTER_EXCITATIONFILTERLINK - Static variable in class ome.model.acquisition.LightPath
-
- GROUP_FILTER_FILESETENTRIES - Static variable in class ome.model.core.OriginalFile
-
- GROUP_FILTER_FILTER - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER_FILTERSET - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER_FOLDERLINKS - Static variable in class ome.model.core.Image
-
- GROUP_FILTER_FOLDERLINKS - Static variable in class ome.model.roi.Roi
-
- GROUP_FILTER_IMAGELINKS - Static variable in class ome.model.containers.Dataset
-
- GROUP_FILTER_IMAGELINKS - Static variable in class ome.model.containers.Folder
-
- GROUP_FILTER_IMAGES - Static variable in class ome.model.fs.Fileset
-
- GROUP_FILTER_JOBLINKS - Static variable in class ome.model.fs.Fileset
-
- GROUP_FILTER_LIGHTSOURCE - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER_LIGHTSOURCESETTINGS - Static variable in class ome.model.experiment.MicrobeamManipulation
-
- GROUP_FILTER_MICROBEAMMANIPULATION - Static variable in class ome.model.experiment.Experiment
-
- GROUP_FILTER_OBJECTIVE - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER_ORIGINALFILELINKS - Static variable in class ome.model.jobs.Job
-
- GROUP_FILTER_OTF - Static variable in class ome.model.acquisition.Instrument
-
- GROUP_FILTER_PIXELS - Static variable in class ome.model.core.Image
-
- GROUP_FILTER_PIXELSFILEMAPS - Static variable in class ome.model.core.OriginalFile
-
- GROUP_FILTER_PIXELSFILEMAPS - Static variable in class ome.model.core.Pixels
-
- GROUP_FILTER_PLANEINFO - Static variable in class ome.model.core.Pixels
-
- GROUP_FILTER_PLATEACQUISITIONS - Static variable in class ome.model.screen.Plate
-
- GROUP_FILTER_PLATELINKS - Static variable in class ome.model.screen.Screen
-
- GROUP_FILTER_PROJECTIONS - Static variable in class ome.model.display.RenderingDef
-
- GROUP_FILTER_PROJECTLINKS - Static variable in class ome.model.containers.Dataset
-
- GROUP_FILTER_REAGENTLINKS - Static variable in class ome.model.screen.Well
-
- GROUP_FILTER_REAGENTS - Static variable in class ome.model.screen.Screen
-
- GROUP_FILTER_ROILINKS - Static variable in class ome.model.containers.Folder
-
- GROUP_FILTER_ROIS - Static variable in class ome.model.core.Image
-
- GROUP_FILTER_SCREENLINKS - Static variable in class ome.model.screen.Plate
-
- GROUP_FILTER_SETTINGS - Static variable in class ome.model.core.Pixels
-
- GROUP_FILTER_SHAPES - Static variable in class ome.model.roi.Roi
-
- GROUP_FILTER_SPATIALDOMAINENHANCEMENT - Static variable in class ome.model.display.ChannelBinding
-
- GROUP_FILTER_THUMBNAILS - Static variable in class ome.model.core.Pixels
-
- GROUP_FILTER_USEDFILES - Static variable in class ome.model.fs.Fileset
-
- GROUP_FILTER_WAVERENDERING - Static variable in class ome.model.display.RenderingDef
-
- GROUP_FILTER_WELLLINKS - Static variable in class ome.model.screen.Reagent
-
- GROUP_FILTER_WELLS - Static variable in class ome.model.screen.Plate
-
- GROUP_FILTER_WELLSAMPLE - Static variable in class ome.model.screen.PlateAcquisition
-
- GROUP_FILTER_WELLSAMPLES - Static variable in class ome.model.core.Image
-
- GROUP_FILTER_WELLSAMPLES - Static variable in class ome.model.screen.Well
-
- GROUP_ID - Static variable in class ome.parameters.Parameters
-
named parameter "groupId".
- GROUP_IMMUTABLE - Static variable in class ome.model.internal.Permissions
-
R_R___ : user and group can only read
- GROUP_PRIVATE - Static variable in class ome.model.internal.Permissions
-
RWRW__ : user and group can read and write
- GROUP_READABLE - Static variable in class ome.model.internal.Permissions
-
RWR___ : user can read and write, group can read
- GROUP_WRITEABLE - Static variable in class ome.model.internal.Permissions
-
RWRWR_ : user and group can read and write, world can read
- groupExperimenterMap - Variable in class ome.model.meta.Experimenter
-
- GROUPEXPERIMENTERMAP - Static variable in class ome.model.meta.Experimenter
-
- groupExperimenterMap - Variable in class ome.model.meta.ExperimenterGroup
-
- GROUPEXPERIMENTERMAP - Static variable in class ome.model.meta.ExperimenterGroup
-
- GroupExperimenterMap - Class in ome.model.meta
-
- GroupExperimenterMap() - Constructor for class ome.model.meta.GroupExperimenterMap
-
- GroupExperimenterMap(Long) - Constructor for class ome.model.meta.GroupExperimenterMap
-
- GroupExperimenterMap(Long, boolean) - Constructor for class ome.model.meta.GroupExperimenterMap
-
Main constructor.
- GroupExperimenterMap(IObject, IObject, Boolean) - Constructor for class ome.model.meta.GroupExperimenterMap
-
- GroupExperimenterMap.Details - Class in ome.model.meta
-
- groupId - Variable in class ome.util.SqlAction.DeleteLog
-
- groupInfoFor(String, long) - Method in interface ome.util.SqlAction
-
Return a mostly unloaded
ExperimenterGroup
object containing
only the id, name, and permissions.
- groupInfoFor(String, long) - Method in class ome.util.SqlAction.Impl
-
- groupname - Variable in class ome.model.jobs.Job
-
- GROUPNAME - Static variable in class ome.model.jobs.Job
-
- GroupSecurityViolation - Exception in ome.conditions
-
Extension of
SecurityViolation
which signifies that the violation
in question goes against the group-based permissions introduced in 4.2.
- GroupSecurityViolation(String) - Constructor for exception ome.conditions.GroupSecurityViolation
-
- grp(long) - Method in class ome.parameters.Parameters
-
- radiusX - Variable in class ome.model.roi.Ellipse
-
- RADIUSX - Static variable in class ome.model.roi.Ellipse
-
- radiusY - Variable in class ome.model.roi.Ellipse
-
- RADIUSY - Static variable in class ome.model.roi.Ellipse
-
- Rat(long, long) - Static method in class ome.model.units.Conversion
-
- Rat(Conversion...) - Static method in class ome.model.units.Conversion
-
- Rat(long, long) - Constructor for class ome.model.units.Conversion.Rat
-
- Rat(Conversion...) - Constructor for class ome.model.units.Conversion.Rat
-
- RdfPrinter - Class in ome.util
-
walks an object graph producing RDF-like output.
- RdfPrinter() - Constructor for class ome.util.RdfPrinter
-
- READ_ONLY - Static variable in class ome.model.internal.Permissions
-
- ReadOnlyGroupSecurityViolation - Exception in ome.conditions
-
Extension of
GroupSecurityViolation
signalling that an admin or
group owner has tried to make a modification in a private group OR that
the member of a read-only group has tried to do the same.
- ReadOnlyGroupSecurityViolation(String) - Constructor for exception ome.conditions.ReadOnlyGroupSecurityViolation
-
- readOutRate - Variable in class ome.model.acquisition.DetectorSettings
-
- READOUTRATE - Static variable in class ome.model.acquisition.DetectorSettings
-
- Reagent - Class in ome.model.screen
-
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
- Reagent() - Constructor for class ome.model.screen.Reagent
-
- Reagent(Long) - Constructor for class ome.model.screen.Reagent
-
- Reagent(Long, boolean) - Constructor for class ome.model.screen.Reagent
-
Main constructor.
- Reagent(Screen) - Constructor for class ome.model.screen.Reagent
-
- Reagent.Details - Class in ome.model.screen
-
- ReagentAnnotationLink - Class in ome.model.annotations
-
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
- ReagentAnnotationLink() - Constructor for class ome.model.annotations.ReagentAnnotationLink
-
- ReagentAnnotationLink(Long) - Constructor for class ome.model.annotations.ReagentAnnotationLink
-
- ReagentAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.ReagentAnnotationLink
-
Main constructor.
- ReagentAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.ReagentAnnotationLink
-
- ReagentAnnotationLink.Details - Class in ome.model.annotations
-
- reagentIdentifier - Variable in class ome.model.screen.Reagent
-
- REAGENTIDENTIFIER - Static variable in class ome.model.screen.Reagent
-
- reagentLinks - Variable in class ome.model.screen.Well
-
- REAGENTLINKS - Static variable in class ome.model.screen.Well
-
- REAGENTLINKSCOUNTPEROWNER - Static variable in class ome.model.screen.Well
-
- reagents - Variable in class ome.model.screen.Screen
-
- REAGENTS - Static variable in class ome.model.screen.Screen
-
- reagentSetDescription - Variable in class ome.model.screen.Screen
-
- REAGENTSETDESCRIPTION - Static variable in class ome.model.screen.Screen
-
- reagentSetIdentifier - Variable in class ome.model.screen.Screen
-
- REAGENTSETIDENTIFIER - Static variable in class ome.model.screen.Screen
-
- Rectangle - Class in ome.model.roi
-
- Rectangle() - Constructor for class ome.model.roi.Rectangle
-
- Rectangle(Long) - Constructor for class ome.model.roi.Rectangle
-
- Rectangle(Long, boolean) - Constructor for class ome.model.roi.Rectangle
-
Main constructor.
- red - Variable in class ome.model.core.Channel
-
- RED - Static variable in class ome.model.core.Channel
-
- red - Variable in class ome.model.display.ChannelBinding
-
- RED - Static variable in class ome.model.display.ChannelBinding
-
- red - Variable in class ome.model.screen.Well
-
- RED - Static variable in class ome.model.screen.Well
-
- ref - Variable in class ome.model.display.Thumbnail
-
- REF - Static variable in class ome.model.display.Thumbnail
-
- reflectiveNewInstance(T) - Static method in class ome.util.ShallowCopy
-
- refractiveIndex - Variable in class ome.model.acquisition.ObjectiveSettings
-
- REFRACTIVEINDEX - Static variable in class ome.model.acquisition.ObjectiveSettings
-
- refreshEventLogFromUpdatedAnnotations() - Method in class ome.util.SqlAction.Impl
-
- refreshEventLogFromUpdatedAnnotations() - Method in interface ome.util.SqlAction
-
Convert the _reindexing_required table to REINDEX entries in the event log.
- relatedTo - Variable in class ome.model.core.Pixels
-
Deprecated.
- RELATEDTO - Static variable in class ome.model.core.Pixels
-
Deprecated.
- releaseSavepoint(String) - Method in class ome.util.actions.PostgresSqlAction
-
- releaseSavepoint(String) - Method in interface ome.util.SqlAction
-
- remove(Serializable, SessionImplementor) - Method in class ome.util.CountCollectionPersister
-
- remove() - Method in class ome.util.EmptyIterator
-
- removeAnnotationAnnotationLink(AnnotationAnnotationLink) - Method in class ome.model.annotations.Annotation
-
removes a single element from this set and makes the inverse call on ome.model.annotations.AnnotationAnnotationLink
- removeAnnotationAnnotationLink(AnnotationAnnotationLink, boolean) - Method in class ome.model.annotations.Annotation
-
removes the given AnnotationAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkAnnotation again if loaded.
- removeAnnotationAnnotationLinkSet(Collection<AnnotationAnnotationLink>) - Method in class ome.model.annotations.Annotation
-
use like removeAnnotationAnnotationLink
- removeChannel(Channel) - Method in class ome.model.core.LogicalChannel
-
removes a single element from this set and makes the inverse call on ome.model.core.Channel
- removeChannel(Channel) - Method in class ome.model.core.Pixels
-
removes a single element from this set and makes the inverse call on ome.model.core.Channel
- removeChannelAnnotationLink(ChannelAnnotationLink) - Method in class ome.model.core.Channel
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ChannelAnnotationLink
- removeChannelAnnotationLink(ChannelAnnotationLink, boolean) - Method in class ome.model.core.Channel
-
removes the given ChannelAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkChannel again if loaded.
- removeChannelAnnotationLinkSet(Collection<ChannelAnnotationLink>) - Method in class ome.model.core.Channel
-
use like removeChannelAnnotationLink
- removeChannelBinding(ChannelBinding) - Method in class ome.model.display.RenderingDef
-
removes a single element from this set and makes the inverse call on ome.model.display.ChannelBinding
- removeChannelBindingSet(Collection<ChannelBinding>) - Method in class ome.model.display.RenderingDef
-
use like removeChannelBinding
- removeChannelSet(Collection<Channel>) - Method in class ome.model.core.LogicalChannel
-
use like removeChannel
- removeChannelSet(Collection<Channel>) - Method in class ome.model.core.Pixels
-
use like removeChannel
- removeChildFolders(Folder) - Method in class ome.model.containers.Folder
-
removes a single element from this set and makes the inverse call on ome.model.containers.Folder
- removeChildFoldersSet(Collection<Folder>) - Method in class ome.model.containers.Folder
-
use like removeFolder
- removeCodomainMapContext(CodomainMapContext) - Method in class ome.model.display.ChannelBinding
-
removes a single element from this set and makes the inverse call on ome.model.display.CodomainMapContext
- removeCodomainMapContextSet(Collection<CodomainMapContext>) - Method in class ome.model.display.ChannelBinding
-
use like removeCodomainMapContext
- removeDatasetAnnotationLink(DatasetAnnotationLink) - Method in class ome.model.containers.Dataset
-
removes a single element from this set and makes the inverse call on ome.model.annotations.DatasetAnnotationLink
- removeDatasetAnnotationLink(DatasetAnnotationLink, boolean) - Method in class ome.model.containers.Dataset
-
removes the given DatasetAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkDataset again if loaded.
- removeDatasetAnnotationLinkSet(Collection<DatasetAnnotationLink>) - Method in class ome.model.containers.Dataset
-
use like removeDatasetAnnotationLink
- removeDatasetImageLink(DatasetImageLink) - Method in class ome.model.containers.Dataset
-
removes a single element from this set and makes the inverse call on ome.model.containers.DatasetImageLink
- removeDatasetImageLink(DatasetImageLink, boolean) - Method in class ome.model.containers.Dataset
-
removes the given DatasetImageLink from imageLinks, allowing for recursion -- whether
or not the removal will call unlinkDataset again if loaded.
- removeDatasetImageLink(DatasetImageLink) - Method in class ome.model.core.Image
-
removes a single element from this set and makes the inverse call on ome.model.containers.DatasetImageLink
- removeDatasetImageLink(DatasetImageLink, boolean) - Method in class ome.model.core.Image
-
removes the given DatasetImageLink from datasetLinks, allowing for recursion -- whether
or not the removal will call unlinkImage again if loaded.
- removeDatasetImageLinkSet(Collection<DatasetImageLink>) - Method in class ome.model.containers.Dataset
-
use like removeDatasetImageLink
- removeDatasetImageLinkSet(Collection<DatasetImageLink>) - Method in class ome.model.core.Image
-
use like removeDatasetImageLink
- removeDetector(Detector) - Method in class ome.model.acquisition.Instrument
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.Detector
- removeDetectorAnnotationLink(DetectorAnnotationLink) - Method in class ome.model.acquisition.Detector
-
removes a single element from this set and makes the inverse call on ome.model.annotations.DetectorAnnotationLink
- removeDetectorAnnotationLink(DetectorAnnotationLink, boolean) - Method in class ome.model.acquisition.Detector
-
removes the given DetectorAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkDetector again if loaded.
- removeDetectorAnnotationLinkSet(Collection<DetectorAnnotationLink>) - Method in class ome.model.acquisition.Detector
-
use like removeDetectorAnnotationLink
- removeDetectorSet(Collection<Detector>) - Method in class ome.model.acquisition.Instrument
-
use like removeDetector
- removeDichroic(Dichroic) - Method in class ome.model.acquisition.Instrument
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.Dichroic
- removeDichroicAnnotationLink(DichroicAnnotationLink) - Method in class ome.model.acquisition.Dichroic
-
removes a single element from this set and makes the inverse call on ome.model.annotations.DichroicAnnotationLink
- removeDichroicAnnotationLink(DichroicAnnotationLink, boolean) - Method in class ome.model.acquisition.Dichroic
-
removes the given DichroicAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkDichroic again if loaded.
- removeDichroicAnnotationLinkSet(Collection<DichroicAnnotationLink>) - Method in class ome.model.acquisition.Dichroic
-
use like removeDichroicAnnotationLink
- removeDichroicSet(Collection<Dichroic>) - Method in class ome.model.acquisition.Instrument
-
use like removeDichroic
- RemovedSessionException - Exception in ome.conditions
-
Client attempted to access a session which has either
expired
or been closed manually.
