ome.services.blitz.repo

Class BfPixelsStoreI

java.lang.Object

Ice.ObjectImpl

omero.api._RawPixelsStoreDisp

ome.services.blitz.repo.BfPixelsStoreI

All Implemented Interfaces:

Ice.Object, java.io.Serializable, java.lang.Cloneable, _PyramidServiceOperations, _PyramidServiceOperationsNC, _RawPixelsStoreOperations, _RawPixelsStoreOperationsNC, _ServiceInterfaceOperations, _ServiceInterfaceOperationsNC, _StatefulServiceInterfaceOperations, _StatefulServiceInterfaceOperationsNC, PyramidService, RawPixelsStore, ServiceInterface, StatefulServiceInterface

Deprecated.

may be removed in next major release

@Deprecated
public class BfPixelsStoreI
extends _RawPixelsStoreDisp

Since:

Beta4.1

See Also:

Serialized Form

Field Summary

Fields inherited from class omero.api._RawPixelsStoreDisp

__ids, serialVersionUID

Fields inherited from interface omero.api.RawPixelsStore

ice_staticId

Constructor Summary

Constructors

Constructor and Description
BfPixelsStoreI(java.lang.String path, loci.formats.ImageReader bfReader) Deprecated.

Method Summary

Modifier and Type	Method and Description
void	activate_async(AMD_StatefulServiceInterface_activate __cb, Ice.Current __current) Deprecated. Load a service implementation from disk if it was previously passivated.
void	calculateMessageDigest_async(AMD_RawPixelsStore_calculateMessageDigest __cb, Ice.Current __current) Deprecated. Calculates a SHA-1 message digest for the entire pixel store.
void	close_async(AMD_StatefulServiceInterface_close __cb, Ice.Current __current) Deprecated. Frees all resources -- passivated or active -- for the given stateful service and removes its name from the object adapter.
void	findMinMax_async(AMD_RawPixelsStore_findMinMax __cb, int[] channels, Ice.Current __current) Deprecated. Find the minimum and maximum pixel values for the specified channels by iterating over a full plane.
void	getByteWidth_async(AMD_RawPixelsStore_getByteWidth __cb, Ice.Current __current) Deprecated. Returns the byte width for the pixel store.
void	getCol_async(AMD_RawPixelsStore_getCol __cb, int x, int z, int c, int t, Ice.Current __current) Deprecated. Retrieves a particular column from this pixel store.
void	getCurrentEventContext_async(AMD_StatefulServiceInterface_getCurrentEventContext __cb, Ice.Current __current) Deprecated. To free clients from tracking the mapping from session to stateful service, each stateful service can returns its own context information.
void	getHistogram_async(AMD_RawPixelsStore_getHistogram __cb, int[] channels, int binCount, boolean globalRange, PlaneDef plane, Ice.Current __current) Deprecated. Retrieves the histogram data for the specified plane and channels.
void	getHypercube_async(AMD_RawPixelsStore_getHypercube __cb, java.util.List<java.lang.Integer> offset, java.util.List<java.lang.Integer> size, java.util.List<java.lang.Integer> step, Ice.Current __current) Deprecated. Retrieves a n-dimensional block from this pixel store.
void	getPixelsId_async(AMD_RawPixelsStore_getPixelsId __cb, Ice.Current __current) Deprecated. Returns the current Pixels set identifier.
void	getPixelsPath_async(AMD_RawPixelsStore_getPixelsPath __cb, Ice.Current __current) Deprecated. Returns the current Pixels path.
void	getPlane_async(AMD_RawPixelsStore_getPlane __cb, int z, int c, int t, Ice.Current __current) Deprecated. Retrieves a particular 2D image plane from this pixel store.
void	getPlaneOffset_async(AMD_RawPixelsStore_getPlaneOffset __cb, int z, int c, int t, Ice.Current __current) Deprecated. Retrieves the offset for a particular 2D image plane in this pixel store.
void	getPlaneRegion_async(AMD_RawPixelsStore_getPlaneRegion __cb, int z, int c, int t, int size, int offset, Ice.Current __current) Deprecated. Retrieves a region from a given plane from this pixel store.
void	getPlaneSize_async(AMD_RawPixelsStore_getPlaneSize __cb, Ice.Current __current) Deprecated. Retrieves the in memory size of a 2D image plane in this pixel store.
void	getRegion_async(AMD_RawPixelsStore_getRegion __cb, int size, long offset, Ice.Current __current) Deprecated. Retrieves a region from this pixel store.
void	getResolutionDescriptions_async(AMD_PyramidService_getResolutionDescriptions __cb, Ice.Current __current) Deprecated. Retrieves a more complete definition of the resolution level in question.
void	getResolutionLevel_async(AMD_PyramidService_getResolutionLevel __cb, Ice.Current __current) Deprecated. Retrieves the active resolution level.
void	getResolutionLevels_async(AMD_PyramidService_getResolutionLevels __cb, Ice.Current __current) Deprecated. Retrieves the number of resolution levels that the backing pixels pyramid contains.
