ScanrReader

This page lists supported metadata fields for the Bio-Formats Olympus ScanR format reader.

These fields are from the OME data model. Bio-Formats standardizes each format’s original metadata to and from the OME data model so that you can work with a particular piece of metadata (e.g. physical width of the image in microns) in a format-independent way.

Of the 476 fields documented in the metadata summary table:

• The file format itself supports 43 of them (9%).
• Of those, Bio-Formats fully or partially converts 43 (100%).

Supported fields

These fields are fully supported by the Bio-Formats Olympus ScanR format reader:

• Channel : ID
• Channel : Name
• Channel : SamplesPerPixel
• Image : AcquisitionDate
• Image : ID
• Image : Name
• Pixels : BigEndian
• Pixels : DimensionOrder
• Pixels : ID
• Pixels : Interleaved
• Pixels : PhysicalSizeX
• Pixels : PhysicalSizeY
• Pixels : SignificantBits
• Pixels : SizeC
• Pixels : SizeT
• Pixels : SizeX
• Pixels : SizeY
• Pixels : SizeZ
• Pixels : Type
• Plane : DeltaT
• Plane : ExposureTime
• Plane : PositionX
• Plane : PositionY
• Plane : TheC
• Plane : TheT
• Plane : TheZ
• Plate : ColumnNamingConvention
• Plate : Columns
• Plate : ID
• Plate : Name
• Plate : RowNamingConvention
• Plate : Rows
• PlateAcquisition : ID
• PlateAcquisition : MaximumFieldCount
• PlateAcquisition : WellSampleRef
• Well : Column
• Well : ID
• Well : Row
• WellSample : ID
• WellSample : ImageRef
• WellSample : Index
• WellSample : PositionX
• WellSample : PositionY

Total supported: 43

Total unknown or missing: 433