All Classes

Class	Description
AbstractChecksumProvider	Abstract skeleton class implementing ChecksumProvider and providing implementations of the interface methods using a universal checksum class object.
Adler32ChecksumProviderImpl	An implementation of the ChecksumProvider interface using Adler32 as the message digest algorithm.
AnnotationUtils	Checks metadata constraints on API calls.
ApiConstraintChecker	Checks metadata constraints on API calls.
ChecksumProvider	An interface producing checksums or message digests (depending on the implementing class) of a given type of input.
ChecksumProviderFactory	A factory producing throw-away objects of the ChecksumProvider type.
ChecksumProviderFactoryImpl	An implementation of the ChecksumProviderFactory interface.
ChecksumType	Enumeration defining the possible algorithms used for calculating checksums.
CodomainMap	Declares the interface common to all codomain maps.
CodomainMapContext	Each concrete subclass defines transformation parameters for a CodomainMap implementation.
ContrastStretchingContext	Two points pStart and pEnd define the context of this transformation.
Counter	Thin wrapper around Counter
CRC32ChecksumProviderImpl	An implementation of the ChecksumProvider interface using CRC32 as the message digest algorithm.
DefaultCounter	Thin wrapper around Counter
DefaultHistogram	Thin wrapper around Histogram
DefaultMetrics	Spring bean for configuring metrics in this JVM.
DefaultSnapshot	Thin wrapper around Snapshot
DefaultTimer	Thin wrapper around Timer
DefaultTimer.Context
EventContext	manages authenticated principals and other context for a given event.
FileSizeChecksumProviderImpl	Trivial checksum provider whose hash is simply the number of bytes that were put into the calculation.
Hidden	annotation which specifies that a method parameter (e.g.
Histogram	Thin wrapper around Histogram
IAdmin	Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions.
IAnalysis	Provides access to the model objects involved in analysis.
IConfig	Access to server configuration.
IContainer	Provides methods for dealing with the core "Pojos" of OME.
IDelete	Provides simplifed methods for deleting instances from the database.
IdentityMapContext	An empty context for the identity map.
ILdap	Administration interface providing access to admin-only functionality as well as JMX-based server access and selected user functions.
IMetadata	Provides method to interact with acquisition metadata and annotations.
InternalMessage	Message which can be published via OmeroContext.publishEvent(ApplicationEvent) or OmeroContext.publishMessage(InternalMessage).
InvalidQueryException	Exception to indicate that the query string was invalid
IPixels	Metadata gateway for the RenderingEngine and clients.
IProjection	Provides methods for performing projections of Pixels sets.
IQuery	Provides methods for directly querying object graphs.
IRenderingSettings	Provides method to apply rendering settings to a collection of images.
IRepositoryInfo	Provides methods for obtaining information for server repository disk space allocation.
IScale	Provides methods for performing scaling (change of the image size through interpolation or other means) on BufferedImages.
ISession	Start here: Session creation service for OMERO.
IShare	Deprecated.
ITypes	Access to reflective type information.
IUpdate	Provides methods for directly updating object graphs.
JobHandle	Allows submission of asynchronous jobs.
Login	Provides simplified handling of login properties when creating a ServiceFactory.
LuceneQueryBuilder	Utility class for building lucene queries Example: Fields to search for: 'name', 'description' Input query: a b AND c AND d f will be transformed to this lucene expression: name:a description:a name:f description:f ((name:b description:b) AND (name:c description:c) AND (name:d description:d))
LutProvider	Interface for lookup table providers.
LutReader	Class to be extended by LUT reader.
LutReaderFactory	Initializes the reader corresponding to the specified lookup table.
MD5ChecksumProviderImpl	An implementation of the ChecksumProvider interface using MD5 as the message digest algorithm.
MessageException	Message which wraps a Throwable instance since OmeroContext.publishEvent(org.springframework.context.ApplicationEvent) cannot throw a checked exception.
Metrics	Thin-interface around MetricSet.
Murmur128ChecksumProviderImpl	An implementation of the ChecksumProvider interface using Murmur3_128 as the hash algorithm.
Murmur32ChecksumProviderImpl	An implementation of the ChecksumProvider interface using Murmur3_32 as the hash algorithm.
NotNull	annotation used for determining the types of a Set
NullMetrics	No-op version of Metrics
OmeroContext	Provides static access for the creation of singleton and non-singleton application contexts.
OmeroContext.Locator	provides access to the protected methods of ContextSingletonBeanFactoryLocator which cannot be used externally.
PermitAll	Security annotation which allows a method to be called by all users regardless of their status.
PlaneDef	Identifies a 2D-plane in the XYZ moving frame of the 3D stack.
PlaneSlicingContext	We consider that the image is composed of eight 1-bit planes ranging from bit-plane 0 for the least significant bit to bit-plane 7 for the most significant bit.
Preference	Definition of a server configuration variable ("preference") along with its mutability, visibility, aliases and other important information.
Preference.Visibility
PreferenceContext	Central configuration for OMERO properties from (in order): Any injected Properties instances Java System.getProperties() Any configured property files As of OMERO 4.2, server configurations are not stored in Java's Preferences API but in an IceGrid xml file under etc/grid of the server installation.
Principal	implementation of Principal.
RawFileStore	Raw file gateway which provides access to the OMERO file repository.
RawPixelsStore	Binary data provider.
RegionDef	Identifies a rectangular region.
RenderingEngine	Defines a service to render a given pixels set.
ReverseIntensityContext	Deprecated. This class will be renamed to InverseIntensityContext (or similar) in future versions
RGBAIntBuffer	Holds the data of an RGBA image.
RGBBuffer	Holds the data of an RGB image.
RGBIntBuffer	Holds the data of an RGB image.
Roles	encapsulates the naming scheme for critical system groups and accounts.
RolesAllowed	Security annotation which specifies a list of user roles which will be permitted to execute this method.
Search	Central search interface, allowing Web2.0 style queries.
SelfConfigurableService
Server	Provides simplified handling of server properties when creating a ServiceFactory.
ServiceFactory	Entry point for all client calls.
ServiceInterface	Marker interface representing an OMERO API Interface.
SessionInitializer	Manages the creation of a single Session created via the injected ISession service.
SHA1ChecksumProviderImpl	An implementation of the ChecksumProvider interface using SHA1 as the secure hash algorithm.
ShutdownMessage	Published when the server is shutting down.
SiftingWhileRejectingDefaultAppender
SimpleEventContext	simple, non-thread-safe, serializable EventContext
Snapshot	Thin wrapper around Snapshot
StatefulServiceInterface	OMERO API Interface with stateful semantics.
ThumbnailStore	Provides methods for dealing with thumbnails.
Timer	Thin wrapper around Timer
Timer.Context
UpgradeCheck	Contacts a given URL which should be an OME server which will return either an empty String or a URL which points to a needed upgrade.
UserSignalMessage	Published if the Posix USR1 or USR2 signal is received.
Validate	annotation used for determining the types of a Set