| Interface | Description |
|---|---|
| _ClusterNodeOperations |
Interface implemented by each server instance.
|
| _ClusterNodeOperationsNC |
Interface implemented by each server instance.
|
| _ImportProcessOperations |
User configuration options.
|
| _ImportProcessOperationsNC |
User configuration options.
|
| _InteractiveProcessorOperations |
Client facing interface to the background processing
framework.
|
| _InteractiveProcessorOperationsNC |
Client facing interface to the background processing
framework.
|
| _InternalRepositoryOperations |
Internal portion of the API used for management.
|
| _InternalRepositoryOperationsNC |
Internal portion of the API used for management.
|
| _ManagedRepositoryOperations |
FS-enabled repository which can convert uploaded files
into Images by using Bio-Formats to import them.
|
| _ManagedRepositoryOperationsNC |
FS-enabled repository which can convert uploaded files
into Images by using Bio-Formats to import them.
|
| _ProcessCallbackOperations |
Callback which can be attached to a Process
with notification of any of the possible
ends-of-life that a Process might experience
|
| _ProcessCallbackOperationsNC |
Callback which can be attached to a Process
with notification of any of the possible
ends-of-life that a Process might experience
|
| _ProcessOperations |
Thin wrapper around a system-level process.
|
| _ProcessOperationsNC |
Thin wrapper around a system-level process.
|
| _ProcessorCallbackOperations |
Internal callback interface which is passed to the
Processor.accepts method
to query whether or not a processor will accept a certain operation. |
| _ProcessorCallbackOperationsNC |
Internal callback interface which is passed to the
Processor.accepts method
to query whether or not a processor will accept a certain operation. |
| _ProcessorOperations |
Simple controller for Processes.
|
| _ProcessorOperationsNC |
Simple controller for Processes.
|
| _RepositoryOperations |
Client-accessible interface representing a single mount point on the server-side.
|
| _RepositoryOperationsNC |
Client-accessible interface representing a single mount point on the server-side.
|
| _ScriptProcessOperations | |
| _ScriptProcessOperationsNC | |
| _SharedResourcesOperations |
Resource manager provided by each Blitz session for acquiring
shared resources in the OmeroGrid.
|
| _SharedResourcesOperationsNC |
Resource manager provided by each Blitz session for acquiring
shared resources in the OmeroGrid.
|
| _TableOperations | |
| _TableOperationsNC | |
| _TablesOperations | |
| _TablesOperationsNC | |
| BoolColumnPrx | |
| ClusterNode |
Interface implemented by each server instance.
|
| ClusterNodePrx |
Interface implemented by each server instance.
|
| ColumnPrx |
Base type for dealing working with tabular data.
|
| DataPrx | |
| DatasetColumnPrx | |
| DoubleArrayColumnPrx | |
| DoubleColumnPrx | |
| FileColumnPrx | |
| FloatArrayColumnPrx | |
| ImageColumnPrx | |
| ImportLocationPrx |
Returned by
ManagedRepository.importFileset with
the information needed to proceed with an FS import. |
| ImportProcess |
User configuration options.
|
| ImportProcessPrx |
User configuration options.
|
| ImportRequestPrx |
Command object which will be used to create
the
Handle instances passed
back by the ImportProcess. |
| ImportResponsePrx |
Successful response returned from execution
of
ImportRequest. |
| ImportSettingsPrx |
User configuration options.
|
| InteractiveProcessor |
Client facing interface to the background processing
framework.
|
| InteractiveProcessorPrx |
Client facing interface to the background processing
framework.
|
| InternalRepository |
Internal portion of the API used for management.
|
| InternalRepositoryPrx |
Internal portion of the API used for management.
|
| JobParamsPrx |
Complete job description with all input and output Params.
|
| LongArrayColumnPrx | |
| LongColumnPrx | |
| ManagedRepository |
FS-enabled repository which can convert uploaded files
into Images by using Bio-Formats to import them.
