ome-xml  5.6.0
Dataset.h
1 /*
2  * #%L
3  * OME-XML C++ library for working with OME-XML metadata structures.
4  * %%
5  * Copyright © 2006 - 2016 Open Microscopy Environment:
6  * - Massachusetts Institute of Technology
7  * - National Institutes of Health
8  * - University of Dundee
9  * - Board of Regents of the University of Wisconsin-Madison
10  * - Glencoe Software, Inc.
11  * %%
12  * Redistribution and use in source and binary forms, with or without
13  * modification, are permitted provided that the following conditions are met:
14  *
15  * 1. Redistributions of source code must retain the above copyright notice,
16  * this list of conditions and the following disclaimer.
17  * 2. Redistributions in binary form must reproduce the above copyright notice,
18  * this list of conditions and the following disclaimer in the documentation
19  * and/or other materials provided with the distribution.
20  *
21  * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
22  * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
23  * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
24  * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE
25  * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
26  * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
27  * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS
28  * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN
29  * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
30  * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
31  * POSSIBILITY OF SUCH DAMAGE.
32  *
33  * The views and conclusions contained in the software and documentation are
34  * those of the authors and should not be interpreted as representing official
35  * policies, either expressed or implied, of any organization.
36  * #L%
37  */
38 
39 /*─────────────────────────────────────────────────────────────────────────────
40  *
41  * THIS IS AUTOMATICALLY GENERATED CODE. DO NOT MODIFY.
42  *
43  *─────────────────────────────────────────────────────────────────────────────
44  */
45 
46 #ifndef OME_XML_MODEL_DATASET_H
47 #define OME_XML_MODEL_DATASET_H
48 
49 #include <algorithm>
50 #include <list>
51 #include <stdexcept>
52 #include <string>
53 #include <vector>
54 
55 #include <ome/common/log.h>
56 
57 #include <ome/common/xml/dom/Document.h>
58 #include <ome/common/xml/dom/Element.h>
59 #include <ome/common/xml/dom/Node.h>
60 
61 #include <ome/xml/model/primitives/Quantity.h>
62 
63 #include <ome/xml/model/Experimenter.h>
64 #include <ome/xml/model/ExperimenterGroup.h>
65 #include <ome/xml/model/detail/OMEModelObject.h>
66 
67 namespace ome
68 {
69  namespace xml
70  {
71  namespace model
72  {
73 
74  // Forward declarations.
75  class Annotation;
76  class Image;
77  class OMEModel;
78  class Project;
79 
84  {
85  private:
86  class Impl;
88  std::shared_ptr<Impl> impl;
89 
90  public:
92  Dataset();
93 
99  Dataset (const Dataset& copy);
100 
102  virtual
103  ~Dataset ();
104 
119  static std::shared_ptr<Dataset>
120  create(const common::xml::dom::Element& element,
122 
123  // Documented in superclass.
124  const std::string&
125  elementName() const;
126 
127  // Documented in superclass.
128  bool
129  validElementName(const std::string& name) const;
130 
132  Dataset&
133  operator= (const Dataset&) = delete;
135 
136  // -- OMEModelObject API methods --
137 
139  virtual void
140  update(const common::xml::dom::Element& element,
142 
143  public:
144  // -- Dataset API methods --
145 
147  bool
148  link (std::shared_ptr<Reference>& reference,
149  std::shared_ptr<ome::xml::model::OMEModelObject>& object);
150 
156  std::shared_ptr<std::string>
157  getName ();
158 
164  const std::shared_ptr<std::string>
165  getName () const;
166 
172  void
173  setName (std::shared_ptr<std::string>& name);
174 
180  const std::string&
181  getID () const;
182 
188  void
189  setID (const std::string& id);
190 
196  std::shared_ptr<std::string>
197  getDescription ();
198 
204  const std::shared_ptr<std::string>
205  getDescription () const;
206 
212  void
213  setDescription (std::shared_ptr<std::string>& description);
214 
221  std::weak_ptr<ome::xml::model::Experimenter>
223 
230  const std::weak_ptr<ome::xml::model::Experimenter>
231  getLinkedExperimenter () const;
232 
238  void
239  linkExperimenter (std::shared_ptr<ome::xml::model::Experimenter>& experimenter);
240 
250  void
251  unlinkExperimenter (std::shared_ptr<ome::xml::model::Experimenter>& experimenter);