void	getRow_async(AMD_RawPixelsStore_getRow __cb, int y, int z, int c, int t, Ice.Current __current) Deprecated. Retrieves a particular row or scanline from this pixel store.
void	getRowOffset_async(AMD_RawPixelsStore_getRowOffset __cb, int y, int z, int c, int t, Ice.Current __current) Deprecated. Retrieves the offset for a particular row or scanline in this pixel store.
void	getRowSize_async(AMD_RawPixelsStore_getRowSize __cb, Ice.Current __current) Deprecated. Retrieves the in memory size of a row or scanline of pixels in this pixel store.
void	getStack_async(AMD_RawPixelsStore_getStack __cb, int c, int t, Ice.Current __current) Deprecated. Retrieves the the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.
void	getStackOffset_async(AMD_RawPixelsStore_getStackOffset __cb, int c, int t, Ice.Current __current) Deprecated. Retrieves the offset for the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.
void	getStackSize_async(AMD_RawPixelsStore_getStackSize __cb, Ice.Current __current) Deprecated. Retrieves the in memory size of the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.
void	getTile_async(AMD_RawPixelsStore_getTile __cb, int z, int c, int t, int x, int y, int w, int h, Ice.Current __current) Deprecated. Retrieves a tile from this pixel buffer.
void	getTileSize_async(AMD_PyramidService_getTileSize __cb, Ice.Current __current) Deprecated. Retrieves the tile size for the pixel store.
void	getTimepoint_async(AMD_RawPixelsStore_getTimepoint __cb, int t, Ice.Current __current) Deprecated. Retrieves the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.
void	getTimepointOffset_async(AMD_RawPixelsStore_getTimepointOffset __cb, int t, Ice.Current __current) Deprecated. Retrieves the in memory size of the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.
void	getTimepointSize_async(AMD_RawPixelsStore_getTimepointSize __cb, Ice.Current __current) Deprecated. Retrieves the in memory size of the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.
void	getTotalSize_async(AMD_RawPixelsStore_getTotalSize __cb, Ice.Current __current) Deprecated. Retrieves the in memory size of the entire pixel store.
void	isFloat_async(AMD_RawPixelsStore_isFloat __cb, Ice.Current __current) Deprecated. Returns whether or not the pixel buffer has floating point pixels.
void	isSigned_async(AMD_RawPixelsStore_isSigned __cb, Ice.Current __current) Deprecated. Returns whether or not the pixel store has signed pixels.
void	passivate_async(AMD_StatefulServiceInterface_passivate __cb, Ice.Current __current) Deprecated. Causes the blitz server to store the service implementation to disk to free memory.
void	prepare_async(AMD_RawPixelsStore_prepare __cb, java.util.List<java.lang.Long> pixelsIds, Ice.Current __current) Deprecated. Prepares the stateful service with a cache of loaded Pixels objects.
void	requiresPixelsPyramid_async(AMD_PyramidService_requiresPixelsPyramid __cb, Ice.Current __current) Deprecated. Whether or not this raw pixels store requires a backing pixels pyramid to provide sub-resolutions of the data.
void	save_async(AMD_RawPixelsStore_save __cb, Ice.Current __current) Deprecated. Save the current state of the pixels, updating the SHA1.
void	setPixelsId_async(AMD_RawPixelsStore_setPixelsId __cb, long pixelsId, boolean bypassOriginalFile, Ice.Current __current) Deprecated. Initializes the stateful service for a given Pixels set.
void	setPlane_async(AMD_RawPixelsStore_setPlane __cb, byte[] buf, int z, int c, int t, Ice.Current __current) Deprecated. Sets a particular 2D image plane in this pixel store.
void	setRegion_async(AMD_RawPixelsStore_setRegion __cb, int size, long offset, byte[] buffer, Ice.Current __current) Deprecated. Sets a region in this pixel buffer.
void	setResolutionLevel_async(AMD_PyramidService_setResolutionLevel __cb, int resolutionLevel, Ice.Current __current) Deprecated. Sets the active resolution level.
void	setRow_async(AMD_RawPixelsStore_setRow __cb, byte[] buf, int y, int z, int c, int t, Ice.Current __current) Deprecated. Sets a particular row or scanline in this pixel store.
void	setStack_async(AMD_RawPixelsStore_setStack __cb, byte[] buf, int z, int c, int t, Ice.Current __current) Deprecated. Sets the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.
void	setTile_async(AMD_RawPixelsStore_setTile __cb, byte[] buf, int z, int c, int t, int x, int y, int w, int h, Ice.Current __current) Deprecated. Sets a tile in this pixel buffer.
void	setTimepoint_async(AMD_RawPixelsStore_setTimepoint __cb, byte[] buf, int t, Ice.Current __current) Deprecated. Sets the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.