|
| ManagedRepositoryPrx |
FS-enabled repository which can convert uploaded files
into Images by using Bio-Formats to import them.
|
| MaskColumnPrx |
Column requiring special handling.
|
| ParamPrx |
A single parameter to a Job.
|
| ParamsHelper.Acquirer |
Interface added in order to allow ParamHelper instances to use methods
from SharedResourcesI.
|
| PlateColumnPrx | |
| Process |
Thin wrapper around a system-level process.
|
| ProcessCallback |
Callback which can be attached to a Process
with notification of any of the possible
ends-of-life that a Process might experience
|
| ProcessCallbackPrx |
Callback which can be attached to a Process
with notification of any of the possible
ends-of-life that a Process might experience
|
| Processor |
Simple controller for Processes.
|
| ProcessorCallback |
Internal callback interface which is passed to the
Processor.accepts method
to query whether or not a processor will accept a certain operation. |
| ProcessorCallbackPrx |
Internal callback interface which is passed to the
Processor.accepts method
to query whether or not a processor will accept a certain operation. |
| ProcessorPrx |
Simple controller for Processes.
|
| ProcessPrx |
Thin wrapper around a system-level process.
|
| RawAccessRequestPrx | Deprecated
Not intended for use by production clients.
|
| Repository |
Client-accessible interface representing a single mount point on the server-side.
|
| RepositoryPrx |
Client-accessible interface representing a single mount point on the server-side.
|
| RoiColumnPrx | |
| ScriptProcess | |
| ScriptProcessPrx | |
| SharedResources |
Resource manager provided by each Blitz session for acquiring
shared resources in the OmeroGrid.
|
| SharedResourcesPrx |
Resource manager provided by each Blitz session for acquiring
shared resources in the OmeroGrid.
|
| StringColumnPrx | |
| Table | |
| TablePrx | |
| Tables | |
| TablesPrx | |
| WellColumnPrx |
| Class | Description |
|---|---|
| _ClusterNodeDisp |
Interface implemented by each server instance.
|
| _ClusterNodeTie | |
| _ImportProcessDisp |
User configuration options.
|
| _ImportProcessTie | |
| _InteractiveProcessorDisp |
Client facing interface to the background processing
framework.
|
| _InteractiveProcessorTie | |
| _InternalRepositoryDisp |
Internal portion of the API used for management.
|
| _InternalRepositoryTie | |
| _ManagedRepositoryDisp |
FS-enabled repository which can convert uploaded files
into Images by using Bio-Formats to import them.
|
| _ManagedRepositoryTie | |
| _ProcessCallbackDisp |
Callback which can be attached to a Process
with notification of any of the possible
ends-of-life that a Process might experience
|
| _ProcessCallbackTie | |
| _ProcessDisp |
Thin wrapper around a system-level process.
|
| _ProcessorCallbackDisp |
Internal callback interface which is passed to the
Processor.accepts method
to query whether or not a processor will accept a certain operation. |
| _ProcessorCallbackTie | |
| _ProcessorDisp |
Simple controller for Processes.
|
| _ProcessorTie | |
| _ProcessTie | |
| _RepositoryDisp |
Client-accessible interface representing a single mount point on the server-side.
|
| _RepositoryTie | |
| _ScriptProcessDisp | |
| _ScriptProcessTie | |
| _SharedResourcesDisp |
Resource manager provided by each Blitz session for acquiring
shared resources in the OmeroGrid.
|
| _SharedResourcesTie | |
| _TableDisp | |
| _TablesDisp | |
| _TablesTie | |
| _TableTie | |
| BoolColumn | |
| BoolColumnHolder | |
| BoolColumnPrxHelper |
Provides type-specific helper functions.
|
| BoolColumnPrxHolder | |
| Callback_ClusterNode_down |
Let all cluster nodes know that the instance with this
uuid is going down.
