BDReader¶
This page lists supported metadata fields for the Bio-Formats BD Pathway format reader.
These fields are from the OME data model. Bio-Formats standardizes each format’s original metadata to and from the OME data model so that you can work with a particular piece of metadata (e.g. physical width of the image in microns) in a format-independent way.
- Of the 476 fields documented in the metadata summary table:
- The file format itself supports 57 of them (11%).
- Of those, Bio-Formats fully or partially converts 57 (100%).
Supported fields¶
- These fields are fully supported by the Bio-Formats BD Pathway format reader:
- Channel : EmissionWavelength
- Channel : ExcitationWavelength
- Channel : ID
- Channel : Name
- Channel : SamplesPerPixel
- Detector : ID
- DetectorSettings : Binning
- DetectorSettings : Gain
- DetectorSettings : ID
- DetectorSettings : Offset
- Image : AcquisitionDate
- Image : ID
- Image : InstrumentRef
- Image : Name
- Image : ROIRef
- Instrument : ID
- Objective : ID
- Objective : LensNA
- Objective : Manufacturer
- Objective : NominalMagnification
- ObjectiveSettings : ID
- Pixels : BigEndian
- Pixels : DimensionOrder
- Pixels : ID
- Pixels : Interleaved
- Pixels : SignificantBits
- Pixels : SizeC
- Pixels : SizeT
- Pixels : SizeX
- Pixels : SizeY
- Pixels : SizeZ
- Pixels : Type
- Plane : DeltaT
- Plane : ExposureTime
- Plane : TheC
- Plane : TheT
- Plane : TheZ
- Plate : ColumnNamingConvention
- Plate : Description
- Plate : ID
- Plate : Name
- Plate : RowNamingConvention
- PlateAcquisition : ID
- PlateAcquisition : MaximumFieldCount
- PlateAcquisition : WellSampleRef
- ROI : ID
- Rectangle : Height
- Rectangle : ID
- Rectangle : Width
- Rectangle : X
- Rectangle : Y
- Well : Column
- Well : ID
- Well : Row
- WellSample : ID
- WellSample : ImageRef
- WellSample : Index
Total supported: 57
Total unknown or missing: 419
