ome-files  0.5.0
ome::files::detail::FormatReader Member List

This is the complete list of members for ome::files::detail::FormatReader, including all inherited members.

ome::assertId(const boost::optional< boost::filesystem::path > &id, bool notNull=true)ome::files::FormatHandlerinlinestatic
ome::files::FormatHandler::assertId(const boost::optional< boost::filesystem::path > &id, bool notNull=true)ome::files::FormatHandlerinlinestatic
CAN_GROUP enum valueome::files::FormatReader
CANNOT_GROUP enum valueome::files::FormatReader
ome::checkSuffix(const boost::filesystem::path &name, const boost::filesystem::path &suffix)ome::files::FormatHandlerinlinestatic
ome::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes)ome::files::FormatHandlerinlinestatic
ome::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes, const std::vector< boost::filesystem::path > &compression_suffixes)ome::files::FormatHandlerinlinestatic
ome::files::FormatHandler::checkSuffix(const boost::filesystem::path &name, const boost::filesystem::path &suffix)ome::files::FormatHandlerinlinestatic
ome::files::FormatHandler::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes)ome::files::FormatHandlerinlinestatic
ome::files::FormatHandler::checkSuffix(const boost::filesystem::path &name, const std::vector< boost::filesystem::path > &suffixes, const std::vector< boost::filesystem::path > &compression_suffixes)ome::files::FormatHandlerinlinestatic
close(bool fileOnly=false)ome::files::detail::FormatReadervirtual
companionFilesome::files::detail::FormatReaderprotected
coreome::files::detail::FormatReaderprotected
coreIndexome::files::detail::FormatReadermutableprotected
coreIndexToSeries(dimension_size_type index) constome::files::detail::FormatReadervirtual
coremetadata_list_type typedefome::files::detail::FormatReaderprotected
currentIdome::files::detail::FormatReaderprotected
datasetDescriptionome::files::detail::FormatReaderprotected
domainsome::files::detail::FormatReaderprotected
fileGroupOption(const std::string &id)ome::files::detail::FormatReadervirtual
FileGroupOption enum nameome::files::FormatReader
filterMetadataome::files::detail::FormatReaderprotected
flattenedResolutionsome::files::detail::FormatReaderprotected
ome::FormatHandler()ome::files::FormatHandlerinlineprotected
ome::files::FormatHandler::FormatHandler()ome::files::FormatHandlerinlineprotected
FormatReader(const ReaderProperties &)ome::files::detail::FormatReaderprotected
ome::files::FormatReader::FormatReader()ome::files::FormatReaderinlineprotected
getAdvancedSeriesUsedFiles(bool noPixels=false) constome::files::detail::FormatReadervirtual
getAdvancedUsedFiles(bool noPixels=false) constome::files::detail::FormatReadervirtual
getBitsPerPixel() constome::files::detail::FormatReadervirtual
getCompressionSuffixes() constome::files::detail::FormatReadervirtual
getCoreIndex() constome::files::detail::FormatReadervirtual
getCoreMetadata(dimension_size_type index) constome::files::detail::FormatReaderinlineprotected
getCoreMetadata(dimension_size_type index)ome::files::detail::FormatReaderinlineprotected
getCoreMetadataList() constome::files::detail::FormatReadervirtual
getCurrentFile() constome::files::detail::FormatReadervirtual
getDatasetStructureDescription() constome::files::detail::FormatReadervirtual
getDimensionOrder() constome::files::detail::FormatReadervirtual
getDomains() constome::files::detail::FormatReadervirtual
getEffectiveSizeC() constome::files::detail::FormatReadervirtual
getFormat() constome::files::detail::FormatReadervirtual
getFormatDescription() constome::files::detail::FormatReadervirtual
getGlobalMetadata() constome::files::detail::FormatReadervirtual
getImageCount() constome::files::detail::FormatReadervirtual
getIndex(dimension_size_type z, dimension_size_type c, dimension_size_type t) constome::files::detail::FormatReadervirtual
getIndex(dimension_size_type z, dimension_size_type c, dimension_size_type t, dimension_size_type moduloZ, dimension_size_type moduloC, dimension_size_type moduloT) constome::files::detail::FormatReadervirtual