252 
259  std::weak_ptr<ome::xml::model::ExperimenterGroup>
261 
268  const std::weak_ptr<ome::xml::model::ExperimenterGroup>
270 
276  void
277  linkExperimenterGroup (std::shared_ptr<ome::xml::model::ExperimenterGroup>& experimenterGroup);
278 
288  void
289  unlinkExperimenterGroup (std::shared_ptr<ome::xml::model::ExperimenterGroup>& experimenterGroup);
290 
297  sizeOfLinkedImageList () const;
298 
305  getLinkedImageList () const;
306 
314  const std::weak_ptr<ome::xml::model::Image>&
316 
327  const std::weak_ptr<ome::xml::model::Image>&
329  const std::shared_ptr<ome::xml::model::Image>& image);
330 
341  bool
342  linkImage (const std::shared_ptr<ome::xml::model::Image>& image);
343 
359  bool
360  unlinkImage (const std::shared_ptr<ome::xml::model::Image>& image);
361 
369 
376  getLinkedAnnotationList () const;
377 
385  const std::weak_ptr<ome::xml::model::Annotation>&
387 
398  const std::weak_ptr<ome::xml::model::Annotation>&
400  const std::shared_ptr<ome::xml::model::Annotation>& annotation);
401 
412  bool
413  linkAnnotation (const std::shared_ptr<ome::xml::model::Annotation>& annotation);
414 
430  bool
431  unlinkAnnotation (const std::shared_ptr<ome::xml::model::Annotation>& annotation);
432 
439  sizeOfLinkedProjectList () const;
440 
447  getLinkedProjectList () const;
448 
456  const std::weak_ptr<ome::xml::model::Project>&
458 
469  const std::weak_ptr<ome::xml::model::Project>&
471  const std::shared_ptr<ome::xml::model::Project>& project_BackReference);
472 
483  bool
484  linkProject (const std::shared_ptr<ome::xml::model::Project>& project_BackReference);
485 
501  bool
502  unlinkProject (const std::shared_ptr<ome::xml::model::Project>& project_BackReference);
503 
504  protected:
505  // Documented in base class.
506  virtual void
508  common::xml::dom::Element& element) const;
509 
510  public:
511  // Documented in superclass.
512  const std::string&
513  getXMLNamespace() const;
514  };
515 
516  }
517  }
518 }
519 
520 #endif // OME_XML_MODEL_DATASET_H
521 
522 /*
523  * Local Variables:
524  * mode:C++
525  * End:
526  */
OME model interface (abstract top-level container)
Definition: OMEModel.h:61
Private implementation details of Dataset model object.
Definition: Dataset.cpp:79
bool unlinkProject(const std::shared_ptr< ome::xml::model::Project > &project_BackReference)
Unlink Project.
Definition: Dataset.cpp:653
bool link(std::shared_ptr< Reference > &reference, std::shared_ptr< ome::xml::model::OMEModelObject > &object)
Link a given OME model object to this model object.
Definition: Dataset.cpp:309
const std::weak_ptr< ome::xml::model::Annotation > & setLinkedAnnotation(OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type index, const std::shared_ptr< ome::xml::model::Annotation > &annotation)
Set linked Annotation.
Definition: Dataset.cpp:570
OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type getLinkedAnnotationList() const
Get the linked Annotation list.
Definition: Dataset.cpp:558
const std::weak_ptr< ome::xml::model::Image > & setLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type index, const std::shared_ptr< ome::xml::model::Image > &image)
Set linked Image.
Definition: Dataset.cpp:510
std::weak_ptr< ome::xml::model::ExperimenterGroup > getLinkedExperimenterGroup()
Get linked ExperimenterGroup.
Definition: Dataset.cpp:463
OMEModelObject::indexed_container< ome::xml::model::Project, std::weak_ptr >::type::size_type sizeOfLinkedProjectList() const
Get size of linked Project list.
Definition: Dataset.cpp:612
void setDescription(std::shared_ptr< std::string > &description)
Set the Description property.
Definition: Dataset.cpp:427
OMEModelObject::indexed_container< ome::xml::model::Project, std::weak_ptr >::type getLinkedProjectList() const
Get the linked Project list.
Definition: Dataset.cpp:618
const std::weak_ptr< ome::xml::model::Project > & setLinkedProject(OMEModelObject::indexed_container< ome::xml::model::Project, std::weak_ptr >::type::size_type index, const std::shared_ptr< ome::xml::model::Project > &project_BackReference)
Set linked Project.
Definition: Dataset.cpp:630
std::shared_ptr< std::string > getDescription()
Get the Description property.
Definition: Dataset.cpp:413
boost::multi_index_container< Ptr< T >, boost::multi_index::indexed_by< boost::multi_index::random_access<>, boost::multi_index::ordered_unique< boost::multi_index::identity< Ptr< T > >, std::owner_less< Ptr< T > > > > > type
Multi-index container type.
