******************************************************************************* GatanReader ******************************************************************************* This page lists supported metadata fields for the Bio-Formats Gatan Digital Micrograph format reader. These fields are from the :model_doc:`OME data model <>`. Bio-Formats standardizes each format's original metadata to and from the OME data model so that you can work with a particular piece of metadata (e.g. physical width of the image in microns) in a format-independent way. Of the 476 fields documented in the :doc:`metadata summary table </metadata-summary>`: * The file format itself supports 69 of them (14%). * Of those, Bio-Formats fully or partially converts 69 (100%). Supported fields =============================================================================== These fields are fully supported by the Bio-Formats Gatan Digital Micrograph format reader: * :schema:`Channel : AcquisitionMode <OME-2016-06/ome_xsd.html#Channel_AcquisitionMode>` * :schema:`Channel : ID <OME-2016-06/ome_xsd.html#Channel_ID>` * :schema:`Channel : SamplesPerPixel <OME-2016-06/ome_xsd.html#Channel_SamplesPerPixel>` * :schema:`Detector : ID <OME-2016-06/ome_xsd.html#Detector_ID>` * :schema:`DetectorSettings : ID <OME-2016-06/ome_xsd.html#DetectorSettings_ID>` * :schema:`DetectorSettings : Voltage <OME-2016-06/ome_xsd.html#DetectorSettings_Voltage>` * :schema:`Ellipse : FontSize <OME-2016-06/ome_xsd.html#Shape_FontSize>` * :schema:`Ellipse : ID <OME-2016-06/ome_xsd.html#Shape_ID>` * :schema:`Ellipse : RadiusX <OME-2016-06/ome_xsd.html#Ellipse_RadiusX>` * :schema:`Ellipse : RadiusY <OME-2016-06/ome_xsd.html#Ellipse_RadiusY>` * :schema:`Ellipse : StrokeColor <OME-2016-06/ome_xsd.html#Shape_StrokeColor>` * :schema:`Ellipse : Text <OME-2016-06/ome_xsd.html#Shape_Text>` * :schema:`Ellipse : X <OME-2016-06/ome_xsd.html#Ellipse_X>` * :schema:`Ellipse : Y <OME-2016-06/ome_xsd.html#Ellipse_Y>` * :schema:`Image : AcquisitionDate <OME-2016-06/ome_xsd.html#Image_AcquisitionDate>` * :schema:`Image : ID <OME-2016-06/ome_xsd.html#Image_ID>` * :schema:`Image : InstrumentRef <OME-2016-06/ome_xsd.html#InstrumentRef_ID>` * :schema:`Image : Name <OME-2016-06/ome_xsd.html#Image_Name>` * :schema:`Image : ROIRef <OME-2016-06/ome_xsd.html#ROIRef_ID>` * :schema:`Instrument : ID <OME-2016-06/ome_xsd.html#Instrument_ID>` * :schema:`Label : FontSize <OME-2016-06/ome_xsd.html#Shape_FontSize>` * :schema:`Label : ID <OME-2016-06/ome_xsd.html#Shape_ID>` * :schema:`Label : StrokeColor <OME-2016-06/ome_xsd.html#Shape_StrokeColor>` * :schema:`Label : Text <OME-2016-06/ome_xsd.html#Shape_Text>` * :schema:`Label : X <OME-2016-06/ome_xsd.html#Label_X>` * :schema:`Label : Y <OME-2016-06/ome_xsd.html#Label_Y>` * :schema:`Line : FontSize <OME-2016-06/ome_xsd.html#Shape_FontSize>` * :schema:`Line : ID <OME-2016-06/ome_xsd.html#Shape_ID>` * :schema:`Line : StrokeColor <OME-2016-06/ome_xsd.html#Shape_StrokeColor>` * :schema:`Line : Text <OME-2016-06/ome_xsd.html#Shape_Text>` * :schema:`Line : X1 <OME-2016-06/ome_xsd.html#Line_X1>` * :schema:`Line : X2 <OME-2016-06/ome_xsd.html#Line_X2>` * :schema:`Line : Y1 <OME-2016-06/ome_xsd.html#Line_Y1>` * :schema:`Line : Y2 <OME-2016-06/ome_xsd.html#Line_Y2>` * :schema:`Objective : Correction <OME-2016-06/ome_xsd.html#Objective_Correction>` * :schema:`Objective : ID <OME-2016-06/ome_xsd.html#Objective_ID>` * :schema:`Objective : Immersion <OME-2016-06/ome_xsd.html#Objective_Immersion>` * :schema:`Objective : NominalMagnification <OME-2016-06/ome_xsd.html#Objective_NominalMagnification>` * :schema:`ObjectiveSettings : ID <OME-2016-06/ome_xsd.html#ObjectiveSettings_ID>` * :schema:`Pixels : BigEndian <OME-2016-06/ome_xsd.html#Pixels_BigEndian>` * :schema:`Pixels : DimensionOrder <OME-2016-06/ome_xsd.html#Pixels_DimensionOrder>` * :schema:`Pixels : ID <OME-2016-06/ome_xsd.html#Pixels_ID>` * :schema:`Pixels : Interleaved <OME-2016-06/ome_xsd.html#Pixels_Interleaved>` * :schema:`Pixels : PhysicalSizeX <OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeX>` * :schema:`Pixels : PhysicalSizeY <OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeY>` * :schema:`Pixels : PhysicalSizeZ <OME-2016-06/ome_xsd.html#Pixels_PhysicalSizeZ>` * :schema:`Pixels : SignificantBits <OME-2016-06/ome_xsd.html#Pixels_SignificantBits>` * :schema:`Pixels : SizeC <OME-2016-06/ome_xsd.html#Pixels_SizeC>` * :schema:`Pixels : SizeT <OME-2016-06/ome_xsd.html#Pixels_SizeT>` * :schema:`Pixels : SizeX <OME-2016-06/ome_xsd.html#Pixels_SizeX>` * :schema:`Pixels : SizeY <OME-2016-06/ome_xsd.html#Pixels_SizeY>` * :schema:`Pixels : SizeZ <OME-2016-06/ome_xsd.html#Pixels_SizeZ>` * :schema:`Pixels : Type <OME-2016-06/ome_xsd.html#Pixels_Type>` * :schema:`Plane : ExposureTime <OME-2016-06/ome_xsd.html#Plane_ExposureTime>` * :schema:`Plane : PositionX <OME-2016-06/ome_xsd.html#Plane_PositionX>` * :schema:`Plane : PositionY <OME-2016-06/ome_xsd.html#Plane_PositionY>` * :schema:`Plane : PositionZ <OME-2016-06/ome_xsd.html#Plane_PositionZ>` * :schema:`Plane : TheC <OME-2016-06/ome_xsd.html#Plane_TheC>` * :schema:`Plane : TheT <OME-2016-06/ome_xsd.html#Plane_TheT>` * :schema:`Plane : TheZ <OME-2016-06/ome_xsd.html#Plane_TheZ>` * :schema:`ROI : ID <OME-2016-06/ome_xsd.html#ROI_ID>` * :schema:`Rectangle : FontSize <OME-2016-06/ome_xsd.html#Shape_FontSize>` * :schema:`Rectangle : Height <OME-2016-06/ome_xsd.html#Rectangle_Height>` * :schema:`Rectangle : ID <OME-2016-06/ome_xsd.html#Shape_ID>` * :schema:`Rectangle : StrokeColor <OME-2016-06/ome_xsd.html#Shape_StrokeColor>` * :schema:`Rectangle : Text <OME-2016-06/ome_xsd.html#Shape_Text>` * :schema:`Rectangle : Width <OME-2016-06/ome_xsd.html#Rectangle_Width>` * :schema:`Rectangle : X <OME-2016-06/ome_xsd.html#Rectangle_X>` * :schema:`Rectangle : Y <OME-2016-06/ome_xsd.html#Rectangle_Y>` **Total supported: 69** **Total unknown or missing: 407**