Package ome.services.blitz.impl

Class ProjectionI

java.lang.Object

ome.services.blitz.impl.AbstractAmdServant

ome.services.blitz.impl.ProjectionI

All Implemented Interfaces:

BlitzOnly, _IProjectionOperations, _ServiceInterfaceOperations, org.springframework.beans.factory.Aware, org.springframework.context.ApplicationContextAware

public class ProjectionI
extends AbstractAmdServant
implements _IProjectionOperations, BlitzOnly

Implementation of the IProjection service.

Since:

3.0-Beta4

See Also:

IProjection

Field Summary

Fields inherited from class ome.services.blitz.impl.AbstractAmdServant

be, ctx, holder, invoker, log, service

Constructor Summary

Constructors

Constructor	Description
ProjectionI(ome.api.ServiceInterface service, BlitzExecutor be)

Method Summary

Modifier and Type	Method	Description
void	projectPixels_async(AMD_IProjection_projectPixels __cb, long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channelList, int stepping, int zStart, int zEnd, java.lang.String name, Ice.Current __current)	Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set.
void	projectStack_async(AMD_IProjection_projectStack __cb, long pixelsId, PixelsType pixelsType, ProjectionType algorithm, int timepoint, int channelIndex, int stepping, int start, int end, Ice.Current __current)	Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.

Methods inherited from class ome.services.blitz.impl.AbstractAmdServant

activate_async, applyHardWiredInterceptors, callInvokerOnMappedArgs, callInvokerOnRawArgs, executorWorkCall, getCurrentEventContext_async, onSetOmeroContext, passivate_async, runnableCall, safeRunnableCall, setApplicationContext, setHolder

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ProjectionI

public ProjectionI(ome.api.ServiceInterface service,
                   BlitzExecutor be)

Method Detail

projectPixels_async

public void projectPixels_async(AMD_IProjection_projectPixels __cb,
                                long pixelsId,
                                PixelsType pixelsType,
                                ProjectionType algorithm,
                                int tStart,
                                int tEnd,
                                java.util.List<java.lang.Integer> channelList,
                                int stepping,
                                int zStart,
                                int zEnd,
                                java.lang.String name,
                                Ice.Current __current)
                         throws ServerError

Description copied from interface: _IProjectionOperations

Performs a projection through selected optical sections and optical sections for a given set of time points of a Pixels set. The Image which is linked to the Pixels set will be copied using omero.api.IPixels.copyAndResizeImage.

Specified by:

projectPixels_async in interface _IProjectionOperations

Parameters:

__cb - The callback object for the operation.

pixelsId - The source Pixels set Id.

algorithm - MAXIMUM_INTENSITY, MEAN_INTENSITY or SUM_INTENSITY. NOTE: When performing a SUM_INTENSITY projection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.

tStart - Timepoint to start projecting from.

channelList - List of the channel indexes to use while calculating the projection.

stepping - Stepping value to use while calculating the projection. For example, stepping=1 will use every optical section from start to end where stepping=2 will use every other section from start to end to perform the projection.

zStart - Optical section to start projecting from.

name - Name for the newly created image. If null the name of the Image linked to the Pixels qualified by pixelsId will be used with a Projection suffix. For example, GFP-H2B Image of HeLa Cells will have an Image name of GFP-H2B Image of HeLa Cells Projection used for the projection.

__current - The Current object for the invocation.

Throws:

ServerError

projectStack_async

public void projectStack_async(AMD_IProjection_projectStack __cb,
                               long pixelsId,
                               PixelsType pixelsType,
                               ProjectionType algorithm,
                               int timepoint,
                               int channelIndex,
                               int stepping,
                               int start,
                               int end,
                               Ice.Current __current)
                        throws ServerError

Description copied from interface: _IProjectionOperations

Performs a projection through the optical sections of a particular wavelength at a given time point of a Pixels set.

Specified by:

projectStack_async in interface _IProjectionOperations

Parameters:

__cb - The callback object for the operation.

pixelsId - The source Pixels set Id.

algorithm - MAXIMUM_INTENSITY, MEAN_INTENSITY or SUM_INTENSITY. NOTE: When performing a SUM_INTENSITY projection, pixel values will be pinned to the maximum pixel value of the destination Pixels type.

timepoint - Timepoint to perform the projection.

stepping - Stepping value to use while calculating the projection. For example, stepping=1 will use every optical section from start to end where stepping=2 will use every other section from start to end to perform the projection.

start - Optical section to start projecting from.

__current - The Current object for the invocation.

Throws:

ServerError