Methods inherited from class omero.api._RawPixelsStoreDisp

___calculateMessageDigest, ___findMinMax, ___getByteWidth, ___getCol, ___getHistogram, ___getHypercube, ___getPixelsId, ___getPixelsPath, ___getPlane, ___getPlaneOffset, ___getPlaneRegion, ___getPlaneSize, ___getRegion, ___getRow, ___getRowOffset, ___getRowSize, ___getStack, ___getStackOffset, ___getStackSize, ___getTile, ___getTimepoint, ___getTimepointOffset, ___getTimepointSize, ___getTotalSize, ___isFloat, ___isSigned, ___prepare, ___save, ___setPixelsId, ___setPlane, ___setRegion, ___setRow, ___setStack, ___setTile, ___setTimepoint, __dispatch, __readImpl, __writeImpl, activate_async, calculateMessageDigest_async, close_async, findMinMax_async, getByteWidth_async, getCol_async, getCurrentEventContext_async, getHistogram_async, getHypercube_async, getPixelsId_async, getPixelsPath_async, getPlane_async, getPlaneOffset_async, getPlaneRegion_async, getPlaneSize_async, getRegion_async, getResolutionDescriptions_async, getResolutionLevel_async, getResolutionLevels_async, getRow_async, getRowOffset_async, getRowSize_async, getStack_async, getStackOffset_async, getStackSize_async, getTile_async, getTileSize_async, getTimepoint_async, getTimepointOffset_async, getTimepointSize_async, getTotalSize_async, ice_copyStateFrom, ice_id, ice_id, ice_ids, ice_ids, ice_isA, ice_isA, ice_staticId, isFloat_async, isSigned_async, passivate_async, prepare_async, requiresPixelsPyramid_async, save_async, setPixelsId_async, setPlane_async, setRegion_async, setResolutionLevel_async, setRow_async, setStack_async, setTile_async, setTimepoint_async

Methods inherited from class Ice.ObjectImpl

___ice_id, ___ice_ids, ___ice_isA, ___ice_ping, __checkMode, __read, __read, __readImpl, __write, __write, __writeImpl, clone, ice_dispatch, ice_dispatch, ice_operationAttributes, ice_ping, ice_ping, ice_postUnmarshal, ice_preMarshal

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface Ice.Object

__read, __read, __write, __write, clone, ice_dispatch, ice_dispatch, ice_operationAttributes, ice_ping, ice_ping, ice_postUnmarshal, ice_preMarshal

Constructor Detail

BfPixelsStoreI

public BfPixelsStoreI(java.lang.String path,
                      loci.formats.ImageReader bfReader)
               throws java.io.IOException,
                      loci.formats.FormatException

Deprecated.