getLookupTable(dimension_size_type plane, VariantPixelBuffer &buf) constome::files::detail::FormatReadervirtual
getMetadataOptions() constome::files::detail::FormatReadervirtual
getMetadataOptions()ome::files::detail::FormatReadervirtual
getMetadataStore() constome::files::detail::FormatReadervirtual
getMetadataStore()ome::files::detail::FormatReadervirtual
getMetadataValue(const std::string &field) constome::files::detail::FormatReadervirtual
getModuloC()ome::files::detail::FormatReadervirtual
getModuloC() constome::files::detail::FormatReadervirtual
getModuloT()ome::files::detail::FormatReadervirtual
getModuloT() constome::files::detail::FormatReadervirtual
getModuloZ()ome::files::detail::FormatReadervirtual
getModuloZ() constome::files::detail::FormatReadervirtual
getOptimalTileHeight(dimension_size_type channel) constome::files::detail::FormatReadervirtual
getOptimalTileHeight() constome::files::detail::FormatReadervirtual
getOptimalTileWidth(dimension_size_type channel) constome::files::detail::FormatReadervirtual
getOptimalTileWidth() constome::files::detail::FormatReadervirtual
getPixelType() constome::files::detail::FormatReadervirtual
getPlane() constome::files::detail::FormatReadervirtual
getPossibleDomains(const std::string &id) constome::files::detail::FormatReadervirtual
getRequiredDirectories(const std::vector< std::string > &files) constome::files::detail::FormatReadervirtual
getResolution() constome::files::detail::FormatReadervirtual
getResolutionCount() constome::files::detail::FormatReadervirtual
getRGBChannelCount(dimension_size_type channel) constome::files::detail::FormatReadervirtual
getSeries() constome::files::detail::FormatReadervirtual
getSeriesCount() constome::files::detail::FormatReadervirtual
getSeriesMetadata() constome::files::detail::FormatReadervirtual
getSeriesMetadataValue(const MetadataMap::key_type &field) constome::files::detail::FormatReadervirtual
getSeriesUsedFiles(bool noPixels=false) constome::files::detail::FormatReadervirtual
getSizeC() constome::files::detail::FormatReadervirtual
getSizeT() constome::files::detail::FormatReadervirtual
getSizeX() constome::files::detail::FormatReadervirtual
getSizeY() constome::files::detail::FormatReadervirtual
getSizeZ() constome::files::detail::FormatReadervirtual
getSuffixes() constome::files::detail::FormatReadervirtual
getSupportedMetadataLevels()ome::files::detail::FormatReadervirtual
getThumbSize() constome::files::detail::FormatReaderprotected
getThumbSizeX() constome::files::detail::FormatReadervirtual
getThumbSizeY() constome::files::detail::FormatReadervirtual
getUnderlyingReaders() constome::files::detail::FormatReadervirtual
getUsedFiles(bool noPixels=false) constome::files::detail::FormatReadervirtual
getZCTCoords(dimension_size_type index) constome::files::detail::FormatReadervirtual
getZCTModuloCoords(dimension_size_type index) constome::files::detail::FormatReadervirtual
groupome::files::detail::FormatReaderprotected
hasCompanionFiles() constome::files::detail::FormatReadervirtual
hasFlattenedResolutions() constome::files::detail::FormatReadervirtual
inome::files::detail::FormatReaderprotected
indexedAsRGBome::files::detail::FormatReaderprotected
initFile(const boost::filesystem::path &id)ome::files::detail::FormatReaderprotectedvirtual
isFalseColor() constome::files::detail::FormatReadervirtual
isFilenameThisTypeImpl(const boost::filesystem::path &name) constome::files::detail::FormatReaderprotectedvirtual
isGroupFiles() constome::files::detail::FormatReadervirtual
isIndexed() constome::files::detail::FormatReadervirtual
isInterleaved() constome::files::detail::FormatReadervirtual
isInterleaved(dimension_size_type subC) constome::files::detail::FormatReadervirtual
isLittleEndian() constome::files::detail::FormatReadervirtual
isMetadataComplete() constome::files::detail::FormatReadervirtual
isMetadataFiltered() constome::files::detail::FormatReadervirtual
isNormalized() constome::files::detail::FormatReadervirtual
