#include <ome/xml/model/Plane.h>

Inheritance diagram for ome::xml::model::Plane:

Collaboration diagram for ome::xml::model::Plane:

Classes
class	Impl
	Private implementation details of Plane model object. More...

Public Member Functions
	Plane ()
	Default constructor.

	Plane (const Plane &copy)
	Copy constructor. More...

virtual	~Plane ()
	Destructor.

const std::string &	elementName () const
	Get the element name of this model object. More...

bool	validElementName (const std::string &name) const
	Check if a given element name is valid for processing by this model object. More...

virtual SKIP void	update (const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
	Update the object hierarchy recursively from an XML DOM tree. More...

bool	link (std::shared_ptr< Reference > &reference, std::shared_ptr< ome::xml::model::OMEModelObject > &object)
	Link a given OME model object to this model object. More...

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > &	getExposureTime ()
	Get the ExposureTime property. More...

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > &	getExposureTime () const
	Get the ExposureTime property. More...

void	setExposureTime (const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > &exposureTime)
	Set the ExposureTime property. More...

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &	getPositionZ ()
	Get the PositionZ property. More...

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &	getPositionZ () const
	Get the PositionZ property. More...

void	setPositionZ (const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &positionZ)
	Set the PositionZ property. More...

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &	getPositionX ()
	Get the PositionX property. More...

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &	getPositionX () const
	Get the PositionX property. More...

void	setPositionX (const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &positionX)
	Set the PositionX property. More...

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &	getPositionY ()
	Get the PositionY property. More...

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &	getPositionY () const
	Get the PositionY property. More...

void	setPositionY (const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > &positionY)
	Set the PositionY property. More...

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > &	getDeltaT ()
	Get the DeltaT property. More...

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > &	getDeltaT () const
	Get the DeltaT property. More...

void	setDeltaT (const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > &deltaT)
	Set the DeltaT property. More...

const ome::xml::model::primitives::NonNegativeInteger &	getTheC () const
	Get the TheC property. More...

void	setTheC (const ome::xml::model::primitives::NonNegativeInteger &theC)
	Set the TheC property. More...

const ome::xml::model::primitives::NonNegativeInteger &	getTheZ () const
	Get the TheZ property. More...

void	setTheZ (const ome::xml::model::primitives::NonNegativeInteger &theZ)
	Set the TheZ property. More...

const ome::xml::model::primitives::NonNegativeInteger &	getTheT () const
	Get the TheT property. More...

void	setTheT (const ome::xml::model::primitives::NonNegativeInteger &theT)
	Set the TheT property. More...

std::shared_ptr< std::string >	getHashSHA1 ()
	Get the HashSHA1 property. More...

const std::shared_ptr< std::string >	getHashSHA1 () const
	Get the HashSHA1 property. More...

void	setHashSHA1 (std::shared_ptr< std::string > &hashSHA1)
	Set the HashSHA1 property. More...

OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type	sizeOfLinkedAnnotationList () const
	Get size of linked Annotation list. More...

OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type	getLinkedAnnotationList () const
	Get the linked Annotation list. More...

const std::weak_ptr< ome::xml::model::Annotation > &	getLinkedAnnotation (OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type index) const
	Get linked Annotation. More...

const std::weak_ptr< ome::xml::model::Annotation > &	setLinkedAnnotation (OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type index, const std::shared_ptr< ome::xml::model::Annotation > &annotation)
	Set linked Annotation. More...

bool	linkAnnotation (const std::shared_ptr< ome::xml::model::Annotation > &annotation)
	Link Annotation. More...

bool	unlinkAnnotation (const std::shared_ptr< ome::xml::model::Annotation > &annotation)
	Unlink Annotation. More...

std::weak_ptr< ome::xml::model::Pixels >	getPixels ()
	Get the Pixels property. More...

const std::weak_ptr< ome::xml::model::Pixels >	getPixels () const
	Get the Pixels property. More...

void	setPixels (std::weak_ptr< ome::xml::model::Pixels > &pixels_BackReference)
	Set the Pixels property. More...

const std::string &	getXMLNamespace () const
	Get the XML namespace for this model object. More...