- RemovedSessionException(String) - Constructor for exception ome.conditions.RemovedSessionException
-
- removeEvent(Event) - Method in class ome.model.meta.Session
-
removes a single element from this set and makes the inverse call on ome.model.meta.Event
- removeEventLog(EventLog) - Method in class ome.model.meta.Event
-
removes a single element from this set and makes the inverse call on ome.model.meta.EventLog
- removeEventLogSet(Collection<EventLog>) - Method in class ome.model.meta.Event
-
use like removeEventLog
- removeEventSet(Collection<Event>) - Method in class ome.model.meta.Session
-
use like removeEvent
- removeExperimenterAnnotationLink(ExperimenterAnnotationLink) - Method in class ome.model.meta.Experimenter
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ExperimenterAnnotationLink
- removeExperimenterAnnotationLink(ExperimenterAnnotationLink, boolean) - Method in class ome.model.meta.Experimenter
-
removes the given ExperimenterAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkExperimenter again if loaded.
- removeExperimenterAnnotationLinkSet(Collection<ExperimenterAnnotationLink>) - Method in class ome.model.meta.Experimenter
-
use like removeExperimenterAnnotationLink
- removeExperimenterGroupAnnotationLink(ExperimenterGroupAnnotationLink) - Method in class ome.model.meta.ExperimenterGroup
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ExperimenterGroupAnnotationLink
- removeExperimenterGroupAnnotationLink(ExperimenterGroupAnnotationLink, boolean) - Method in class ome.model.meta.ExperimenterGroup
-
removes the given ExperimenterGroupAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkExperimenterGroup again if loaded.
- removeExperimenterGroupAnnotationLinkSet(Collection<ExperimenterGroupAnnotationLink>) - Method in class ome.model.meta.ExperimenterGroup
-
use like removeExperimenterGroupAnnotationLink
- removeFilesetAnnotationLink(FilesetAnnotationLink) - Method in class ome.model.fs.Fileset
-
removes a single element from this set and makes the inverse call on ome.model.annotations.FilesetAnnotationLink
- removeFilesetAnnotationLink(FilesetAnnotationLink, boolean) - Method in class ome.model.fs.Fileset
-
removes the given FilesetAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkFileset again if loaded.
- removeFilesetAnnotationLinkSet(Collection<FilesetAnnotationLink>) - Method in class ome.model.fs.Fileset
-
use like removeFilesetAnnotationLink
- removeFilesetEntry(FilesetEntry) - Method in class ome.model.core.OriginalFile
-
removes a single element from this set and makes the inverse call on ome.model.fs.FilesetEntry
- removeFilesetEntry(FilesetEntry) - Method in class ome.model.fs.Fileset
-
removes a single element from this set and makes the inverse call on ome.model.fs.FilesetEntry
- removeFilesetEntrySet(Collection<FilesetEntry>) - Method in class ome.model.core.OriginalFile
-
use like removeFilesetEntry
- removeFilesetEntrySet(Collection<FilesetEntry>) - Method in class ome.model.fs.Fileset
-
use like removeFilesetEntry
- removeFilesetJobLink(FilesetJobLink) - Method in class ome.model.fs.Fileset
-
removes a single element from this set and makes the inverse call on ome.model.fs.FilesetJobLink
- removeFilesetJobLink(FilesetJobLink, boolean) - Method in class ome.model.fs.Fileset
-
removes the given FilesetJobLink from jobLinks, allowing for recursion -- whether
or not the removal will call unlinkFileset again if loaded.
- removeFilesetJobLinkSet(Collection<FilesetJobLink>) - Method in class ome.model.fs.Fileset
-
use like removeFilesetJobLink
- removeFilter(Filter) - Method in class ome.model.acquisition.Instrument
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.Filter
- removeFilterAnnotationLink(FilterAnnotationLink) - Method in class ome.model.acquisition.Filter
-
removes a single element from this set and makes the inverse call on ome.model.annotations.FilterAnnotationLink
- removeFilterAnnotationLink(FilterAnnotationLink, boolean) - Method in class ome.model.acquisition.Filter
-
removes the given FilterAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkFilter again if loaded.
- removeFilterAnnotationLinkSet(Collection<FilterAnnotationLink>) - Method in class ome.model.acquisition.Filter
-
use like removeFilterAnnotationLink
- removeFilterSet(Collection<Filter>) - Method in class ome.model.acquisition.Instrument
-
use like removeFilter
- removeFilterSet(FilterSet) - Method in class ome.model.acquisition.Instrument
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.FilterSet
- removeFilterSetEmissionFilterLink(FilterSetEmissionFilterLink) - Method in class ome.model.acquisition.Filter
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.FilterSetEmissionFilterLink
- removeFilterSetEmissionFilterLink(FilterSetEmissionFilterLink, boolean) - Method in class ome.model.acquisition.Filter
-
removes the given FilterSetEmissionFilterLink from emissionFilterLink, allowing for recursion -- whether
or not the removal will call unlinkFilter again if loaded.
- removeFilterSetEmissionFilterLink(FilterSetEmissionFilterLink) - Method in class ome.model.acquisition.FilterSet
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.FilterSetEmissionFilterLink
- removeFilterSetEmissionFilterLink(FilterSetEmissionFilterLink, boolean) - Method in class ome.model.acquisition.FilterSet
-
removes the given FilterSetEmissionFilterLink from emissionFilterLink, allowing for recursion -- whether
or not the removal will call unlinkFilterSet again if loaded.
- removeFilterSetEmissionFilterLinkSet(Collection<FilterSetEmissionFilterLink>) - Method in class ome.model.acquisition.Filter
-
use like removeFilterSetEmissionFilterLink
- removeFilterSetEmissionFilterLinkSet(Collection<FilterSetEmissionFilterLink>) - Method in class ome.model.acquisition.FilterSet
-
use like removeFilterSetEmissionFilterLink
- removeFilterSetExcitationFilterLink(FilterSetExcitationFilterLink) - Method in class ome.model.acquisition.Filter
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.FilterSetExcitationFilterLink
- removeFilterSetExcitationFilterLink(FilterSetExcitationFilterLink, boolean) - Method in class ome.model.acquisition.Filter
-
removes the given FilterSetExcitationFilterLink from excitationFilterLink, allowing for recursion -- whether
or not the removal will call unlinkFilter again if loaded.
- removeFilterSetExcitationFilterLink(FilterSetExcitationFilterLink) - Method in class ome.model.acquisition.FilterSet
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.FilterSetExcitationFilterLink
- removeFilterSetExcitationFilterLink(FilterSetExcitationFilterLink, boolean) - Method in class ome.model.acquisition.FilterSet
-
removes the given FilterSetExcitationFilterLink from excitationFilterLink, allowing for recursion -- whether
or not the removal will call unlinkFilterSet again if loaded.
- removeFilterSetExcitationFilterLinkSet(Collection<FilterSetExcitationFilterLink>) - Method in class ome.model.acquisition.Filter
-
use like removeFilterSetExcitationFilterLink
- removeFilterSetExcitationFilterLinkSet(Collection<FilterSetExcitationFilterLink>) - Method in class ome.model.acquisition.FilterSet
-
use like removeFilterSetExcitationFilterLink
- removeFilterSetSet(Collection<FilterSet>) - Method in class ome.model.acquisition.Instrument
-
use like removeFilterSet
- removeFolderAnnotationLink(FolderAnnotationLink) - Method in class ome.model.containers.Folder
-
removes a single element from this set and makes the inverse call on ome.model.annotations.FolderAnnotationLink
- removeFolderAnnotationLink(FolderAnnotationLink, boolean) - Method in class ome.model.containers.Folder
-
removes the given FolderAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkFolder again if loaded.
- removeFolderAnnotationLinkSet(Collection<FolderAnnotationLink>) - Method in class ome.model.containers.Folder
-
use like removeFolderAnnotationLink
- removeFolderImageLink(FolderImageLink) - Method in class ome.model.containers.Folder
-
removes a single element from this set and makes the inverse call on ome.model.containers.FolderImageLink
- removeFolderImageLink(FolderImageLink, boolean) - Method in class ome.model.containers.Folder
-
removes the given FolderImageLink from imageLinks, allowing for recursion -- whether
or not the removal will call unlinkFolder again if loaded.