Throws:

java.io.IOException

loci.formats.FormatException

Method Detail

calculateMessageDigest_async

public void calculateMessageDigest_async(AMD_RawPixelsStore_calculateMessageDigest __cb,
                                         Ice.Current __current)
                                  throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Calculates a SHA-1 message digest for the entire pixel store.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getByteWidth_async

public void getByteWidth_async(AMD_RawPixelsStore_getByteWidth __cb,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Returns the byte width for the pixel store.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getHypercube_async

public void getHypercube_async(AMD_RawPixelsStore_getHypercube __cb,
                               java.util.List<java.lang.Integer> offset,
                               java.util.List<java.lang.Integer> size,
                               java.util.List<java.lang.Integer> step,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves a n-dimensional block from this pixel store.

Parameters:

__cb - The callback object for the operation.

offset - offset for each dimension within pixel store.

step - needed of each dimension (dependent on dimension).

__current - The Current object for the invocation.

Throws:

ServerError

getCol_async

public void getCol_async(AMD_RawPixelsStore_getCol __cb,
                         int x,
                         int z,
                         int c,
                         int t,
                         Ice.Current __current)
                  throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves a particular column from this pixel store.

Parameters:

__cb - The callback object for the operation.

x - offset across the X-axis of the pixel store.

c - offset across the C-axis of the pixel store.

__current - The Current object for the invocation.

Throws:

ServerError

getPlaneOffset_async

public void getPlaneOffset_async(AMD_RawPixelsStore_getPlaneOffset __cb,
                                 int z,
                                 int c,
                                 int t,
                                 Ice.Current __current)
                          throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the offset for a particular 2D image plane in this pixel store.

Parameters:

__cb - The callback object for the operation.

z - offset across the Z-axis of the pixel buffer.

t - offset across the T-axis of the pixel buffer.

__current - The Current object for the invocation.

Throws:

ServerError

getPlaneRegion_async

public void getPlaneRegion_async(AMD_RawPixelsStore_getPlaneRegion __cb,
                                 int z,
                                 int c,
                                 int t,
                                 int size,
                                 int offset,
                                 Ice.Current __current)
                          throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves a region from a given plane from this pixel store.

Parameters:

__cb - The callback object for the operation.

z - offset across the Z-axis of the pixel store.

t - offset across the T-axis of the pixel store.

offset - the offset at which to retrieve size pixels.

__current - The Current object for the invocation.

Throws:

ServerError

getPlaneSize_async

public void getPlaneSize_async(AMD_RawPixelsStore_getPlaneSize __cb,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the in memory size of a 2D image plane in this pixel store.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getPlane_async

public void getPlane_async(AMD_RawPixelsStore_getPlane __cb,
                           int z,
                           int c,
                           int t,
                           Ice.Current __current)
                    throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves a particular 2D image plane from this pixel store.

Parameters:

__cb - The callback object for the operation.

z - offset across the Z-axis of the pixel store.

t - offset across the T-axis of the pixel store.

__current - The Current object for the invocation.

Throws:

ServerError

getRegion_async

public void getRegion_async(AMD_RawPixelsStore_getRegion __cb,
                            int size,
                            long offset,
                            Ice.Current __current)
                     throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves a region from this pixel store.

Parameters:

__cb - The callback object for the operation.

size - byte width of the region to retrieve.

__current - The Current object for the invocation.

Throws:

ServerError

getRowOffset_async

public void getRowOffset_async(AMD_RawPixelsStore_getRowOffset __cb,
                               int y,
                               int z,
                               int c,
                               int t,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the offset for a particular row or scanline in this pixel store.

Parameters:

__cb - The callback object for the operation.

y - offset across the Y-axis of the pixel buffer.

c - offset across the C-axis of the pixel buffer.

__current - The Current object for the invocation.

Throws:

ServerError

getRowSize_async

public void getRowSize_async(AMD_RawPixelsStore_getRowSize __cb,
                             Ice.Current __current)
                      throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the in memory size of a row or scanline of pixels in this pixel store.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getRow_async

public void getRow_async(AMD_RawPixelsStore_getRow __cb,
                         int y,
                         int z,
                         int c,
                         int t,
                         Ice.Current __current)
                  throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves a particular row or scanline from this pixel store.

Parameters:

__cb - The callback object for the operation.

y - offset across the Y-axis of the pixel store.

c - offset across the C-axis of the pixel store.