Public Member Functions inherited from ome::xml::model::detail::OMEModelObject
virtual	~OMEModelObject ()
	Destructor.

virtual common::xml::dom::Element	asXMLElement (common::xml::dom::Document &document) const
	Transform the object hierarchy rooted at this element to XML. More...

virtual void	asXMLElement (common::xml::dom::Document &document, common::xml::dom::Element &element) const
	Transform the object hierarchy rooted at this element to XML. More...

virtual void	update (const common::xml::dom::Element &element, ::ome::xml::model::OMEModel &model)
	Update the object hierarchy recursively from an XML DOM tree. More...

virtual bool	link (std::shared_ptr< Reference > &reference, std::shared_ptr<::ome::xml::model::OMEModelObject > &object)
	Link a given OME model object to this model object. More...

Public Member Functions inherited from ome::xml::model::OMEModelObject
virtual bool	link (std::shared_ptr< Reference > &reference, std::shared_ptr< OMEModelObject > &object)=0
	Link a given OME model object to this model object. More...

Static Public Member Functions
static std::shared_ptr< Plane >	create (const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
	Create a Plane model object from DOM element. More...

Static Public Member Functions inherited from ome::xml::model::detail::OMEModelObject
static std::vector< common::xml::dom::Element >	getChildrenByTagName (const common::xml::dom::Element &parent, const std::string &name)
	Retrieve all the children of an element that have a given tag name. More...

static std::string	stripNamespacePrefix (const std::string &value)
	Strip the namespace prefix from a tag name. More...

Protected Member Functions
virtual void	asXMLElementInternal (common::xml::dom::Document &document, common::xml::dom::Element &element) const
	Transform the object hierarchy rooted at this element to XML. More...

Protected Member Functions inherited from ome::xml::model::detail::OMEModelObject
	OMEModelObject (const std::string &objectType="OMEModelObject")
	Constructor. More...

	OMEModelObject (const OMEModelObject &copy)
	Copy constructor. More...

template<class C , typename T >
bool	contains (const C &container, const std::shared_ptr< T > &element)
	Check if a container contains a particular element. More...

Protected Member Functions inherited from ome::xml::model::OMEModelObject
	OMEModelObject ()
	Constructor.

Private Attributes
std::shared_ptr< Impl >	impl
	Private implementation details.

Additional Inherited Members
Protected Attributes inherited from ome::xml::model::detail::OMEModelObject
ome::common::Logger	logger
	Message logger.

Detailed Description

Plane model object.

Constructor & Destructor Documentation

◆ Plane()

ome::xml::model::Plane::Plane ( const Plane & copy )

Copy constructor.

Parameters

copy	the Plane to copy.

Member Function Documentation

◆ asXMLElementInternal()

void ome::xml::model::Plane::asXMLElementInternal	(	common::xml::dom::Document &	document,
		common::xml::dom::Element &	element
	)		const

protectedvirtual

Transform the object hierarchy rooted at this element to XML.

This internal implementation of asXMLelement also requires an XML element, which must not be null, or may be instantiated and passed from superclasses.

Concrete model object implementations should override this method.

Parameters

document	XML document for element creation.
element	XML element for setting model data.

Implements ome::xml::model::detail::OMEModelObject.

References ome::common::xml::dom::Node::appendChild(), ome::xml::model::detail::OMEModelObject::asXMLElementInternal(), ome::common::xml::dom::Document::createElementNS(), getXMLNamespace(), impl, and ome::common::xml::dom::Element::setAttribute().

◆ create()

std::shared_ptr< Plane > ome::xml::model::Plane::create	(	const common::xml::dom::Element &	element,
		ome::xml::model::OMEModel &	model
	)

static

Create a Plane model object from DOM element.

Parameters

element	root of the XML DOM tree to from which to construct the model object graph.
model	handler for the OME model used to track instances and references seen during the update.

Exceptions

EnumerationException if there is an error instantiating an enumeration during model object creation, or ModelException if there are any consistency or validity errors found during processing.

Returns: a new model object.

Referenced by ome::xml::model::Pixels::update().