- removeFolderImageLink(FolderImageLink) - Method in class ome.model.core.Image
-
removes a single element from this set and makes the inverse call on ome.model.containers.FolderImageLink
- removeFolderImageLink(FolderImageLink, boolean) - Method in class ome.model.core.Image
-
removes the given FolderImageLink from folderLinks, allowing for recursion -- whether
or not the removal will call unlinkImage again if loaded.
- removeFolderImageLinkSet(Collection<FolderImageLink>) - Method in class ome.model.containers.Folder
-
use like removeFolderImageLink
- removeFolderImageLinkSet(Collection<FolderImageLink>) - Method in class ome.model.core.Image
-
use like removeFolderImageLink
- removeFolderRoiLink(FolderRoiLink) - Method in class ome.model.containers.Folder
-
removes a single element from this set and makes the inverse call on ome.model.containers.FolderRoiLink
- removeFolderRoiLink(FolderRoiLink, boolean) - Method in class ome.model.containers.Folder
-
removes the given FolderRoiLink from roiLinks, allowing for recursion -- whether
or not the removal will call unlinkFolder again if loaded.
- removeFolderRoiLink(FolderRoiLink) - Method in class ome.model.roi.Roi
-
removes a single element from this set and makes the inverse call on ome.model.containers.FolderRoiLink
- removeFolderRoiLink(FolderRoiLink, boolean) - Method in class ome.model.roi.Roi
-
removes the given FolderRoiLink from folderLinks, allowing for recursion -- whether
or not the removal will call unlinkRoi again if loaded.
- removeFolderRoiLinkSet(Collection<FolderRoiLink>) - Method in class ome.model.containers.Folder
-
use like removeFolderRoiLink
- removeFolderRoiLinkSet(Collection<FolderRoiLink>) - Method in class ome.model.roi.Roi
-
use like removeFolderRoiLink
- removeGroupExperimenterMap(GroupExperimenterMap) - Method in class ome.model.meta.Experimenter
-
removes a single element from this set and makes the inverse call on ome.model.meta.GroupExperimenterMap
- removeGroupExperimenterMap(GroupExperimenterMap, boolean) - Method in class ome.model.meta.Experimenter
-
removes the given GroupExperimenterMap from groupExperimenterMap, allowing for recursion -- whether
or not the removal will call unlinkExperimenter again if loaded.
- removeGroupExperimenterMap(GroupExperimenterMap) - Method in class ome.model.meta.ExperimenterGroup
-
removes a single element from this set and makes the inverse call on ome.model.meta.GroupExperimenterMap
- removeGroupExperimenterMap(GroupExperimenterMap, boolean) - Method in class ome.model.meta.ExperimenterGroup
-
removes the given GroupExperimenterMap from groupExperimenterMap, allowing for recursion -- whether
or not the removal will call unlinkExperimenterGroup again if loaded.
- removeGroupExperimenterMapSet(Collection<GroupExperimenterMap>) - Method in class ome.model.meta.Experimenter
-
use like removeGroupExperimenterMap
- removeGroupExperimenterMapSet(Collection<GroupExperimenterMap>) - Method in class ome.model.meta.ExperimenterGroup
-
use like removeGroupExperimenterMap
- removeImage(Image) - Method in class ome.model.fs.Fileset
-
removes a single element from this set and makes the inverse call on ome.model.core.Image
- removeImageAnnotationLink(ImageAnnotationLink) - Method in class ome.model.core.Image
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ImageAnnotationLink
- removeImageAnnotationLink(ImageAnnotationLink, boolean) - Method in class ome.model.core.Image
-
removes the given ImageAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkImage again if loaded.
- removeImageAnnotationLinkSet(Collection<ImageAnnotationLink>) - Method in class ome.model.core.Image
-
use like removeImageAnnotationLink
- removeImageSet(Collection<Image>) - Method in class ome.model.fs.Fileset
-
use like removeImage
- removeInstrumentAnnotationLink(InstrumentAnnotationLink) - Method in class ome.model.acquisition.Instrument
-
removes a single element from this set and makes the inverse call on ome.model.annotations.InstrumentAnnotationLink
- removeInstrumentAnnotationLink(InstrumentAnnotationLink, boolean) - Method in class ome.model.acquisition.Instrument
-
removes the given InstrumentAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkInstrument again if loaded.
- removeInstrumentAnnotationLinkSet(Collection<InstrumentAnnotationLink>) - Method in class ome.model.acquisition.Instrument
-
use like removeInstrumentAnnotationLink
- removeJobOriginalFileLink(JobOriginalFileLink) - Method in class ome.model.jobs.Job
-
removes a single element from this set and makes the inverse call on ome.model.jobs.JobOriginalFileLink
- removeJobOriginalFileLink(JobOriginalFileLink, boolean) - Method in class ome.model.jobs.Job
-
removes the given JobOriginalFileLink from originalFileLinks, allowing for recursion -- whether
or not the removal will call unlinkJob again if loaded.
- removeJobOriginalFileLinkSet(Collection<JobOriginalFileLink>) - Method in class ome.model.jobs.Job
-
use like removeJobOriginalFileLink
- removeLightPathAnnotationLink(LightPathAnnotationLink) - Method in class ome.model.acquisition.LightPath
-
removes a single element from this set and makes the inverse call on ome.model.annotations.LightPathAnnotationLink
- removeLightPathAnnotationLink(LightPathAnnotationLink, boolean) - Method in class ome.model.acquisition.LightPath
-
removes the given LightPathAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkLightPath again if loaded.
- removeLightPathAnnotationLinkSet(Collection<LightPathAnnotationLink>) - Method in class ome.model.acquisition.LightPath
-
use like removeLightPathAnnotationLink
- removeLightPathEmissionFilterLink(LightPathEmissionFilterLink) - Method in class ome.model.acquisition.LightPath
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.LightPathEmissionFilterLink
- removeLightPathEmissionFilterLink(LightPathEmissionFilterLink, boolean) - Method in class ome.model.acquisition.LightPath
-
removes the given LightPathEmissionFilterLink from emissionFilterLink, allowing for recursion -- whether
or not the removal will call unlinkLightPath again if loaded.
- removeLightPathEmissionFilterLinkSet(Collection<LightPathEmissionFilterLink>) - Method in class ome.model.acquisition.LightPath
-
use like removeLightPathEmissionFilterLink
- removeLightPathExcitationFilterLink(LightPathExcitationFilterLink) - Method in class ome.model.acquisition.LightPath
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.LightPathExcitationFilterLink
- removeLightPathExcitationFilterLink(LightPathExcitationFilterLink, boolean) - Method in class ome.model.acquisition.LightPath
-
removes the given LightPathExcitationFilterLink from excitationFilterLink, allowing for recursion -- whether
or not the removal will call unlinkLightPath again if loaded.
- removeLightPathExcitationFilterLinkSet(Collection<LightPathExcitationFilterLink>) - Method in class ome.model.acquisition.LightPath
-
use like removeLightPathExcitationFilterLink
- removeLightSettings(LightSettings) - Method in class ome.model.experiment.MicrobeamManipulation
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.LightSettings
- removeLightSettingsSet(Collection<LightSettings>) - Method in class ome.model.experiment.MicrobeamManipulation
-
use like removeLightSettings
- removeLightSource(LightSource) - Method in class ome.model.acquisition.Instrument
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.LightSource
- removeLightSourceAnnotationLink(LightSourceAnnotationLink) - Method in class ome.model.acquisition.LightSource
-
removes a single element from this set and makes the inverse call on ome.model.annotations.LightSourceAnnotationLink
- removeLightSourceAnnotationLink(LightSourceAnnotationLink, boolean) - Method in class ome.model.acquisition.LightSource
-
removes the given LightSourceAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkLightSource again if loaded.
- removeLightSourceAnnotationLinkSet(Collection<LightSourceAnnotationLink>) - Method in class ome.model.acquisition.LightSource
-
use like removeLightSourceAnnotationLink
- removeLightSourceSet(Collection<LightSource>) - Method in class ome.model.acquisition.Instrument
-
use like removeLightSource
- removeMicrobeamManipulation(MicrobeamManipulation) - Method in class ome.model.experiment.Experiment
-
removes a single element from this set and makes the inverse call on ome.model.experiment.MicrobeamManipulation
- removeMicrobeamManipulationSet(Collection<MicrobeamManipulation>) - Method in class ome.model.experiment.Experiment
-
use like removeMicrobeamManipulation
- removeNamespaceAnnotationLink(NamespaceAnnotationLink) - Method in class ome.model.meta.Namespace
-
removes a single element from this set and makes the inverse call on ome.model.annotations.NamespaceAnnotationLink
- removeNamespaceAnnotationLink(NamespaceAnnotationLink, boolean) - Method in class ome.model.meta.Namespace
-
removes the given NamespaceAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkNamespace again if loaded.