__current - The Current object for the invocation.

Throws:

ServerError

getStackOffset_async

public void getStackOffset_async(AMD_RawPixelsStore_getStackOffset __cb,
                                 int c,
                                 int t,
                                 Ice.Current __current)
                          throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the offset for the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.

Parameters:

__cb - The callback object for the operation.

c - offset across the C-axis of the pixel buffer.

__current - The Current object for the invocation.

Throws:

ServerError

getStackSize_async

public void getStackSize_async(AMD_RawPixelsStore_getStackSize __cb,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the in memory size of the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getStack_async

public void getStack_async(AMD_RawPixelsStore_getStack __cb,
                           int c,
                           int t,
                           Ice.Current __current)
                    throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.

Parameters:

__cb - The callback object for the operation.

c - offset across the C-axis of the pixel store.

__current - The Current object for the invocation.

Throws:

ServerError

getTimepointOffset_async

public void getTimepointOffset_async(AMD_RawPixelsStore_getTimepointOffset __cb,
                                     int t,
                                     Ice.Current __current)
                              throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the in memory size of the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.

Parameters:

__cb - The callback object for the operation.

t - offset across the T-axis of the pixel buffer.

__current - The Current object for the invocation.

Throws:

ServerError

getTimepointSize_async

public void getTimepointSize_async(AMD_RawPixelsStore_getTimepointSize __cb,
                                   Ice.Current __current)
                            throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the in memory size of the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getTimepoint_async

public void getTimepoint_async(AMD_RawPixelsStore_getTimepoint __cb,
                               int t,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.

Parameters:

__cb - The callback object for the operation.

t - offset across the T-axis of the pixel store.

__current - The Current object for the invocation.

Throws:

ServerError

getTotalSize_async

public void getTotalSize_async(AMD_RawPixelsStore_getTotalSize __cb,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the in memory size of the entire pixel store.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

isFloat_async

public void isFloat_async(AMD_RawPixelsStore_isFloat __cb,
                          Ice.Current __current)
                   throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Returns whether or not the pixel buffer has floating point pixels.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

isSigned_async

public void isSigned_async(AMD_RawPixelsStore_isSigned __cb,
                           Ice.Current __current)
                    throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Returns whether or not the pixel store has signed pixels.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

prepare_async

public void prepare_async(AMD_RawPixelsStore_prepare __cb,
                          java.util.List<java.lang.Long> pixelsIds,
                          Ice.Current __current)
                   throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Prepares the stateful service with a cache of loaded Pixels objects. This method is designed to combat query overhead, where many sets of Pixels are to be read from or written to, by loading all the Pixels sets at once. Multiple calls will result in the existing cache being overwritten.

Parameters:

__cb - The callback object for the operation.

pixelsIds - Pixels IDs to cache.

__current - The Current object for the invocation.

Throws:

ServerError

save_async

public void save_async(AMD_RawPixelsStore_save __cb,
                       Ice.Current __current)
                throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Save the current state of the pixels, updating the SHA1. This should only be called AFTER all data is successfully set. Future invocations of set methods may be disallowed. This read-only status will allow background processing (generation of thumbnails, compression, etc.) to begin. More information under RawPixelsStore. A null instance will be returned if no save was performed.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

setPixelsId_async

public void setPixelsId_async(AMD_RawPixelsStore_setPixelsId __cb,
                              long pixelsId,
                              boolean bypassOriginalFile,
                              Ice.Current __current)
                       throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Initializes the stateful service for a given Pixels set.

Parameters:

__cb - The callback object for the operation.

pixelsId - Pixels set identifier.

__current - The Current object for the invocation.

Throws:

ServerError

getPixelsId_async

public void getPixelsId_async(AMD_RawPixelsStore_getPixelsId __cb,
                              Ice.Current __current)
                       throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Returns the current Pixels set identifier.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getPixelsPath_async

public void getPixelsPath_async(AMD_RawPixelsStore_getPixelsPath __cb,
                                Ice.Current __current)
                         throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Returns the current Pixels path.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

setPlane_async

public void setPlane_async(AMD_RawPixelsStore_setPlane __cb,
                           byte[] buf,
                           int z,
                           int c,
                           int t,
                           Ice.Current __current)
                    throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Sets a particular 2D image plane in this pixel store.