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◆ elementName()

const std::string & ome::xml::model::Plane::elementName ( ) const

virtual

Get the element name of this model object.

This will be the most-derived class name.

Returns: the element type.

Implements ome::xml::model::OMEModelObject.

◆ getDeltaT() [1/2]

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > & ome::xml::model::Plane::getDeltaT ( )

Get the DeltaT property.

Returns: the DeltaT property.

References impl.

◆ getDeltaT() [2/2]

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > & ome::xml::model::Plane::getDeltaT ( ) const

Get the DeltaT property.

Returns: the DeltaT property.

References impl.

◆ getExposureTime() [1/2]

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > & ome::xml::model::Plane::getExposureTime ( )

Get the ExposureTime property.

Returns: the ExposureTime property.

References impl.

◆ getExposureTime() [2/2]

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > & ome::xml::model::Plane::getExposureTime ( ) const

Get the ExposureTime property.

Returns: the ExposureTime property.

References impl.

◆ getHashSHA1() [1/2]

std::shared_ptr< std::string > ome::xml::model::Plane::getHashSHA1 ( )

Get the HashSHA1 property.

Returns: the HashSHA1 property.

References impl.

◆ getHashSHA1() [2/2]

const std::shared_ptr< std::string > ome::xml::model::Plane::getHashSHA1 ( ) const

Get the HashSHA1 property.

Returns: the HashSHA1 property.

References impl.

◆ getLinkedAnnotation()

const std::weak_ptr< ome::xml::model::Annotation > & ome::xml::model::Plane::getLinkedAnnotation ( OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type index ) const

Get linked Annotation.

Parameters

index the index number of the Annotation.

Returns: a weak pointer to the Annotation.

Exceptions

std::out_of_range if the index is invalid.

References impl.

◆ getLinkedAnnotationList()

OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type ome::xml::model::Plane::getLinkedAnnotationList ( ) const

Get the linked Annotation list.

Returns: a reference to the list.

References impl.

◆ getPixels() [1/2]

std::weak_ptr< ome::xml::model::Pixels > ome::xml::model::Plane::getPixels ( )

Get the Pixels property.

Returns: the Pixels property.

References impl.

◆ getPixels() [2/2]

const std::weak_ptr< ome::xml::model::Pixels > ome::xml::model::Plane::getPixels ( ) const

Get the Pixels property.

Returns: the Pixels property.

References impl.

◆ getPositionX() [1/2]

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & ome::xml::model::Plane::getPositionX ( )

Get the PositionX property.

Returns: the PositionX property.

References impl.

◆ getPositionX() [2/2]

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & ome::xml::model::Plane::getPositionX ( ) const

Get the PositionX property.

Returns: the PositionX property.

References impl.

◆ getPositionY() [1/2]

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & ome::xml::model::Plane::getPositionY ( )

Get the PositionY property.

Returns: the PositionY property.

References impl.

◆ getPositionY() [2/2]

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & ome::xml::model::Plane::getPositionY ( ) const

Get the PositionY property.

Returns: the PositionY property.

References impl.

◆ getPositionZ() [1/2]

std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & ome::xml::model::Plane::getPositionZ ( )

Get the PositionZ property.

Returns: the PositionZ property.

References impl.

◆ getPositionZ() [2/2]

const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & ome::xml::model::Plane::getPositionZ ( ) const

Get the PositionZ property.

Returns: the PositionZ property.

References impl.

◆ getTheC()

const ome::xml::model::primitives::NonNegativeInteger & ome::xml::model::Plane::getTheC ( ) const

Get the TheC property.

Returns: the TheC property.

References impl.

◆ getTheT()

const ome::xml::model::primitives::NonNegativeInteger & ome::xml::model::Plane::getTheT ( ) const

Get the TheT property.

Returns: the TheT property.

References impl.

◆ getTheZ()

const ome::xml::model::primitives::NonNegativeInteger & ome::xml::model::Plane::getTheZ ( ) const

Get the TheZ property.

Returns: the TheZ property.

References impl.

◆ getXMLNamespace()

const std::string & ome::xml::model::Plane::getXMLNamespace ( ) const

virtual

Get the XML namespace for this model object.

