Note

This documentation is for OMERO 5.2. This version is now in maintenance mode and will only be updated in the event of critical bugs or security concerns. OMERO 5.3 is expected before the end of 2016.

Server administration

Server start

Once your database has been properly configured and your config profile is set to use that database, you are ready to start your server using the omero admin start command:

$ bin/omero admin start

This command performs the following operations in order:

1. rewrites the configuration files if --force-rewrite is passed or the server has never been started
2. checks the server status, i.e. pings the master node using the IceGrid administration tool
3. aborts the command if a server is running
4. rewrites the configuration files if it has not been done at step 1
5. starts the server
6. waits until the server is up

Most configuration files under etc/grid are generated using the templates under etc/grid/templates and the server configuration stored in etc/grid/config.xml. The rewriting step updates the JVM memory settings (see Memory configuration) and the server ports (see Ports) based on the server configuration.

-h, --help

Display the help for this subcommand.

--foreground

This option is particularly useful for debugging and maintenance and allows for starting the server up in the foreground, that is without creating a daemon on UNIX-like systems or service on Windows. During the lifetime of the server, the prompt from which it was launched will be blocked.

--force-rewrite

This option forces the server configuration files under etc/grid to be rewritten before the status of the server is checked.

Server stop

To stop a running server, you can invoke the omero admin stop subcommand:

$ bin/omero admin stop

This command does the following operations in order:

1. rewrites the server configuration files if --force-rewrite is passed
2. checks the server status, i.e. pings the master node using the IceGrid administration tool
3. aborts the command if no server is running
4. stops the server
5. waits until the server is down

-h, --help

Display the help for this subcommand.

--force-rewrite

This option forces the configuration files to be rewritten before the server status is checked.

Server restart

To stop and start the server in a single command, you can use the omero admin restart command:

$ bin/omero admin restart

The restart subcommand supports the same options as omero admin start.

Server diagnostics

To debug a server or inspect the configuration, you can use the omero admin diagnostics command:

$ bin/omero admin diagnostics

The output of this command will report information about:

• the server prerequisites (psql, java)
• the server environment variables
• the server memory settings and ports
• the status of the binary repository