- removeNamespaceAnnotationLinkSet(Collection<NamespaceAnnotationLink>) - Method in class ome.model.meta.Namespace
-
use like removeNamespaceAnnotationLink
- removeNodeAnnotationLink(NodeAnnotationLink) - Method in class ome.model.meta.Node
-
removes a single element from this set and makes the inverse call on ome.model.annotations.NodeAnnotationLink
- removeNodeAnnotationLink(NodeAnnotationLink, boolean) - Method in class ome.model.meta.Node
-
removes the given NodeAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkNode again if loaded.
- removeNodeAnnotationLinkSet(Collection<NodeAnnotationLink>) - Method in class ome.model.meta.Node
-
use like removeNodeAnnotationLink
- removeObjective(Objective) - Method in class ome.model.acquisition.Instrument
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.Objective
- removeObjectiveAnnotationLink(ObjectiveAnnotationLink) - Method in class ome.model.acquisition.Objective
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ObjectiveAnnotationLink
- removeObjectiveAnnotationLink(ObjectiveAnnotationLink, boolean) - Method in class ome.model.acquisition.Objective
-
removes the given ObjectiveAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkObjective again if loaded.
- removeObjectiveAnnotationLinkSet(Collection<ObjectiveAnnotationLink>) - Method in class ome.model.acquisition.Objective
-
use like removeObjectiveAnnotationLink
- removeObjectiveSet(Collection<Objective>) - Method in class ome.model.acquisition.Instrument
-
use like removeObjective
- removeOriginalFileAnnotationLink(OriginalFileAnnotationLink) - Method in class ome.model.core.OriginalFile
-
removes a single element from this set and makes the inverse call on ome.model.annotations.OriginalFileAnnotationLink
- removeOriginalFileAnnotationLink(OriginalFileAnnotationLink, boolean) - Method in class ome.model.core.OriginalFile
-
removes the given OriginalFileAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkOriginalFile again if loaded.
- removeOriginalFileAnnotationLinkSet(Collection<OriginalFileAnnotationLink>) - Method in class ome.model.core.OriginalFile
-
use like removeOriginalFileAnnotationLink
- removeOTF(OTF) - Method in class ome.model.acquisition.Instrument
-
removes a single element from this set and makes the inverse call on ome.model.acquisition.OTF
- removeOTFSet(Collection<OTF>) - Method in class ome.model.acquisition.Instrument
-
use like removeOTF
- removePassword(Long) - Method in class ome.util.actions.PostgresSqlAction
-
- removePassword(Long) - Method in interface ome.util.SqlAction
-
- removePixels(Pixels) - Method in class ome.model.core.Image
-
removes a single element from this set and makes the inverse call on ome.model.core.Pixels
- removePixelsOriginalFileMap(PixelsOriginalFileMap) - Method in class ome.model.core.OriginalFile
-
removes a single element from this set and makes the inverse call on ome.model.core.PixelsOriginalFileMap
- removePixelsOriginalFileMap(PixelsOriginalFileMap, boolean) - Method in class ome.model.core.OriginalFile
-
removes the given PixelsOriginalFileMap from pixelsFileMaps, allowing for recursion -- whether
or not the removal will call unlinkOriginalFile again if loaded.
- removePixelsOriginalFileMap(PixelsOriginalFileMap) - Method in class ome.model.core.Pixels
-
removes a single element from this set and makes the inverse call on ome.model.core.PixelsOriginalFileMap
- removePixelsOriginalFileMap(PixelsOriginalFileMap, boolean) - Method in class ome.model.core.Pixels
-
removes the given PixelsOriginalFileMap from pixelsFileMaps, allowing for recursion -- whether
or not the removal will call unlinkPixels again if loaded.
- removePixelsOriginalFileMapSet(Collection<PixelsOriginalFileMap>) - Method in class ome.model.core.OriginalFile
-
use like removePixelsOriginalFileMap
- removePixelsOriginalFileMapSet(Collection<PixelsOriginalFileMap>) - Method in class ome.model.core.Pixels
-
use like removePixelsOriginalFileMap
- removePixelsSet(Collection<Pixels>) - Method in class ome.model.core.Image
-
use like removePixels
- removePlaneInfo(PlaneInfo) - Method in class ome.model.core.Pixels
-
removes a single element from this set and makes the inverse call on ome.model.core.PlaneInfo
- removePlaneInfoAnnotationLink(PlaneInfoAnnotationLink) - Method in class ome.model.core.PlaneInfo
-
removes a single element from this set and makes the inverse call on ome.model.annotations.PlaneInfoAnnotationLink
- removePlaneInfoAnnotationLink(PlaneInfoAnnotationLink, boolean) - Method in class ome.model.core.PlaneInfo
-
removes the given PlaneInfoAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkPlaneInfo again if loaded.
- removePlaneInfoAnnotationLinkSet(Collection<PlaneInfoAnnotationLink>) - Method in class ome.model.core.PlaneInfo
-
use like removePlaneInfoAnnotationLink
- removePlaneInfoSet(Collection<PlaneInfo>) - Method in class ome.model.core.Pixels
-
use like removePlaneInfo
- removePlateAcquisition(PlateAcquisition) - Method in class ome.model.screen.Plate
-
removes a single element from this set and makes the inverse call on ome.model.screen.PlateAcquisition
- removePlateAcquisitionAnnotationLink(PlateAcquisitionAnnotationLink) - Method in class ome.model.screen.PlateAcquisition
-
removes a single element from this set and makes the inverse call on ome.model.annotations.PlateAcquisitionAnnotationLink
- removePlateAcquisitionAnnotationLink(PlateAcquisitionAnnotationLink, boolean) - Method in class ome.model.screen.PlateAcquisition
-
removes the given PlateAcquisitionAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkPlateAcquisition again if loaded.
- removePlateAcquisitionAnnotationLinkSet(Collection<PlateAcquisitionAnnotationLink>) - Method in class ome.model.screen.PlateAcquisition
-
use like removePlateAcquisitionAnnotationLink
- removePlateAcquisitionSet(Collection<PlateAcquisition>) - Method in class ome.model.screen.Plate
-
use like removePlateAcquisition
- removePlateAnnotationLink(PlateAnnotationLink) - Method in class ome.model.screen.Plate
-
removes a single element from this set and makes the inverse call on ome.model.annotations.PlateAnnotationLink
- removePlateAnnotationLink(PlateAnnotationLink, boolean) - Method in class ome.model.screen.Plate
-
removes the given PlateAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkPlate again if loaded.
- removePlateAnnotationLinkSet(Collection<PlateAnnotationLink>) - Method in class ome.model.screen.Plate
-
use like removePlateAnnotationLink
- removeProjectAnnotationLink(ProjectAnnotationLink) - Method in class ome.model.containers.Project
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ProjectAnnotationLink
- removeProjectAnnotationLink(ProjectAnnotationLink, boolean) - Method in class ome.model.containers.Project
-
removes the given ProjectAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkProject again if loaded.
- removeProjectAnnotationLinkSet(Collection<ProjectAnnotationLink>) - Method in class ome.model.containers.Project
-
use like removeProjectAnnotationLink
- removeProjectDatasetLink(ProjectDatasetLink) - Method in class ome.model.containers.Dataset
-
removes a single element from this set and makes the inverse call on ome.model.containers.ProjectDatasetLink
- removeProjectDatasetLink(ProjectDatasetLink, boolean) - Method in class ome.model.containers.Dataset
-
removes the given ProjectDatasetLink from projectLinks, allowing for recursion -- whether
or not the removal will call unlinkDataset again if loaded.
- removeProjectDatasetLink(ProjectDatasetLink) - Method in class ome.model.containers.Project
-
removes a single element from this set and makes the inverse call on ome.model.containers.ProjectDatasetLink
- removeProjectDatasetLink(ProjectDatasetLink, boolean) - Method in class ome.model.containers.Project
-
removes the given ProjectDatasetLink from datasetLinks, allowing for recursion -- whether
or not the removal will call unlinkProject again if loaded.