Returns: the XML namespace.

Implements ome::xml::model::OMEModelObject.

Referenced by asXMLElementInternal().

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◆ link()

bool ome::xml::model::Plane::link	(	std::shared_ptr< Reference > &	reference,
		std::shared_ptr< ome::xml::model::OMEModelObject > &	object
	)

Link a given OME model object to this model object.

Parameters

reference	type qualifier for the reference. This should be the corresponding reference type for object. If, for example, object is of type Image, reference must be of type ImageRef.
object	Model object to link to.

Returns: true if this model object was able to handle the reference, otherwise false.

Todo:: the use of reference to provide type information for the type of object is unconventional and quite possibly unnecessary–a simple string or type_info would suffice for what it's being used for, if it's needed at all. Is this true for all cases? The implementation also needs to do strict checking of the object type; it's not currently failing if it's of the wrong type. This applies to all generated model objects implementing this interface.

Todo:: This bit is silly; why do we have two dynamic_casts here.

References impl, ome::xml::model::detail::OMEModelObject::link(), ome::xml::model::Annotation::linkPlane(), and ome::xml::model::detail::OMEModelObject::logger.

◆ linkAnnotation()

bool ome::xml::model::Plane::linkAnnotation ( const std::shared_ptr< ome::xml::model::Annotation > & annotation )

Link Annotation.

Parameters

annotation the Annotation to link.

Returns: true if the object was added to the internal annotationLinks list, otherwise false.

Todo:: Why have a return value here; what is it used for? Is this an artifact of the Java API?

References impl.

◆ setDeltaT()

void ome::xml::model::Plane::setDeltaT ( const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > & deltaT )

Set the DeltaT property.

Parameters

deltaT the value to set.

References impl.

Referenced by update().

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◆ setExposureTime()

void ome::xml::model::Plane::setExposureTime ( const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsTime > > & exposureTime )

Set the ExposureTime property.

Parameters

exposureTime the value to set.

References impl.

Referenced by update().

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◆ setHashSHA1()

void ome::xml::model::Plane::setHashSHA1 ( std::shared_ptr< std::string > & hashSHA1 )

Set the HashSHA1 property.

Parameters

hashSHA1 the value to set.

References impl.

Referenced by update().

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◆ setLinkedAnnotation()

const std::weak_ptr< ome::xml::model::Annotation > & ome::xml::model::Plane::setLinkedAnnotation	(	OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type	index,
		const std::shared_ptr< ome::xml::model::Annotation > &	annotation
	)

Set linked Annotation.

Note: The index must be valid.

Parameters

index	the index number of the Annotation.
annotation	the Annotation to set.

Returns: a weak pointer to the Annotation.

Exceptions

std::out_of_range if the index is invalid.

References impl.

◆ setPixels()

void ome::xml::model::Plane::setPixels ( std::weak_ptr< ome::xml::model::Pixels > & pixels_BackReference )

Set the Pixels property.

Parameters

pixels_BackReference the value to set.

References impl.

◆ setPositionX()

void ome::xml::model::Plane::setPositionX ( const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & positionX )

Set the PositionX property.

Parameters

positionX the value to set.

References impl.

Referenced by update().

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◆ setPositionY()

void ome::xml::model::Plane::setPositionY ( const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & positionY )

Set the PositionY property.

Parameters

positionY the value to set.

References impl.

Referenced by update().

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◆ setPositionZ()

void ome::xml::model::Plane::setPositionZ ( const std::shared_ptr< ome::xml::model::primitives::Quantity< ome::xml::model::enums::UnitsLength > > & positionZ )

Set the PositionZ property.

Parameters

positionZ the value to set.

References impl.

Referenced by update().

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◆ setTheC()

void ome::xml::model::Plane::setTheC ( const ome::xml::model::primitives::NonNegativeInteger & theC )

Set the TheC property.

Parameters

theC	the value to set.

References impl.

Referenced by update().

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◆ setTheT()

void ome::xml::model::Plane::setTheT ( const ome::xml::model::primitives::NonNegativeInteger & theT )

Set the TheT property.

Parameters

theT	the value to set.

References impl.