|
| Callback_ClusterNode_getNodeUuid |
Each node acquires the uuids of all other active nodes on start
up.
|
| Callback_ImportProcess_getHandle |
Reacquire the handle which was returned by
verifyUpload. |
| Callback_ImportProcess_getImportSettings | |
| Callback_ImportProcess_getUploader |
Step 1: Returns a RawFileStore that can be used to upload one of
the used files.
|
| Callback_ImportProcess_getUploadOffset |
In case an upload must be resumed, this provides the
location of the last successful upload.
|
| Callback_ImportProcess_verifyUpload |
Step 2: Passes a set of client-side calculated hashes to the
server for verifying that all of the files were correctly
uploaded.
|
| Callback_InteractiveProcessor_execute |
Executes an instance of the job returned by getJob() using
the given map as inputs.
|
| Callback_InteractiveProcessor_expires |
Returns the system clock time in milliseconds since the epoch
at which this processor will be reaped.
|
| Callback_InteractiveProcessor_getJob |
Returns the job which defines this processor.
|
| Callback_InteractiveProcessor_getResults |
Retrieve the results for the given process.
|
| Callback_InteractiveProcessor_params |
Retrieves the parameters needed to be passed in an execution
and the results which will be passed back out.
|
| Callback_InteractiveProcessor_setDetach |
Sets whether or not cancel will be called on the current
Process on stop. |
| Callback_InteractiveProcessor_stop |
Clears the current execution of
Job from
the processor to prepare for another execution. |
| Callback_InternalRepository_createRawFileStore | |
| Callback_InternalRepository_createRawPixelsStore | |
| Callback_InternalRepository_createRenderingEngine | |
| Callback_InternalRepository_createThumbnailStore | |
| Callback_InternalRepository_getDescription | |
| Callback_InternalRepository_getFilePath | |
| Callback_InternalRepository_getProxy | |
| Callback_InternalRepository_rawAccess | |
| Callback_ManagedRepository_importFileset |
Returns an
ImportProcess which can be used to upload files. |
| Callback_ManagedRepository_importPaths |
For clients without access to Bio-Formats, the simplified
importPaths method allows passing solely the absolute
path of the files to be uploaded (no directories) and all
configuration happens server-side. |
| Callback_ManagedRepository_listChecksumAlgorithms |
Return the list of checksum algorithms supported by this repository
for verifying the integrity of uploaded files.
|
| Callback_ManagedRepository_listImports |
List imports that are currently running in this importer.
|
| Callback_ManagedRepository_setChecksumAlgorithm |
Set the checksum algorithm for the original files identified
by the given IDs and calculate their checksum accordingly.
|
| Callback_ManagedRepository_suggestChecksumAlgorithm |
Suggest a checksum algorithm to use for
ImportSettings.checksumAlgorithm according to the
preferences set by the server administrator. |
| Callback_ManagedRepository_verifyChecksums |
Verify the checksum for the original files identified by
the given IDs.
|
| Callback_Process_cancel |
Signal to the Process that it should terminate.
|
| Callback_Process_kill |
Terminate the Process immediately.
|
| Callback_Process_poll |
Returns the return code of the process, or null
if unfinished.
|
| Callback_Process_registerCallback |
Add a callback for end-of-life events
|
| Callback_Process_shutdown |
First attempts cancel() several times and finally
resorts to kill to force the process to shutdown
cleanly.
|
| Callback_Process_unregisterCallback |
Remove a callback for end-of-life events
|
| Callback_Process_wait |
Blocks until poll() would return a non-null return code.
|
| Callback_ProcessCallback_processCancelled |
cancel() was called on this Process.
|
| Callback_ProcessCallback_processFinished |
Process terminated normally.
|
| Callback_ProcessCallback_processKilled |
kill() was called on this Process.
|
| Callback_Processor_parseJob |
Parses a job and returns metadata definition required
for properly submitting the job.