- removeProjectDatasetLinkSet(Collection<ProjectDatasetLink>) - Method in class ome.model.containers.Dataset
-
use like removeProjectDatasetLink
- removeProjectDatasetLinkSet(Collection<ProjectDatasetLink>) - Method in class ome.model.containers.Project
-
use like removeProjectDatasetLink
- removeProjectionDef(ProjectionDef) - Method in class ome.model.display.RenderingDef
-
removes a single element from this set and makes the inverse call on ome.model.display.ProjectionDef
- removeProjectionDefSet(Collection<ProjectionDef>) - Method in class ome.model.display.RenderingDef
-
use like removeProjectionDef
- removeReagent(Reagent) - Method in class ome.model.screen.Screen
-
removes a single element from this set and makes the inverse call on ome.model.screen.Reagent
- removeReagentAnnotationLink(ReagentAnnotationLink) - Method in class ome.model.screen.Reagent
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ReagentAnnotationLink
- removeReagentAnnotationLink(ReagentAnnotationLink, boolean) - Method in class ome.model.screen.Reagent
-
removes the given ReagentAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkReagent again if loaded.
- removeReagentAnnotationLinkSet(Collection<ReagentAnnotationLink>) - Method in class ome.model.screen.Reagent
-
use like removeReagentAnnotationLink
- removeReagentSet(Collection<Reagent>) - Method in class ome.model.screen.Screen
-
use like removeReagent
- removeRenderingDef(RenderingDef) - Method in class ome.model.core.Pixels
-
removes a single element from this set and makes the inverse call on ome.model.display.RenderingDef
- removeRenderingDefSet(Collection<RenderingDef>) - Method in class ome.model.core.Pixels
-
use like removeRenderingDef
- removeRoi(Roi) - Method in class ome.model.core.Image
-
removes a single element from this set and makes the inverse call on ome.model.roi.Roi
- removeRoiAnnotationLink(RoiAnnotationLink) - Method in class ome.model.roi.Roi
-
removes a single element from this set and makes the inverse call on ome.model.annotations.RoiAnnotationLink
- removeRoiAnnotationLink(RoiAnnotationLink, boolean) - Method in class ome.model.roi.Roi
-
removes the given RoiAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkRoi again if loaded.
- removeRoiAnnotationLinkSet(Collection<RoiAnnotationLink>) - Method in class ome.model.roi.Roi
-
use like removeRoiAnnotationLink
- removeRoiSet(Collection<Roi>) - Method in class ome.model.core.Image
-
use like removeRoi
- removeScreenAnnotationLink(ScreenAnnotationLink) - Method in class ome.model.screen.Screen
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ScreenAnnotationLink
- removeScreenAnnotationLink(ScreenAnnotationLink, boolean) - Method in class ome.model.screen.Screen
-
removes the given ScreenAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkScreen again if loaded.
- removeScreenAnnotationLinkSet(Collection<ScreenAnnotationLink>) - Method in class ome.model.screen.Screen
-
use like removeScreenAnnotationLink
- removeScreenPlateLink(ScreenPlateLink) - Method in class ome.model.screen.Plate
-
removes a single element from this set and makes the inverse call on ome.model.screen.ScreenPlateLink
- removeScreenPlateLink(ScreenPlateLink, boolean) - Method in class ome.model.screen.Plate
-
removes the given ScreenPlateLink from screenLinks, allowing for recursion -- whether
or not the removal will call unlinkPlate again if loaded.
- removeScreenPlateLink(ScreenPlateLink) - Method in class ome.model.screen.Screen
-
removes a single element from this set and makes the inverse call on ome.model.screen.ScreenPlateLink
- removeScreenPlateLink(ScreenPlateLink, boolean) - Method in class ome.model.screen.Screen
-
removes the given ScreenPlateLink from plateLinks, allowing for recursion -- whether
or not the removal will call unlinkScreen again if loaded.
- removeScreenPlateLinkSet(Collection<ScreenPlateLink>) - Method in class ome.model.screen.Plate
-
use like removeScreenPlateLink
- removeScreenPlateLinkSet(Collection<ScreenPlateLink>) - Method in class ome.model.screen.Screen
-
use like removeScreenPlateLink
- removeSession(Session) - Method in class ome.model.meta.Node
-
removes a single element from this set and makes the inverse call on ome.model.meta.Session
- removeSessionAnnotationLink(SessionAnnotationLink) - Method in class ome.model.meta.Session
-
removes a single element from this set and makes the inverse call on ome.model.annotations.SessionAnnotationLink
- removeSessionAnnotationLink(SessionAnnotationLink, boolean) - Method in class ome.model.meta.Session
-
removes the given SessionAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkSession again if loaded.
- removeSessionAnnotationLinkSet(Collection<SessionAnnotationLink>) - Method in class ome.model.meta.Session
-
use like removeSessionAnnotationLink
- removeSessionSet(Collection<Session>) - Method in class ome.model.meta.Node
-
use like removeSession
- removeShape(Shape) - Method in class ome.model.roi.Roi
-
removes a single element from this set and makes the inverse call on ome.model.roi.Shape
- removeShapeAnnotationLink(ShapeAnnotationLink) - Method in class ome.model.roi.Shape
-
removes a single element from this set and makes the inverse call on ome.model.annotations.ShapeAnnotationLink
- removeShapeAnnotationLink(ShapeAnnotationLink, boolean) - Method in class ome.model.roi.Shape
-
removes the given ShapeAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkShape again if loaded.
- removeShapeAnnotationLinkSet(Collection<ShapeAnnotationLink>) - Method in class ome.model.roi.Shape
-
use like removeShapeAnnotationLink
- removeShapeSet(Collection<Shape>) - Method in class ome.model.roi.Roi
-
use like removeShape
- removeThumbnail(Thumbnail) - Method in class ome.model.core.Pixels
-
removes a single element from this set and makes the inverse call on ome.model.display.Thumbnail
- removeThumbnailSet(Collection<Thumbnail>) - Method in class ome.model.core.Pixels
-
use like removeThumbnail
- removeWell(Well) - Method in class ome.model.screen.Plate
-
removes a single element from this set and makes the inverse call on ome.model.screen.Well
- removeWellAnnotationLink(WellAnnotationLink) - Method in class ome.model.screen.Well
-
removes a single element from this set and makes the inverse call on ome.model.annotations.WellAnnotationLink
- removeWellAnnotationLink(WellAnnotationLink, boolean) - Method in class ome.model.screen.Well
-
removes the given WellAnnotationLink from annotationLinks, allowing for recursion -- whether
or not the removal will call unlinkWell again if loaded.
- removeWellAnnotationLinkSet(Collection<WellAnnotationLink>) - Method in class ome.model.screen.Well
-
use like removeWellAnnotationLink
- removeWellReagentLink(WellReagentLink) - Method in class ome.model.screen.Reagent
-
removes a single element from this set and makes the inverse call on ome.model.screen.WellReagentLink
- removeWellReagentLink(WellReagentLink, boolean) - Method in class ome.model.screen.Reagent
-
removes the given WellReagentLink from wellLinks, allowing for recursion -- whether
or not the removal will call unlinkReagent again if loaded.
- removeWellReagentLink(WellReagentLink) - Method in class ome.model.screen.Well
-
removes a single element from this set and makes the inverse call on ome.model.screen.WellReagentLink
- removeWellReagentLink(WellReagentLink, boolean) - Method in class ome.model.screen.Well
-
removes the given WellReagentLink from reagentLinks, allowing for recursion -- whether
or not the removal will call unlinkWell again if loaded.
- removeWellReagentLinkSet(Collection<WellReagentLink>) - Method in class ome.model.screen.Reagent
-
use like removeWellReagentLink
- removeWellReagentLinkSet(Collection<WellReagentLink>) - Method in class ome.model.screen.Well
-
use like removeWellReagentLink
- removeWellSample(WellSample) - Method in class ome.model.core.Image
-
removes a single element from this set and makes the inverse call on ome.model.screen.WellSample
- removeWellSample(WellSample) - Method in class ome.model.screen.PlateAcquisition
-
removes a single element from this set and makes the inverse call on ome.model.screen.WellSample
- removeWellSample(WellSample) - Method in class ome.model.screen.Well
-
removes a single element from this set and makes the inverse call on ome.model.screen.WellSample
- removeWellSampleSet(Collection<WellSample>) - Method in class ome.model.core.Image
-
use like removeWellSample
- removeWellSampleSet(Collection<WellSample>) - Method in class ome.model.screen.PlateAcquisition
-
use like removeWellSample
- removeWellSampleSet(Collection<WellSample>) - Method in class ome.model.screen.Well
-
use like removeWellSample
- removeWellSet(Collection<Well>) - Method in class ome.model.screen.Plate
-
use like removeWell
- renderingDef - Variable in class ome.model.display.ChannelBinding
-
- RENDERINGDEF - Static variable in class ome.model.display.ChannelBinding
-
- renderingDef - Variable in class ome.model.display.ProjectionDef
-
- RENDERINGDEF - Static variable in class ome.model.display.ProjectionDef
-
- RenderingDef - Class in ome.model.display
-
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
- RenderingDef() - Constructor for class ome.model.display.RenderingDef
-
- RenderingDef(Long) - Constructor for class ome.model.display.RenderingDef
-
- RenderingDef(Long, boolean) - Constructor for class ome.model.display.RenderingDef
-
Main constructor.