Parameters:

__cb - The callback object for the operation.

buf - a byte array of the data comprising this 2D image plane.

c - offset across the C-axis of the pixel store.

__current - The Current object for the invocation.

Throws:

ServerError

setRegion_async

public void setRegion_async(AMD_RawPixelsStore_setRegion __cb,
                            int size,
                            long offset,
                            byte[] buffer,
                            Ice.Current __current)
                     throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Sets a region in this pixel buffer.

Parameters:

__cb - The callback object for the operation.

size - byte width of the region to set.

buffer - a byte array of the data. See Read-only caveat under RawPixelsStore

__current - The Current object for the invocation.

Throws:

ServerError

setRow_async

public void setRow_async(AMD_RawPixelsStore_setRow __cb,
                         byte[] buf,
                         int y,
                         int z,
                         int c,
                         int t,
                         Ice.Current __current)
                  throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Sets a particular row or scanline in this pixel store.

Parameters:

__cb - The callback object for the operation.

buf - a byte array of the data comprising this row or scanline.

z - offset across the Z-axis of the pixel store.

t - offset across the T-axis of the pixel store. See Read-only caveat under RawPixelsStore

__current - The Current object for the invocation.

Throws:

ServerError

setStack_async

public void setStack_async(AMD_RawPixelsStore_setStack __cb,
                           byte[] buf,
                           int z,
                           int c,
                           int t,
                           Ice.Current __current)
                    throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Sets the entire number of optical sections for a single wavelength or channel at a particular timepoint in this pixel store.

Parameters:

__cb - The callback object for the operation.

buf - a byte array of the data comprising this stack.

t - offset across the T-axis of the pixel store. See Read-only caveat under RawPixelsStore

__current - The Current object for the invocation.

Throws:

ServerError

setTimepoint_async

public void setTimepoint_async(AMD_RawPixelsStore_setTimepoint __cb,
                               byte[] buf,
                               int t,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Sets the entire number of optical sections for all wavelengths or channels at a particular timepoint in this pixel store.

Parameters:

__cb - The callback object for the operation.

buf - a byte array of the data comprising this timepoint.

__current - The Current object for the invocation.

Throws:

ServerError

getHistogram_async

public void getHistogram_async(AMD_RawPixelsStore_getHistogram __cb,
                               int[] channels,
                               int binCount,
                               boolean globalRange,
                               PlaneDef plane,
                               Ice.Current __current)
                        throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves the histogram data for the specified plane and channels. This method can currently only handle non-pyramid images.

Parameters:

__cb - The callback object for the operation.

channels - the channels to generate the histogram data for

plane - the plane (optional, default: whole region of first z/t plane)

__current - The Current object for the invocation.

Throws:

ServerError

findMinMax_async

public void findMinMax_async(AMD_RawPixelsStore_findMinMax __cb,
                             int[] channels,
                             Ice.Current __current)
                      throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Find the minimum and maximum pixel values for the specified channels by iterating over a full plane. In case of multi-z/t images only the 'middle' plane with index maxZ/2, respectively maxT/2 is taken into account. Note: This method can currently only handle non-pyramid images, otherwise an empty map will be returned.

Parameters:

__cb - The callback object for the operation.

channels - the channels

__current - The Current object for the invocation.

Throws:

ServerError

activate_async

public void activate_async(AMD_StatefulServiceInterface_activate __cb,
                           Ice.Current __current)
                    throws ServerError

Deprecated.

Description copied from interface: _StatefulServiceInterfaceOperations

Load a service implementation from disk if it was previously passivated. It is unnecessary to call this method since activation happens automatically, but calling this may prevent a short lapse when the service is first accessed after passivation. It is safe to call this method at any time, even when the service is not passivated.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

close_async

public void close_async(AMD_StatefulServiceInterface_close __cb,
                        Ice.Current __current)
                 throws ServerError

Deprecated.

Description copied from interface: _StatefulServiceInterfaceOperations

Frees all resources -- passivated or active -- for the given stateful service and removes its name from the object adapter. Any further method calls will fail with a Ice::NoSuchObjectException. Note: with JavaEE, the close method was called publicly, and internally this called destroy(). As of the OmeroBlitz migration, this functionality has been combined.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getCurrentEventContext_async

public void getCurrentEventContext_async(AMD_StatefulServiceInterface_getCurrentEventContext __cb,
                                         Ice.Current __current)
                                  throws ServerError

Deprecated.

