FakeReader¶
This page lists supported metadata fields for the Bio-Formats Simulated data format reader.
These fields are from the OME data model. Bio-Formats standardizes each format’s original metadata to and from the OME data model so that you can work with a particular piece of metadata (e.g. physical width of the image in microns) in a format-independent way.
- Of the 476 fields documented in the metadata summary table:
- The file format itself supports 89 of them (18%).
- Of those, Bio-Formats fully or partially converts 89 (100%).
Supported fields¶
- These fields are fully supported by the Bio-Formats Simulated data format reader:
- BooleanAnnotation : ID
- BooleanAnnotation : Namespace
- BooleanAnnotation : Value
- Channel : Color
- Channel : ID
- Channel : SamplesPerPixel
- CommentAnnotation : ID
- CommentAnnotation : Namespace
- CommentAnnotation : Value
- DoubleAnnotation : ID
- DoubleAnnotation : Namespace
- DoubleAnnotation : Value
- Ellipse : ID
- Ellipse : RadiusX
- Ellipse : RadiusY
- Ellipse : X
- Ellipse : Y
- Image : AcquisitionDate
- Image : AnnotationRef
- Image : ID
- Image : Name
- Image : ROIRef
- Label : ID
- Label : Text
- Label : X
- Label : Y
- Line : ID
- Line : X1
- Line : X2
- Line : Y1
- Line : Y2
- LongAnnotation : ID
- LongAnnotation : Namespace
- LongAnnotation : Value
- Mask : BinData
- Mask : BinDataBigEndian
- Mask : Height
- Mask : ID
- Mask : Width
- Mask : X
- Mask : Y
- Pixels : BigEndian
- Pixels : DimensionOrder
- Pixels : ID
- Pixels : Interleaved
- Pixels : PhysicalSizeX
- Pixels : PhysicalSizeY
- Pixels : PhysicalSizeZ
- Pixels : SignificantBits
- Pixels : SizeC
- Pixels : SizeT
- Pixels : SizeX
- Pixels : SizeY
- Pixels : SizeZ
- Pixels : Type
- Plane : ExposureTime
- Plane : PositionX
- Plane : PositionY
- Plane : PositionZ
- Plane : TheC
- Plane : TheT
- Plane : TheZ
- Point : ID
- Point : X
- Point : Y
- Polygon : ID
- Polygon : Points
- Polyline : ID
- Polyline : Points
- ROI : ID
- Rectangle : Height
- Rectangle : ID
- Rectangle : Width
- Rectangle : X
- Rectangle : Y
- TagAnnotation : ID
- TagAnnotation : Namespace
- TagAnnotation : Value
- TermAnnotation : ID
- TermAnnotation : Namespace
- TermAnnotation : Value
- TimestampAnnotation : ID
- TimestampAnnotation : Namespace
- TimestampAnnotation : Value
- WellSample : PositionX
- WellSample : PositionY
- XMLAnnotation : ID
- XMLAnnotation : Namespace
- XMLAnnotation : Value
Total supported: 89
Total unknown or missing: 387