Referenced by update().

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◆ setTheZ()

void ome::xml::model::Plane::setTheZ ( const ome::xml::model::primitives::NonNegativeInteger & theZ )

Set the TheZ property.

Parameters

theZ	the value to set.

References impl.

Referenced by update().

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◆ sizeOfLinkedAnnotationList()

OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type ome::xml::model::Plane::sizeOfLinkedAnnotationList ( ) const

Get size of linked Annotation list.

Returns: the size of the list.

References impl.

◆ unlinkAnnotation()

bool ome::xml::model::Plane::unlinkAnnotation ( const std::shared_ptr< ome::xml::model::Annotation > & annotation )

Unlink Annotation.

Parameters

annotation the Annotation to unlink.

Returns: true if the Annotation was unlinked, otherwise false if the Annotation was not linked and could hence not be unlinked.

Todo:

Does the return value serve any useful purpose? Is this also inherited Java API?

Doesn't the removal break the indexing?

Does the removal deal with multiple instances; we aren't preventing duplicates on insertion.

References impl.

◆ update()

void ome::xml::model::Plane::update	(	const common::xml::dom::Element &	element,
		ome::xml::model::OMEModel &	model
	)

virtual

Update the object hierarchy recursively from an XML DOM tree.

Note: No properties are removed, only added or updated.

Parameters

element	root of the XML DOM tree to from which to construct the model object graph.
model	handler for the OME model used to track instances and references seen during the update.

Exceptions

EnumerationException if there is an error instantiating an enumeration during model object creation, or ModelException if there are any consistency or validity errors found during processing.

Implements ome::xml::model::OMEModelObject.

References ome::xml::model::OMEModel::addReference(), ome::common::xml::dom::Element::getAttribute(), ome::xml::model::detail::OMEModelObject::getChildrenByTagName(), ome::common::xml::dom::Element::getTagName(), ome::common::xml::dom::Element::hasAttribute(), ome::xml::model::detail::OMEModelObject::logger, setDeltaT(), setExposureTime(), setHashSHA1(), setPositionX(), setPositionY(), setPositionZ(), setTheC(), setTheT(), setTheZ(), ome::xml::model::detail::OMEModelObject::update(), and validElementName().

◆ validElementName()

bool ome::xml::model::Plane::validElementName ( const std::string & name ) const

virtual

Check if a given element name is valid for processing by this model object.

Used for processing nodes when interitance is involved.

Parameters

name	the element name to check.

Returns: true if valid, false if invalid.

Deprecated:: Always returns true since any element name is now regarded as being valid.

Implements ome::xml::model::detail::OMEModelObject.

Referenced by update().

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The documentation for this class was generated from the following files:

ome/xml/model/Plane.h
ome/xml/model/Plane.cpp

Classes

Public Member Functions

Static Public Member Functions

Protected Member Functions

Private Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ Plane()

Member Function Documentation

◆ asXMLElementInternal()

◆ create()

◆ elementName()

◆ getDeltaT() [1/2]

◆ getDeltaT() [2/2]

◆ getExposureTime() [1/2]

◆ getExposureTime() [2/2]

◆ getHashSHA1() [1/2]

◆ getHashSHA1() [2/2]

◆ getLinkedAnnotation()

◆ getLinkedAnnotationList()

◆ getPixels() [1/2]

◆ getPixels() [2/2]

◆ getPositionX() [1/2]

◆ getPositionX() [2/2]

◆ getPositionY() [1/2]

◆ getPositionY() [2/2]

◆ getPositionZ() [1/2]

◆ getPositionZ() [2/2]

◆ getTheC()

◆ getTheT()

◆ getTheZ()

◆ getXMLNamespace()

◆ link()

◆ linkAnnotation()

◆ setDeltaT()

◆ setExposureTime()

◆ setHashSHA1()

◆ setLinkedAnnotation()

◆ setPixels()

◆ setPositionX()

◆ setPositionY()

◆ setPositionZ()

◆ setTheC()

◆ setTheT()

◆ setTheZ()

◆ sizeOfLinkedAnnotationList()

◆ unlinkAnnotation()

◆ update()

◆ validElementName()