Description copied from interface: _StatefulServiceInterfaceOperations

To free clients from tracking the mapping from session to stateful service, each stateful service can returns its own context information.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

passivate_async

public void passivate_async(AMD_StatefulServiceInterface_passivate __cb,
                            Ice.Current __current)
                     throws ServerError

Deprecated.

Description copied from interface: _StatefulServiceInterfaceOperations

Causes the blitz server to store the service implementation to disk to free memory. This is typically done automatically by the server when a pre-defined memory limit is reached, but can be used by the client if it clear that a stateful service will not be used for some time. Activation will happen automatically whether passivation was done manually or automatically.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getResolutionLevels_async

public void getResolutionLevels_async(AMD_PyramidService_getResolutionLevels __cb,
                                      Ice.Current __current)
                               throws ServerError

Deprecated.

Description copied from interface: _PyramidServiceOperations

Retrieves the number of resolution levels that the backing pixels pyramid contains.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getResolutionDescriptions_async

public void getResolutionDescriptions_async(AMD_PyramidService_getResolutionDescriptions __cb,
                                            Ice.Current __current)
                                     throws ServerError

Deprecated.

Description copied from interface: _PyramidServiceOperations

Retrieves a more complete definition of the resolution level in question. The size of this array will be of length getResolutionLevels.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getTileSize_async

public void getTileSize_async(AMD_PyramidService_getTileSize __cb,
                              Ice.Current __current)
                       throws ServerError

Deprecated.

Description copied from interface: _PyramidServiceOperations

Retrieves the tile size for the pixel store.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

requiresPixelsPyramid_async

public void requiresPixelsPyramid_async(AMD_PyramidService_requiresPixelsPyramid __cb,
                                        Ice.Current __current)
                                 throws ServerError

Deprecated.

Description copied from interface: _PyramidServiceOperations

Whether or not this raw pixels store requires a backing pixels pyramid to provide sub-resolutions of the data.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

setResolutionLevel_async

public void setResolutionLevel_async(AMD_PyramidService_setResolutionLevel __cb,
                                     int resolutionLevel,
                                     Ice.Current __current)
                              throws ServerError

Deprecated.

Description copied from interface: _PyramidServiceOperations

Sets the active resolution level.

Parameters:

__cb - The callback object for the operation.

resolutionLevel - The resolution level to be used by the pixel buffer.

__current - The Current object for the invocation.

Throws:

ServerError

getResolutionLevel_async

public void getResolutionLevel_async(AMD_PyramidService_getResolutionLevel __cb,
                                     Ice.Current __current)
                              throws ServerError

Deprecated.

Description copied from interface: _PyramidServiceOperations

Retrieves the active resolution level.

Parameters:

__cb - The callback object for the operation.

__current - The Current object for the invocation.

Throws:

ServerError

getTile_async

public void getTile_async(AMD_RawPixelsStore_getTile __cb,
                          int z,
                          int c,
                          int t,
                          int x,
                          int y,
                          int w,
                          int h,
                          Ice.Current __current)
                   throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Retrieves a tile from this pixel buffer.

Parameters:

__cb - The callback object for the operation.

z - offset across the Z-axis of the pixel buffer.

t - offset across the T-axis of the pixel buffer.

y - Top left corner of the tile, Y offset.

h - Height of the tile.

__current - The Current object for the invocation.

Throws:

ServerError

setTile_async

public void setTile_async(AMD_RawPixelsStore_setTile __cb,
                          byte[] buf,
                          int z,
                          int c,
                          int t,
                          int x,
                          int y,
                          int w,
                          int h,
                          Ice.Current __current)
                   throws ServerError

Deprecated.

Description copied from interface: _RawPixelsStoreOperations

Sets a tile in this pixel buffer.

Parameters:

__cb - The callback object for the operation.

buf - A byte array of the data.

c - offset across the C-axis of the pixel buffer.

x - Top left corner of the tile, X offset.

w - Width of the tile.

__current - The Current object for the invocation.

Throws:

ServerError