isOrderCertain() constome::files::detail::FormatReadervirtual
isOriginalMetadataPopulated() constome::files::detail::FormatReadervirtual
isRGB(dimension_size_type channel) constome::files::detail::FormatReadervirtual
isSingleFile(const boost::filesystem::path &id) constome::files::detail::FormatReadervirtual
isStreamThisTypeImpl(std::istream &stream) constome::files::detail::FormatReaderprotectedvirtual
isThisType(const boost::filesystem::path &name, bool open=true) constome::files::detail::FormatReadervirtual
isThisType(const uint8_t *begin, std::size_t length) constome::files::detail::FormatReadervirtual
isThisType(const uint8_t *begin, const uint8_t *end) constome::files::detail::FormatReadervirtual
isThisType(std::istream &stream) constome::files::detail::FormatReadervirtual
isThumbnailSeries() constome::files::detail::FormatReadervirtual
isUsedFile(const boost::filesystem::path &file)ome::files::detail::FormatReaderprotectedvirtual
makeFilterMetadata()ome::files::detail::FormatReaderprotectedvirtual
metadataome::files::detail::FormatReaderprotected
MetadataConfigurable()ome::files::MetadataConfigurableprotected
metadataOptionsome::files::detail::FormatReaderprotected
metadataStoreome::files::detail::FormatReaderprotected
MUST_GROUP enum valueome::files::FormatReader
normalizeDataome::files::detail::FormatReaderprotected
openBytes(dimension_size_type plane, VariantPixelBuffer &buf) constome::files::detail::FormatReadervirtual
openBytes(dimension_size_type plane, VariantPixelBuffer &buf, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h) constome::files::detail::FormatReadervirtual
openBytesImpl(dimension_size_type plane, VariantPixelBuffer &buf, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h) const =0ome::files::detail::FormatReaderprotectedpure virtual
openThumbBytes(dimension_size_type plane, VariantPixelBuffer &buf) constome::files::detail::FormatReadervirtual
planeome::files::detail::FormatReadermutableprotected
readerPropertiesome::files::detail::FormatReaderprotected
readPlane(std::istream &source, VariantPixelBuffer &dest, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h, dimension_size_type samples)ome::files::detail::FormatReaderprotectedvirtual
readPlane(std::istream &source, VariantPixelBuffer &dest, dimension_size_type x, dimension_size_type y, dimension_size_type w, dimension_size_type h, dimension_size_type scanlinePad, dimension_size_type samples)ome::files::detail::FormatReaderprotectedvirtual
resolutionome::files::detail::FormatReadermutableprotected
saveOriginalMetadataome::files::detail::FormatReaderprotected
seriesome::files::detail::FormatReadermutableprotected
seriesToCoreIndex(dimension_size_type series) constome::files::detail::FormatReadervirtual
setCoreIndex(dimension_size_type index) constome::files::detail::FormatReadervirtual
setFlattenedResolutions(bool flatten)ome::files::detail::FormatReadervirtual
setGroupFiles(bool group)ome::files::detail::FormatReadervirtual
setId(const boost::filesystem::path &id)ome::files::detail::FormatReadervirtual
setMetadataFiltered(bool filter)ome::files::detail::FormatReadervirtual
setMetadataOptions(const MetadataOptions &options)ome::files::detail::FormatReadervirtual
setMetadataStore(std::shared_ptr<::ome::xml::meta::MetadataStore > &store)ome::files::detail::FormatReadervirtual
setNormalized(bool normalize)ome::files::detail::FormatReadervirtual
setOriginalMetadataPopulated(bool populate)ome::files::detail::FormatReadervirtual
setPlane(dimension_size_type plane) constome::files::detail::FormatReadervirtual
setResolution(dimension_size_type resolution) constome::files::detail::FormatReadervirtual
setSeries(dimension_size_type series) constome::files::detail::FormatReadervirtual
suffixNecessaryome::files::detail::FormatReaderprotected
suffixSufficientome::files::detail::FormatReaderprotected
~FormatHandler()ome::files::FormatHandlerinlinevirtual
~FormatReader()ome::files::detail::FormatReadervirtual
~MetadataConfigurable()ome::files::MetadataConfigurablevirtual