|
| Callback_Processor_processJob |
Starts a process based on the given job
If this processor cannot handle the given job, a
null process will be returned.
|
| Callback_Processor_requestRunning |
Used by servers to find out what jobs are still active.
|
| Callback_Processor_willAccept |
Called by
SharedResources to find a suitable
target for omero.grid.SharedResources.acquireProcessor. |
| Callback_ProcessorCallback_isAccepted | |
| Callback_ProcessorCallback_isProxyAccepted | |
| Callback_ProcessorCallback_responseRunning | |
| Callback_Repository_deletePaths |
Delete several individual paths.
|
| Callback_Repository_file |
Returns a special RawFileStore which permits only the operations
set out in the options string ""wb"", ""a+"", etc.
|
| Callback_Repository_fileById | |
| Callback_Repository_fileExists |
Returns true if the file or path exists within the repository.
|
| Callback_Repository_list |
Returns a set of strings naming the files and directories in
the directory denoted by an abstract pathname.
|
| Callback_Repository_listFiles |
Returns an array of abstract pathname objects denoting the
files in the directory denoted by an abstract pathname.
|
| Callback_Repository_makeDir |
Create a directory at the given path.
|
| Callback_Repository_mimetype |
Returns the best-guess mimetype for the given path.
|
| Callback_Repository_register |
Create an OriginalFile in the database for the given path.
|
| Callback_Repository_root |
Return the OriginalFile descriptor for this Repository.
|
| Callback_Repository_treeList |
Similar to
list but recursive and returns only
primitive values for the file at each location. |
| Callback_ScriptProcess_close |
Closes this process and frees server resources attached to it.
|
| Callback_ScriptProcess_getJob |
Returns the job which started this process.
|
| Callback_ScriptProcess_getResults |
Returns the results immediately if present.
|
| Callback_ScriptProcess_setMessage |
Sets the message on the
ScriptJob object. |
| Callback_SharedResources_acquireProcessor |
Waits up to seconds to acquire a slot in a processor
which can handle the given job.
|
| Callback_SharedResources_addProcessor |
Registers a
Processor for Storm notifications
so that other sessions can query whether or not a given
processor would accept a given task. |
| Callback_SharedResources_areTablesEnabled |
Returns true if a
Tables service is active in the grid. |
| Callback_SharedResources_getScriptRepository |
Returns the single (possibly mirrored) script repository which makes
all official scripts available.
|
| Callback_SharedResources_newTable |
Creates a new Format(""OMERO.tables"") file at the given path
on the given repository.
|
| Callback_SharedResources_openTable |
Returns a Table instance or null.
|
| Callback_SharedResources_removeProcessor |
Unregisters a
Processor from Storm
notifications. |
| Callback_SharedResources_repositories |
Returns a map between Repository descriptions (omero::model::OriginalFile
instances) and RepositoryPrx instances (possibly null).
|
| Callback_Table_addColumn |
Adds a column and returns the position index of the new column.
|
| Callback_Table_addData | |
| Callback_Table_close | |
| Callback_Table_delete | |
| Callback_Table_getAllMetadata | |
| Callback_Table_getHeaders |
Returns empty columns.
|
| Callback_Table_getMetadata | |
| Callback_Table_getNumberOfRows | |
| Callback_Table_getOriginalFile | |
| Callback_Table_getWhereList |
http://www.pytables.org/docs/manual/apb.html
Leave all three of start, stop, step to 0 to disable.
|
| Callback_Table_initialize |
Initializes the structure based on
|
| Callback_Table_read |
http://www.pytables.org/docs/manual/ch04.html#Table.read
|
| Callback_Table_readCoordinates |
Read the given rows of data.
|
| Callback_Table_setAllMetadata | |
| Callback_Table_setMetadata | |
| Callback_Table_slice |
Simple slice method which will return only the given columns
and rows in the order supplied.
