Package ome.services.projection

Class ProjectionBean

java.lang.Object

ome.logic.AbstractLevel2Service

ome.services.projection.ProjectionBean

All Implemented Interfaces:

ome.api.IProjection, ome.api.ServiceInterface, ome.system.SelfConfigurableService

@Transactional(readOnly=true)
public class ProjectionBean
extends AbstractLevel2Service
implements ome.api.IProjection

Implements projection functionality for Pixels sets as declared in IProjection.

Since:

OMERO-Beta3.1

Field Summary

Fields

Modifier and Type	Field	Description
protected ome.api.IPixels	iPixels	Reference to the service used to retrieve the pixels metadata.
protected ome.io.nio.PixelsService	pixelsService	Reference to the service used to retrieve the pixels data.

Fields inherited from class ome.logic.AbstractLevel2Service

iQuery, iUpdate, metadata, queryFactory, readOnlyStatus, sec

Fields inherited from interface ome.api.IProjection

MAXIMUM_INTENSITY, MEAN_INTENSITY, METHODOLOGY_STRINGS, SUM_INTENSITY

Constructor Summary

Constructors

Constructor	Description
ProjectionBean()

Method Summary

Modifier and Type	Method	Description
java.lang.Class<? extends ome.api.ServiceInterface>	getServiceInterface()	Returns the interface this implementation is for.
long	projectPixels(long pixelsId, ome.model.enums.PixelsType pixelsType, int algorithm, int tStart, int tEnd, java.util.List<java.lang.Integer> channels, int stepping, int zStart, int zEnd, java.lang.String name)
byte[]	projectStack(long pixelsId, ome.model.enums.PixelsType pixelsType, int algorithm, int timepoint, int channelIndex, int stepping, int start, int end)
void	setIPixels(ome.api.IPixels iPixels)	IPixels bean injector.
void	setPixelsService(ome.io.nio.PixelsService pixelsService)	PixelsService bean injector.

Methods inherited from class ome.logic.AbstractLevel2Service

getBeanHelper, getExtendedMetadata, getQueryFactory, getSecuritySystem, selfConfigure, setExtendedMetadata, setQueryFactory, setQueryService, setReadOnlyStatus, setSecuritySystem, setUpdateService

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

iPixels

protected transient ome.api.IPixels iPixels

Reference to the service used to retrieve the pixels metadata.

pixelsService

protected transient ome.io.nio.PixelsService pixelsService

Reference to the service used to retrieve the pixels data.

Constructor Detail

ProjectionBean

public ProjectionBean()

Method Detail

getServiceInterface

public java.lang.Class<? extends ome.api.ServiceInterface> getServiceInterface()

Returns the interface this implementation is for.

Specified by:

getServiceInterface in interface ome.system.SelfConfigurableService

See Also:

SelfConfigurableService.getServiceInterface()

setIPixels

public void setIPixels(ome.api.IPixels iPixels)

IPixels bean injector. For use during configuration. Can only be called once.

setPixelsService

public void setPixelsService(ome.io.nio.PixelsService pixelsService)

PixelsService bean injector. For use during configuration. Can only be called once.

projectStack

public byte[] projectStack(long pixelsId,
                           ome.model.enums.PixelsType pixelsType,
                           int algorithm,
                           int timepoint,
                           int channelIndex,
                           int stepping,
                           int start,
                           int end)

Specified by:

projectStack in interface ome.api.IProjection

projectPixels

@Transactional(readOnly=false)
public long projectPixels(long pixelsId,
                          ome.model.enums.PixelsType pixelsType,
                          int algorithm,
                          int tStart,
                          int tEnd,
                          java.util.List<java.lang.Integer> channels,
                          int stepping,
                          int zStart,
                          int zEnd,
                          java.lang.String name)

Specified by:

projectPixels in interface ome.api.IProjection