ome.formats.importer

Class ImportFixture

java.lang.Object

ome.formats.importer.ImportFixture

public class ImportFixture
extends java.lang.Object

test fixture for importing files without a GUI.

Since:

3.0-M3

See Also:

OMEROMetadataStoreClient

Constructor Summary

Constructors

Constructor and Description
ImportFixture(OMEROMetadataStoreClient store, OMEROWrapper reader)

Method Summary

Modifier and Type	Method and Description
void	doImport() Runs import by looping through all files and then calling ImportLibrary.importImage(ImportContainer, int, int, int).
ImportFixture	put(java.io.File file, Dataset ds)
ImportFixture	putAll(java.util.Map<java.io.File,Dataset> map)
void	setUp() checks for the necessary fields and initializes the ImportLibrary
void	tearDown() sets ImportLibrary, OMEROMetadataStoreClient, and file array to null.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ImportFixture

public ImportFixture(OMEROMetadataStoreClient store,
                     OMEROWrapper reader)

Method Detail

put

public ImportFixture put(java.io.File file,
                         Dataset ds)

putAll

public ImportFixture putAll(java.util.Map<java.io.File,Dataset> map)

setUp

public void setUp()
           throws java.lang.Exception

checks for the necessary fields and initializes the ImportLibrary

Throws:

java.lang.Exception - if setup failed

tearDown

public void tearDown()

sets ImportLibrary, OMEROMetadataStoreClient, and file array to null. Also attempts to call FormatReader.close().

doImport

public void doImport()
              throws java.lang.Throwable

Runs import by looping through all files and then calling ImportLibrary.importImage(ImportContainer, int, int, int).

Throws:

java.lang.Throwable - reporting a problem with import