|
| Callback_Table_update |
Allows the user to modify a Data instance passed back
from a query method and have the values modified.
|
| Callback_Tables_getRepository |
Returns the Repository which this Tables service is watching.
|
| Callback_Tables_getTable |
Returns the Table service for the given ""OMERO.tables"" file.
|
| ClusterNodeHolder | |
| ClusterNodePrxHelper |
Provides type-specific helper functions.
|
| ClusterNodePrxHolder | |
| Column |
Base type for dealing working with tabular data.
|
| ColumnArrayHelper | |
| ColumnArrayHolder | |
| ColumnHolder | |
| ColumnPrxHelper |
Provides type-specific helper functions.
|
| ColumnPrxHolder | |
| Data | |
| DataHolder | |
| DataPrxHelper |
Provides type-specific helper functions.
|
| DataPrxHolder | |
| DatasetColumn | |
| DatasetColumnHolder | |
| DatasetColumnPrxHelper |
Provides type-specific helper functions.
|
| DatasetColumnPrxHolder | |
| DoubleArrayColumn | |
| DoubleArrayColumnHolder | |
| DoubleArrayColumnPrxHelper |
Provides type-specific helper functions.
|
| DoubleArrayColumnPrxHolder | |
| DoubleColumn | |
| DoubleColumnHolder | |
| DoubleColumnPrxHelper |
Provides type-specific helper functions.
|
| DoubleColumnPrxHolder | |
| FileColumn | |
| FileColumnHolder | |
| FileColumnPrxHelper |
Provides type-specific helper functions.
|
| FileColumnPrxHolder | |
| FloatArrayColumn | |
| FloatArrayColumnHolder | |
| FloatArrayColumnPrxHelper |
Provides type-specific helper functions.
|
| FloatArrayColumnPrxHolder | |
| ImageColumn | |
| ImageColumnHolder | |
| ImageColumnPrxHelper |
Provides type-specific helper functions.
|
| ImageColumnPrxHolder | |
| ImportLocation |
Returned by
ManagedRepository.importFileset with
the information needed to proceed with an FS import. |
| ImportLocationHolder | |
| ImportLocationPrxHelper |
Provides type-specific helper functions.
|
| ImportLocationPrxHolder | |
| ImportProcessHolder | |
| ImportProcessListHelper | |
| ImportProcessListHolder | |
| ImportProcessPrxHelper |
Provides type-specific helper functions.
|
| ImportProcessPrxHolder | |
| ImportRequest |
Command object which will be used to create
the
Handle instances passed
back by the ImportProcess. |
| ImportRequestHolder | |
| ImportRequestPrxHelper |
Provides type-specific helper functions.
|
| ImportRequestPrxHolder | |
| ImportResponse |
Successful response returned from execution
of
ImportRequest. |
| ImportResponseHolder | |
| ImportResponsePrxHelper |
Provides type-specific helper functions.
|
| ImportResponsePrxHolder | |
| ImportSettings |
User configuration options.
|
| ImportSettingsHolder | |
| ImportSettingsPrxHelper |
Provides type-specific helper functions.
|
| ImportSettingsPrxHolder | |
| InteractiveProcessorHolder | |
| InteractiveProcessorI |
Processor implementation which delegates to an omero.grid.Processor
servant. |
| InteractiveProcessorListHelper | |
| InteractiveProcessorListHolder | |
| InteractiveProcessorPrxHelper |
Provides type-specific helper functions.
|
| InteractiveProcessorPrxHolder | |
| InternalRepositoryHolder | |
| InternalRepositoryPrxHelper |
Provides type-specific helper functions.
|
| InternalRepositoryPrxHolder | |
| JobParams |
Complete job description with all input and output Params.
|
| JobParamsHolder | |
| JobParamsPrxHelper |
Provides type-specific helper functions.
|
| JobParamsPrxHolder | |
| LongArrayColumn | |
| LongArrayColumnHolder | |
| LongArrayColumnPrxHelper |
Provides type-specific helper functions.
