******************************************************************************* ICSReader ******************************************************************************* This page lists supported metadata fields for the Bio-Formats Image Cytometry Standard format reader. These fields are from the :model_doc:`OME data model <>`. Bio-Formats standardizes each format's original metadata to and from the OME data model so that you can work with a particular piece of metadata (e.g. physical width of the image in microns) in a format-independent way. Of the 476 fields documented in the :doc:`metadata summary table </metadata-summary>`: * The file format itself supports 72 of them (15%). * Of those, Bio-Formats fully or partially converts 72 (100%). Supported fields =============================================================================== These fields are fully supported by the Bio-Formats Image Cytometry Standard format reader: * :schema:`Channel : EmissionWavelength <OME-2016-06/ome_xsd.html#Channel_EmissionWavelength>` * :schema:`Channel : ExcitationWavelength <OME-2016-06/ome_xsd.html#Channel_ExcitationWavelength>` * :schema:`Channel : ID <OME-2016-06/ome_xsd.html#Channel_ID>` * :schema:`Channel : Name <OME-2016-06/ome_xsd.html#Channel_Name>` * :schema:`Channel : PinholeSize <OME-2016-06/ome_xsd.html#Channel_PinholeSize>` * :schema:`Channel : SamplesPerPixel <OME-2016-06/ome_xsd.html#Channel_SamplesPerPixel>` * :schema:`Detector : ID <OME-2016-06/ome_xsd.html#Detector_ID>` * :schema:`Detector : Manufacturer <OME-2016-06/ome_xsd.html#ManufacturerSpec_Manufacturer>` * :schema:`Detector : Model <OME-2016-06/ome_xsd.html#ManufacturerSpec_Model>` * :schema:`Detector : Type <OME-2016-06/ome_xsd.html#Detector_Type>` * :schema:`DetectorSettings : Gain <OME-2016-06/ome_xsd.html#DetectorSettings_Gain>` * :schema:`DetectorSettings : ID <OME-2016-06/ome_xsd.html#DetectorSettings_ID>` * :schema:`Dichroic : ID <OME-2016-06/ome_xsd.html#Dichroic_ID>` * :schema:`Dichroic : Model <OME-2016-06/ome_xsd.html#ManufacturerSpec_Model>` * :schema:`Experiment : ID <OME-2016-06/ome_xsd.html#Experiment_ID>` * :schema:`Experiment : Type <OME-2016-06/ome_xsd.html#Experiment_Type>` * :schema:`Experimenter : ID <OME-2016-06/ome_xsd.html#Experimenter_ID>` * :schema:`Experimenter : LastName <OME-2016-06/ome_xsd.html#Experimenter_LastName>` * :schema:`Filter : ID <OME-2016-06/ome_xsd.html#Filter_ID>` * :schema:`Filter : Model <OME-2016-06/ome_xsd.html#ManufacturerSpec_Model>` * :schema:`FilterSet : DichroicRef <OME-2016-06/ome_xsd.html#DichroicRef_ID>` * :schema:`FilterSet : EmissionFilterRef <OME-2016-06/ome_xsd.html#FilterRef_ID>` * :schema:`FilterSet : ExcitationFilterRef <OME-2016-06/ome_xsd.html#FilterRef_ID>` * :schema:`FilterSet : ID <OME-2016-06/ome_xsd.html#FilterSet_ID>` * :schema:`FilterSet : Model <OME-2016-06/ome_xsd.html#ManufacturerSpec_Model>` * :schema:`Image : AcquisitionDate <OME-2016-06/ome_xsd.html#Image_AcquisitionDate>` * :schema:`Image : Description <OME-2016-06/ome_xsd.html#Image_Description>` * :schema:`Image : ID <OME-2016-06/ome_xsd.html#Image_ID>` * :schema:`Image : InstrumentRef <OME-2016-06/ome_xsd.html#InstrumentRef_ID>` * :schema:`Image : Name <OME-2016-06/ome_xsd.html#Image_Name>` * :schema:`Instrument : ID <OME-2016-06/ome_xsd.html#Instrument_ID>` * :schema:`Laser : ID <OME-2016-06/ome_xsd.html#LightSource_ID>` * :schema:`Laser : LaserMedium <OME-2016-06/ome_xsd.html#Laser_LaserMedium>` * :schema:`Laser : Manufacturer <OME-2016-06/ome_xsd.html#ManufacturerSpec_Manufacturer>` * :schema:`Laser : Model <OME-2016-06/ome_xsd.html#ManufacturerSpec_Model>` * :schema:`Laser : Power <OME-2016-06/ome_xsd.html#LightSource_Power>` * :schema:`Laser : RepetitionRate <OME-2016-06/ome_xsd.html#Laser_RepetitionRate>` * :schema:`Laser : Type <OME-2016-06/ome_xsd.html#Laser_Type>` * :schema:`Laser : Wavelength <OME-2016-06/ome_xsd.html#Laser_Wavelength>` * :schema:`Microscope : Manufacturer <OME-2016-06/ome_xsd.html#ManufacturerSpec_Manufacturer>` * :schema:`Microscope : Model <OME-2016-06/ome_xsd.html#ManufacturerSpec_Model>` * :schema:`Objective : CalibratedMagnification <OME-2016-06/ome_xsd.html#Objective_CalibratedMagnification>` * :schema:`Objective : Correction <OME-2016-06/ome_xsd.html#Objective_Correction>` * :schema:`Objective : ID <OME-2016-06/ome_xsd.html#Objective_ID>` * :schema:`Objective : Immersion <OME-2016-06/ome_xsd.html#Objective_Immersion>` * :schema:`Objective : LensNA <OME-2016-06/ome_xsd.html#Objective_LensNA>` * :schema:`Objective : Model <OME-2016-06/ome_xsd.html#ManufacturerSpec_Model>` * :schema:`Objective : WorkingDistance <OME-2016-06/ome_xsd.html#Objective_WorkingDistance>` * :schema:`ObjectiveSettings : ID <OME-2016-06/ome_xsd.html#ObjectiveSettings_ID>` * :schema:`Pixels : BigEndian <OME-2016-06/ome_xsd.html#Pixels_BigEndian>` * :schema:`Pixels : DimensionOrder <OME-2016-06/ome_xsd.html#Pixels_DimensionOrder>` * :schema:`Pixels : ID <OME-2016-06/ome_xsd.html#Pixels_ID>` * :schema:`Pixels : Interleaved <OME-2016-06/ome_xsd.html#Pixels_Interleaved>` * :schema:`Pixels : PhysicalSizeX <OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeX>` * :schema:`Pixels : PhysicalSizeY <OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeY>` * :schema:`Pixels : PhysicalSizeZ <OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeZ>` * :schema:`Pixels : SignificantBits <OME-2016-06/ome_xsd.html#Pixels_SignificantBits>` * :schema:`Pixels : SizeC <OME-2016-06/ome_xsd.html#Pixels_SizeC>` * :schema:`Pixels : SizeT <OME-2016-06/ome_xsd.html#Pixels_SizeT>` * :schema:`Pixels : SizeX <OME-2016-06/ome_xsd.html#Pixels_SizeX>` * :schema:`Pixels : SizeY <OME-2016-06/ome_xsd.html#Pixels_SizeY>` * :schema:`Pixels : SizeZ <OME-2016-06/ome_xsd.html#Pixels_SizeZ>` * :schema:`Pixels : TimeIncrement <OME-2016-06/ome_xsd.html#Pixels_TimeIncrement>` * :schema:`Pixels : Type <OME-2016-06/ome_xsd.html#Pixels_Type>` * :schema:`Plane : DeltaT <OME-2016-06/ome_xsd.html#Plane_DeltaT>` * :schema:`Plane : ExposureTime <OME-2016-06/ome_xsd.html#Plane_ExposureTime>` * :schema:`Plane : PositionX <OME-2016-06/ome_xsd.html#Plane_PositionX>` * :schema:`Plane : PositionY <OME-2016-06/ome_xsd.html#Plane_PositionY>` * :schema:`Plane : PositionZ <OME-2016-06/ome_xsd.html#Plane_PositionZ>` * :schema:`Plane : TheC <OME-2016-06/ome_xsd.html#Plane_TheC>` * :schema:`Plane : TheT <OME-2016-06/ome_xsd.html#Plane_TheT>` * :schema:`Plane : TheZ <OME-2016-06/ome_xsd.html#Plane_TheZ>` **Total supported: 72** **Total unknown or missing: 404**