Package ome.services.blitz.measurements

Interface OmeroMeasurementStore

  • All Known Implementing Classes:
    MeasurementStore
    public interface OmeroMeasurementStore
    Sub-interface of MeasurementStore with extended life-cycle methods for handling exceptions during saving the measurements to multiple stores.
    Since:
    Beta4.1

    • Method Summary

      All Methods Instance Methods Abstract Methods 
      Modifier and Type Method Description
      void addCircle​(java.lang.String roiLsid, double x, double y, double r)  
      void addObject​(java.lang.String lsid, ome.model.IObject object)  
      void addObjects​(java.util.Map<java.lang.String,​ome.model.IObject> objects)  
      void addRows​(java.lang.Object[][] rows)
      Adds an array of rows (Object[]) to the store.
      java.util.List<java.lang.Long> getRoiIds()
      Returns the ids of all Roi instances created during the save method.
      TablePrx getTable()
      Returns the Table proxy which is in use by this service.
      void initialize​(java.lang.String[] headers, java.lang.String[] idTypes, java.lang.Class[] types, java.util.Map<java.lang.String,​java.lang.Object> metadata)  
      void save()  

    • Method Detail

      • initialize

        void initialize​(java.lang.String[] headers,
                java.lang.String[] idTypes,
                java.lang.Class[] types,
                java.util.Map<java.lang.String,​java.lang.Object> metadata)
         throws java.lang.Exception
        Throws:
        java.lang.Exception

      • addRows

        void addRows​(java.lang.Object[][] rows)
      throws java.lang.Exception
        Adds an array of rows (Object[]) to the store. These rows might be indexed by an LSID which correlates to an added ROI. For each call to addRows(Object[][]) a call to save() must be made. This allows a single measurement store to be filled with the values from multiple measurement files. To differentiate between the various files, include a File lsid column during the initialization phase.
        Parameters:
        rows -
        Throws:
        java.lang.Exception

      • addCircle

        void addCircle​(java.lang.String roiLsid,
               double x,
               double y,
               double r)
        throws java.lang.Exception
        Throws:
        java.lang.Exception

      • save

        void save()
   throws java.lang.Exception
        Throws:
        java.lang.Exception

      • addObject

        void addObject​(java.lang.String lsid,
               ome.model.IObject object)

      • addObjects

        void addObjects​(java.util.Map<java.lang.String,​ome.model.IObject> objects)

      • getRoiIds

        java.util.List<java.lang.Long> getRoiIds()
        Returns the ids of all Roi instances created during the save method. If Roi creation failed or if save() has not been called, this will return null.

      • getTable

        TablePrx getTable()
        Returns the Table proxy which is in use by this service.
        Returns:
        See above.