|
| LongArrayColumnPrxHolder | |
| LongColumn | |
| LongColumnHolder | |
| LongColumnPrxHelper |
Provides type-specific helper functions.
|
| LongColumnPrxHolder | |
| ManagedRepositoryHolder | |
| ManagedRepositoryPrxHelper |
Provides type-specific helper functions.
|
| ManagedRepositoryPrxHolder | |
| MaskColumn |
Column requiring special handling.
|
| MaskColumnHolder | |
| MaskColumnPrxHelper |
Provides type-specific helper functions.
|
| MaskColumnPrxHolder | |
| Param |
A single parameter to a Job.
|
| ParamHolder | |
| ParamMapHelper | |
| ParamMapHolder | |
| ParamPrxHelper |
Provides type-specific helper functions.
|
| ParamPrxHolder | |
| ParamsHelper | |
| PlateColumn | |
| PlateColumnHolder | |
| PlateColumnPrxHelper |
Provides type-specific helper functions.
|
| PlateColumnPrxHolder | |
| ProcessCallbackHolder | |
| ProcessCallbackI | |
| ProcessCallbackPrxHelper |
Provides type-specific helper functions.
|
| ProcessCallbackPrxHolder | |
| ProcessHolder | |
| ProcessorCallbackHolder | |
| ProcessorCallbackPrxHelper |
Provides type-specific helper functions.
|
| ProcessorCallbackPrxHolder | |
| ProcessorHolder | |
| ProcessorPrxHelper |
Provides type-specific helper functions.
|
| ProcessorPrxHolder | |
| ProcessPrxHelper |
Provides type-specific helper functions.
|
| ProcessPrxHolder | |
| RawAccessRequest | Deprecated
Not intended for use by production clients.
|
| RawAccessRequestHolder | |
| RawAccessRequestPrxHelper | Deprecated
Not intended for use by production clients.
|
| RawAccessRequestPrxHolder | |
| RepositoryHolder | |
| RepositoryMap |
Return value for
_SharedResourcesOperations.repositories(Ice.Current)
The descriptions and proxies arrays will have the same size and each
index in descriptions (non-null) will match a possibly null proxy, if
the given repository is not currently accessible. |
| RepositoryMapHolder | |
| RepositoryProxyListHelper | |
| RepositoryProxyListHolder | |
| RepositoryPrxHelper |
Provides type-specific helper functions.
|
| RepositoryPrxHolder | |
| RoiColumn | |
| RoiColumnHolder | |
| RoiColumnPrxHelper |
Provides type-specific helper functions.
|
| RoiColumnPrxHolder | |
| ScriptProcessHolder | |
| ScriptProcessPrxHelper |
Provides type-specific helper functions.
|
| ScriptProcessPrxHolder | |
| SharedResourcesHolder | |
| SharedResourcesPrxHelper |
Provides type-specific helper functions.
|
| SharedResourcesPrxHolder | |
| StringColumn | |
| StringColumnHolder | |
| StringColumnPrxHelper |
Provides type-specific helper functions.
|
| StringColumnPrxHolder | |
| TableHolder | |
| TablePrxHelper |
Provides type-specific helper functions.
|
| TablePrxHolder | |
| TablesHolder | |
| TablesPrxHelper |
Provides type-specific helper functions.
|
| TablesPrxHolder | |
| WellColumn | |
| WellColumnHolder | |
| WellColumnPrxHelper |
Provides type-specific helper functions.
|
| WellColumnPrxHolder |
| Enum | Description |
|---|---|
| ProcessCallbackI.Action |
| Exception | Description |
|---|---|
| FileDeleteException |
Specifies that a file with the given path has failed to
be deleted from the file system.
|
| RepositoryException |
Base repository exception.
|
| UnregisteredFileException |
Specifies that a file is located at the given location
that is not otherwise known by the repository.
|