Definition: OMEModelObject.h:93
OME model object (concrete implementation).
Definition: OMEModelObject.h:64
virtual void asXMLElementInternal(common::xml::dom::Document &document, common::xml::dom::Element &element) const
Transform the object hierarchy rooted at this element to XML.
Definition: Dataset.cpp:669
OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type sizeOfLinkedImageList() const
Get size of linked Image list.
Definition: Dataset.cpp:492
void unlinkExperimenter(std::shared_ptr< ome::xml::model::Experimenter > &experimenter)
Unlink Experimenter.
Definition: Dataset.cpp:453
std::shared_ptr< Impl > impl
Private implementation details.
Definition: Dataset.h:86
static std::shared_ptr< Dataset > create(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Create a Dataset model object from DOM element.
Definition: Dataset.cpp:195
std::shared_ptr< std::string > getName()
Get the Name property.
Definition: Dataset.cpp:378
void linkExperimenter(std::shared_ptr< ome::xml::model::Experimenter > &experimenter)
Link Experimenter.
Definition: Dataset.cpp:447
Multi-index container for efficient ordered insertion and deletion of model object references...
Definition: OMEModelObject.h:84
Dataset()
Default constructor.
Definition: Dataset.cpp:171
Open Microscopy Environment C++ implementation.
bool linkProject(const std::shared_ptr< ome::xml::model::Project > &project_BackReference)
Link Project.
Definition: Dataset.cpp:640
virtual SKIP void update(const common::xml::dom::Element &element, ome::xml::model::OMEModel &model)
Update the object hierarchy recursively from an XML DOM tree.
Definition: Dataset.cpp:217
const std::weak_ptr< ome::xml::model::Project > & getLinkedProject(OMEModelObject::indexed_container< ome::xml::model::Project, std::weak_ptr >::type::size_type index) const
Get linked Project.
Definition: Dataset.cpp:624
const std::string & getID() const
Get the ID property.
Definition: Dataset.cpp:399
void unlinkExperimenterGroup(std::shared_ptr< ome::xml::model::ExperimenterGroup > &experimenterGroup)
Unlink ExperimenterGroup.
Definition: Dataset.cpp:482
OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type getLinkedImageList() const
Get the linked Image list.
Definition: Dataset.cpp:498
bool unlinkAnnotation(const std::shared_ptr< ome::xml::model::Annotation > &annotation)
Unlink Annotation.
Definition: Dataset.cpp:594
bool linkAnnotation(const std::shared_ptr< ome::xml::model::Annotation > &annotation)
Link Annotation.
Definition: Dataset.cpp:580
virtual ~Dataset()
Destructor.
Definition: Dataset.cpp:190
Dataset model object.
Definition: Dataset.h:83
bool unlinkImage(const std::shared_ptr< ome::xml::model::Image > &image)
Unlink Image.
Definition: Dataset.cpp:534
const std::weak_ptr< ome::xml::model::Annotation > & getLinkedAnnotation(OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type index) const
Get linked Annotation.
Definition: Dataset.cpp:564
bool linkImage(const std::shared_ptr< ome::xml::model::Image > &image)
Link Image.
Definition: Dataset.cpp:520
const std::string & getXMLNamespace() const
Get the XML namespace for this model object.
Definition: Dataset.cpp:784
std::weak_ptr< ome::xml::model::Experimenter > getLinkedExperimenter()
Get linked Experimenter.
Definition: Dataset.cpp:434
void linkExperimenterGroup(std::shared_ptr< ome::xml::model::ExperimenterGroup > &experimenterGroup)
Link ExperimenterGroup.
Definition: Dataset.cpp:476
void setID(const std::string &id)
Set the ID property.
Definition: Dataset.cpp:406
const std::string & elementName() const
Get the element name of this model object.
Definition: Dataset.cpp:204
void setName(std::shared_ptr< std::string > &name)
Set the Name property.
Definition: Dataset.cpp:392
bool validElementName(const std::string &name) const
Check if a given element name is valid for processing by this model object.
Definition: Dataset.cpp:211
const std::weak_ptr< ome::xml::model::Image > & getLinkedImage(OMEModelObject::indexed_container< ome::xml::model::Image, std::weak_ptr >::type::size_type index) const
Get linked Image.
Definition: Dataset.cpp:504
OMEModelObject::indexed_container< ome::xml::model::Annotation, std::weak_ptr >::type::size_type sizeOfLinkedAnnotationList() const
Get size of linked Annotation list.
Definition: Dataset.cpp:552