OIRReader¶
This page lists supported metadata fields for the Bio-Formats Olympus OIR format reader.
These fields are from the OME data model. Bio-Formats standardizes each format’s original metadata to and from the OME data model so that you can work with a particular piece of metadata (e.g. physical width of the image in microns) in a format-independent way.
- Of the 476 fields documented in the metadata summary table:
- The file format itself supports 46 of them (9%).
- Of those, Bio-Formats fully or partially converts 46 (100%).
Supported fields¶
- These fields are fully supported by the Bio-Formats Olympus OIR format reader:
- Channel : Color
- Channel : EmissionWavelength
- Channel : ExcitationWavelength
- Channel : ID
- Channel : LightSourceSettingsID
- Channel : Name
- Channel : PinholeSize
- Channel : SamplesPerPixel
- Detector : Gain
- Detector : ID
- Detector : Offset
- Detector : Voltage
- DetectorSettings : ID
- Image : AcquisitionDate
- Image : ID
- Image : InstrumentRef
- Image : Name
- Instrument : ID
- Laser : ID
- Laser : Model
- Laser : Wavelength
- Objective : ID
- Objective : Immersion
- Objective : LensNA
- Objective : Model
- Objective : NominalMagnification
- Objective : WorkingDistance
- ObjectiveSettings : ID
- ObjectiveSettings : RefractiveIndex
- Pixels : BigEndian
- Pixels : DimensionOrder
- Pixels : ID
- Pixels : Interleaved
- Pixels : PhysicalSizeX
- Pixels : PhysicalSizeY
- Pixels : PhysicalSizeZ
- Pixels : SignificantBits
- Pixels : SizeC
- Pixels : SizeT
- Pixels : SizeX
- Pixels : SizeY
- Pixels : SizeZ
- Pixels : Type
- Plane : TheC
- Plane : TheT
- Plane : TheZ
Total supported: 46
Total unknown or missing: 430