- RenderingDef(Pixels, Integer, Integer, RenderingModel, QuantumDef) - Constructor for class ome.model.display.RenderingDef
-
- RenderingDef.Details - Class in ome.model.display
-
- RenderingModel - Class in ome.model.enums
-
- RenderingModel() - Constructor for class ome.model.enums.RenderingModel
-
- RenderingModel(Long) - Constructor for class ome.model.enums.RenderingModel
-
- RenderingModel(Long, boolean) - Constructor for class ome.model.enums.RenderingModel
-
Main constructor.
- RenderingModel(String) - Constructor for class ome.model.enums.RenderingModel
-
- RenderingModel.Details - Class in ome.model.enums
-
- repetitionRate - Variable in class ome.model.acquisition.Laser
-
- REPETITIONRATE - Static variable in class ome.model.acquisition.Laser
-
- replace(Object, Object, Object) - Method in class ome.model.units.GenericEnumType
-
- repo - Variable in class ome.model.core.OriginalFile
-
- REPO - Static variable in class ome.model.core.OriginalFile
-
- repo - Variable in class ome.util.SqlAction.DeleteLog
-
- repoFile(long) - Method in class ome.util.actions.PostgresSqlAction
-
- repoFile(long) - Method in interface ome.util.SqlAction
-
- repoScriptCount(String, Set<String>) - Method in class ome.util.SqlAction.Impl
-
- repoScriptCount(String, Set<String>) - Method in interface ome.util.SqlAction
-
- reset() - Method in class ome.util.Counter
-
Reset this counter to zero.
- ResourceError - Exception in ome.conditions
-
Represents a incorrectible/unforseeable event within the server that lead to
a failure of a process.
- ResourceError(String) - Constructor for exception ome.conditions.ResourceError
-
- result - Variable in exception ome.model.units.BigResult
-
- retrieve(String) - Method in class ome.model.acquisition.Arc
-
- retrieve(String) - Method in class ome.model.acquisition.Detector
-
- retrieve(String) - Method in class ome.model.acquisition.DetectorSettings
-
- retrieve(String) - Method in class ome.model.acquisition.Dichroic
-
- retrieve(String) - Method in class ome.model.acquisition.Filament
-
- retrieve(String) - Method in class ome.model.acquisition.Filter
-
- retrieve(String) - Method in class ome.model.acquisition.FilterSet
-
- retrieve(String) - Method in class ome.model.acquisition.FilterSetEmissionFilterLink
-
- retrieve(String) - Method in class ome.model.acquisition.FilterSetExcitationFilterLink
-
- retrieve(String) - Method in class ome.model.acquisition.GenericExcitationSource
-
- retrieve(String) - Method in class ome.model.acquisition.ImagingEnvironment
-
- retrieve(String) - Method in class ome.model.acquisition.Instrument
-
- retrieve(String) - Method in class ome.model.acquisition.Laser
-
- retrieve(String) - Method in class ome.model.acquisition.LightEmittingDiode
-
- retrieve(String) - Method in class ome.model.acquisition.LightPath
-
- retrieve(String) - Method in class ome.model.acquisition.LightPathEmissionFilterLink
-
- retrieve(String) - Method in class ome.model.acquisition.LightPathExcitationFilterLink
-
- retrieve(String) - Method in class ome.model.acquisition.LightSettings
-
- retrieve(String) - Method in class ome.model.acquisition.LightSource
-
- retrieve(String) - Method in class ome.model.acquisition.Microscope
-
- retrieve(String) - Method in class ome.model.acquisition.Objective
-
- retrieve(String) - Method in class ome.model.acquisition.ObjectiveSettings
-
- retrieve(String) - Method in class ome.model.acquisition.OTF
-
- retrieve(String) - Method in class ome.model.acquisition.StageLabel
-
- retrieve(String) - Method in class ome.model.acquisition.TransmittanceRange
-
- retrieve(String) - Method in class ome.model.annotations.Annotation
-
- retrieve(String) - Method in class ome.model.annotations.AnnotationAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.BasicAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.BooleanAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.ChannelAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.CommentAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.DatasetAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.DetectorAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.DichroicAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.DoubleAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.ExperimenterAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.ExperimenterGroupAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.FileAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.FilesetAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.FilterAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.FolderAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.ImageAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.InstrumentAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.LightPathAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.LightSourceAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.ListAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.LongAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.MapAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.NamespaceAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.NodeAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.NumericAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.ObjectiveAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.OriginalFileAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.PlaneInfoAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.PlateAcquisitionAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.PlateAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.ProjectAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.ReagentAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.RoiAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.ScreenAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.SessionAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.ShapeAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.TagAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.TermAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.TextAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.TimestampAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.TypeAnnotation
-
- retrieve(String) - Method in class ome.model.annotations.WellAnnotationLink
-
- retrieve(String) - Method in class ome.model.annotations.XmlAnnotation
-
- retrieve(String) - Method in class ome.model.containers.Dataset
-
- retrieve(String) - Method in class ome.model.containers.DatasetImageLink
-
- retrieve(String) - Method in class ome.model.containers.Folder
-
- retrieve(String) - Method in class ome.model.containers.FolderImageLink
-
- retrieve(String) - Method in class ome.model.containers.FolderRoiLink
-
- retrieve(String) - Method in class ome.model.containers.Project
-
- retrieve(String) - Method in class ome.model.containers.ProjectDatasetLink
-
- retrieve(String) - Method in class ome.model.core.Channel
-
- retrieve(String) - Method in class ome.model.core.Image
-
- retrieve(String) - Method in class ome.model.core.LogicalChannel
-
- retrieve(String) - Method in class ome.model.core.OriginalFile
-
- retrieve(String) - Method in class ome.model.core.Pixels
-
- retrieve(String) - Method in class ome.model.core.PixelsOriginalFileMap
-
- retrieve(String) - Method in class ome.model.core.PlaneInfo
-
- retrieve(String) - Method in class ome.model.display.ChannelBinding
-
- retrieve(String) - Method in class ome.model.display.CodomainMapContext
-
- retrieve(String) - Method in class ome.model.display.ContrastStretchingContext
-
- retrieve(String) - Method in class ome.model.display.PlaneSlicingContext
-
- retrieve(String) - Method in class ome.model.display.ProjectionDef
-
- retrieve(String) - Method in class ome.model.display.QuantumDef
-
- retrieve(String) - Method in class ome.model.display.RenderingDef
-
- retrieve(String) - Method in class ome.model.display.ReverseIntensityContext
-
- retrieve(String) - Method in class ome.model.display.Thumbnail
-
- retrieve(String) - Method in class ome.model.enums.AcquisitionMode
-
- retrieve(String) - Method in class ome.model.enums.AdminPrivilege
-
- retrieve(String) - Method in class ome.model.enums.ArcType
-
- retrieve(String) - Method in class ome.model.enums.Binning
-
- retrieve(String) - Method in class ome.model.enums.ChecksumAlgorithm
-
- retrieve(String) - Method in class ome.model.enums.ContrastMethod
-
- retrieve(String) - Method in class ome.model.enums.Correction
-
- retrieve(String) - Method in class ome.model.enums.DetectorType
-
- retrieve(String) - Method in class ome.model.enums.DimensionOrder
-
- retrieve(String) - Method in class ome.model.enums.EventType
-
- retrieve(String) - Method in class ome.model.enums.ExperimentType
-
- retrieve(String) - Method in class ome.model.enums.Family
-
- retrieve(String) - Method in class ome.model.enums.FilamentType
-
- retrieve(String) - Method in class ome.model.enums.FilterType
-
- retrieve(String) - Method in class ome.model.enums.Format
-
- retrieve(String) - Method in class ome.model.enums.Illumination
-
- retrieve(String) - Method in class ome.model.enums.Immersion
-
- retrieve(String) - Method in class ome.model.enums.LaserMedium
-
- retrieve(String) - Method in class ome.model.enums.LaserType
-
- retrieve(String) - Method in class ome.model.enums.Medium
-
- retrieve(String) - Method in class ome.model.enums.MicrobeamManipulationType
-
- retrieve(String) - Method in class ome.model.enums.MicroscopeType
-
- retrieve(String) - Method in class ome.model.enums.PhotometricInterpretation
-
- retrieve(String) - Method in class ome.model.enums.PixelsType
-
- retrieve(String) - Method in class ome.model.enums.ProjectionAxis
-
- retrieve(String) - Method in class ome.model.enums.ProjectionType
-
- retrieve(String) - Method in class ome.model.enums.Pulse
-
- retrieve(String) - Method in class ome.model.enums.RenderingModel
-
- retrieve(String) - Method in class ome.model.experiment.Experiment
-
- retrieve(String) - Method in class ome.model.experiment.MicrobeamManipulation
-
- retrieve(String) - Method in class ome.model.fs.Fileset
-
- retrieve(String) - Method in class ome.model.fs.FilesetEntry
-
- retrieve(String) - Method in class ome.model.fs.FilesetJobLink
-
- retrieve(String) - Method in class ome.model.internal.Details
-
- retrieve(String) - Method in class ome.model.internal.Link
-
- retrieve(String) - Method in interface ome.model.IObject
-
retrieves a value from this instance.
- retrieve(String) - Method in class ome.model.jobs.ImportJob
-
Deprecated.
- retrieve(String) - Method in class ome.model.jobs.IndexingJob
-
- retrieve(String) - Method in class ome.model.jobs.IntegrityCheckJob
-
- retrieve(String) - Method in class ome.model.jobs.Job
-
- retrieve(String) - Method in class ome.model.jobs.JobOriginalFileLink
-
- retrieve(String) - Method in class ome.model.jobs.JobStatus
-
- retrieve(String) - Method in class ome.model.jobs.MetadataImportJob
-
- retrieve(String) - Method in class ome.model.jobs.ParseJob
-
- retrieve(String) - Method in class ome.model.jobs.PixelDataJob
-
- retrieve(String) - Method in class ome.model.jobs.ScriptJob
-
- retrieve(String) - Method in class ome.model.jobs.ThumbnailGenerationJob
-
- retrieve(String) - Method in class ome.model.jobs.UploadJob
-
- retrieve(String) - Method in class ome.model.meta.DBPatch
-
- retrieve(String) - Method in class ome.model.meta.Event
-
- retrieve(String) - Method in class ome.model.meta.EventLog
-
- retrieve(String) - Method in class ome.model.meta.Experimenter
-
- retrieve(String) - Method in class ome.model.meta.ExperimenterGroup
-
- retrieve(String) - Method in class ome.model.meta.ExternalInfo
-
- retrieve(String) - Method in class ome.model.meta.GroupExperimenterMap
-
- retrieve(String) - Method in class ome.model.meta.Namespace
-
- retrieve(String) - Method in class ome.model.meta.Node
-
- retrieve(String) - Method in class ome.model.meta.Session
-
- retrieve(String) - Method in class ome.model.meta.Share
-
- retrieve(String) - Method in class ome.model.meta.ShareMember
-
- retrieve(String) - Method in class ome.model.roi.AffineTransform
-
- retrieve(String) - Method in class ome.model.roi.Ellipse
-
- retrieve(String) - Method in class ome.model.roi.Label
-
- retrieve(String) - Method in class ome.model.roi.Line
-
- retrieve(String) - Method in class ome.model.roi.Mask
-
- retrieve(String) - Method in class ome.model.roi.Path
-
Deprecated.
- retrieve(String) - Method in class ome.model.roi.Point
-
- retrieve(String) - Method in class ome.model.roi.Polygon
-
- retrieve(String) - Method in class ome.model.roi.Polyline
-
- retrieve(String) - Method in class ome.model.roi.Rectangle
-
- retrieve(String) - Method in class ome.model.roi.Roi
-
- retrieve(String) - Method in class ome.model.roi.Shape
-
- retrieve(String) - Method in class ome.model.screen.Plate
-
- retrieve(String) - Method in class ome.model.screen.PlateAcquisition
-
- retrieve(String) - Method in class ome.model.screen.Reagent
-
- retrieve(String) - Method in class ome.model.screen.Screen
-
- retrieve(String) - Method in class ome.model.screen.ScreenPlateLink
-
- retrieve(String) - Method in class ome.model.screen.Well
-
- retrieve(String) - Method in class ome.model.screen.WellReagentLink
-
- retrieve(String) - Method in class ome.model.screen.WellSample
-
- retrieve(String) - Method in class ome.model.stats.StatsInfo
-
- retrieve(String) - Method in class ome.util.PermDetails
-
- returnedClass() - Method in class ome.model.units.GenericEnumType
-
- reverse - Variable in class ome.model.display.ReverseIntensityContext
-
- REVERSE - Static variable in class ome.model.display.ReverseIntensityContext
-
- reverse(ModelBased) - Method in interface ome.util.ReverseModelMapper
-
- reverse(Collection) - Method in interface ome.util.ReverseModelMapper
-
- ReverseIntensityContext - Class in ome.model.display
-
- ReverseIntensityContext() - Constructor for class ome.model.display.ReverseIntensityContext
-
- ReverseIntensityContext(Long) - Constructor for class ome.model.display.ReverseIntensityContext
-
- ReverseIntensityContext(Long, boolean) - Constructor for class ome.model.display.ReverseIntensityContext
-
Main constructor.
- ReverseIntensityContext(Boolean) - Constructor for class ome.model.display.ReverseIntensityContext
-
- ReverseModelMapper - Interface in ome.util
-
- revoke(Permissions.Role, Permissions.Right...) - Method in class ome.model.internal.Permissions
-
- revokeAll(Permissions) - Method in class ome.model.internal.Permissions
-
takes a permissions instance and ANDs it with the current instance.
- rewriteHql(String, String, Object) - Method in class ome.util.actions.PostgresSqlAction
-
The temp_ids infrastructure was never properly put
in place for the "psql" profile.
- rewriteHql(String, String, Object) - Method in class ome.util.SqlAction.Impl
-
- rewriteHql(String, String, Object) - Method in interface ome.util.SqlAction
-
Allows the specific database implementations a chance to modify
queries.
- Roi - Class in ome.model.roi
-
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
- Roi() - Constructor for class ome.model.roi.Roi
-
- Roi(Long) - Constructor for class ome.model.roi.Roi
-
- Roi(Long, boolean) - Constructor for class ome.model.roi.Roi
-
Main constructor.
- roi - Variable in class ome.model.roi.Shape
-
- ROI - Static variable in class ome.model.roi.Shape
-
- Roi.Details - Class in ome.model.roi
-
- RoiAnnotationLink - Class in ome.model.annotations
-
These filter definitions are used by the security system
to eliminate non-readable objects from queries.
- RoiAnnotationLink() - Constructor for class ome.model.annotations.RoiAnnotationLink
-
- RoiAnnotationLink(Long) - Constructor for class ome.model.annotations.RoiAnnotationLink
-
- RoiAnnotationLink(Long, boolean) - Constructor for class ome.model.annotations.RoiAnnotationLink
-
Main constructor.
- RoiAnnotationLink(IObject, IObject) - Constructor for class ome.model.annotations.RoiAnnotationLink
-
- RoiAnnotationLink.Details - Class in ome.model.annotations
-
- roiByImage(long) - Method in class ome.util.actions.PostgresSqlAction
-
- roiByImage(long) - Method in interface ome.util.SqlAction
-
- roiLinks - Variable in class ome.model.containers.Folder
-
- ROILINKS - Static variable in class ome.model.containers.Folder
-
- ROILINKSCOUNTPEROWNER - Static variable in class ome.model.containers.Folder
-
- rois - Variable in class ome.model.core.Image
-
- ROIS - Static variable in class ome.model.core.Image
-
- rollbackSavepoint(String) - Method in class ome.util.actions.PostgresSqlAction
-
- rollbackSavepoint(String) - Method in interface ome.util.SqlAction
-
- RootException - Exception in ome.conditions
-
abstract superclass of all Omero exceptions.
- RootException(String) - Constructor for exception ome.conditions.RootException
-
- row - Variable in class ome.model.screen.Well
-
- ROW - Static variable in class ome.model.screen.Well
-
- rowNamingConvention - Variable in class ome.model.screen.Plate
-
- ROWNAMINGCONVENTION - Static variable in class ome.model.screen.Plate
-
- rows - Variable in class ome.model.screen.Plate
-
- ROWS - Static variable in class ome.model.screen.Plate
-